Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateTue Oct 3 16:16:01 BST 2017
Rank34Aligned Residues210
% Identity24%Templatec2hpwA_
PDB info PDB header:luminescent proteinChain: A: PDB Molecule:green fluorescent protein; PDBTitle: green fluorescent protein from clytia gregaria
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
Predicted Secondary structure 






















Query SS confidence 



























































Query Sequence  SVIAKQMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQC
Query Conservation        
  
  
 
 



 
 
 
 
 
 
  
    
  









 




  
Alig confidence 













































.












Template Conservation   

 
 
     


 



 
 
 
 
 
 
  
    
  



. 



 


    
Template Sequence  KLFEKEIPYITELEGDVEGMKFIIKGEGTGDATTGTIKAKYICTTG. DLPVPWATILSSL
Template Known Secondary structure  TTSS
TTTTTTTTS.S
SS
TTT
Template Predicted Secondary structure 













.




Template SS confidence 



























































   910.........20.........30.........40.........50.... .....60.......
 
   62.......70.........80.........90.........100.........110.........120.
Predicted Secondary structure 






















Query SS confidence 



























































Query Sequence  QYGSIPFTKYPEDIPDYVKQSFPEGYTWERIMNFEDGAVCTVSNDSSIQGNCFIYHVKFS
Query Conservation   

   
 


  
 



 






 


  





 
     

    
       
Alig confidence 

...






















































Template Conservation   
... 
 


  
 



   
 


 


  




  
     
             
Template Sequence  VF. . . CFAKYPRHIADFFKSTQPDGYSQDRIISFDNDGQYDVKAKVTYENGTLYNRVTVK
Template Known Secondary structure 
G...GGSB

TTS

TTTT
TTS
TT
Template Predicted Secondary structure  ...

















Template SS confidence 



























































   71. .......80.........90.........100.........110.........120.......
 
   122.......130....... ..140......... 150.........160.........170........
Predicted Secondary structure 













.




..





Query SS confidence 















.











. .




























Query Sequence  GLNFPPNGPVMQKKTQ. GWEPNTERLFAR. . DGMLLGNNFMALKLEGGGHYLCEFKTTYK
Query Conservation 
 


 






   .  


 
   
 ..

 
 
       
 


       


 
Alig confidence 















.











..




























Template Conservation 
 


 




  
 
    
     

    
 
       
    

       
 

Template Sequence  GTGFKSNGNILGMRVLYHSPPHAVYILPDRKNGGMKIEYNKAFDVMGGGHQMARHAQFNK
Template Known Secondary structure  S

TTSTTTTT
B
S



GGGTBTTS
Template Predicted Secondary structure 

























Template SS confidence 



























































   128.130.........140.........150.........160.........170.........180.......
 
   179 180.........190.........200.... .....210.....
Predicted Secondary structure  ..













..
Query SS confidence 
. .
























. .










Query Sequence  A. . KKPVKMPGYHYVDRKLDVTNHNKDY. . TSVEQCEISIA
Query Conservation   .. 


  
  


  
        
 ..  
   
 
 
Alig confidence 
..
























..










Template Conservation 
        
  


   
   

      


   
   
Template Sequence  PLGAWEEDYPLYHHLTVWTSFGKDPDDDETDHLTIVEVIKA
Template Known Secondary structure  SS







S

TT
SSS
Template Predicted Secondary structure 


















Template SS confidence 








































   188.190.........200.........210.........220........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D