Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateTue Oct 3 16:16:01 BST 2017
Rank46Aligned Residues203
% Identity26%Templatec3ai5A_
PDB info PDB header:fluorescent protein, transcriptionChain: A: PDB Molecule:yeast enhanced green fluorescent protein,ubiquitin; PDBTitle: crystal structure of yeast enhanced green fluorescent protein-2 ubiquitin fusion protein
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60......
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Query Sequence  QMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQCQYGSI
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Template Sequence  VVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTG. KLPVPWPTLVTTFVQC. .
Template Known Secondary structure  TTGGGTTTS.S
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GGGGTTT

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   11........20.........30.........40.........50. ........60.......
 
   67..70...... ...80.........90.........100.........110.........120....
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Query Sequence  PFTKYPEDIP. . DYVKQSFPEGYTWERIMNFEDGAVCTVSNDSSIQGNCFIYHVKFSGLN
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Template Sequence  . FARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGID
Template Known Secondary structure  .G
B

GGGGGG
TTTT
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   71........80.........90.........100.........110.........120.........
 
   125....130.........140.........150 .........160.........170... .....
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Query Sequence  FPPNGPVMQKKTQGWEPNTERLFARD. . . . GMLLGNNFMALKLEGGGHYLCEF. . KTTYK
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Template Sequence  FKEDGNILGHKL. EYNYNSHNVYIMADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPI
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TTSTTTTT
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TTTTBTTS
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   130.........140. ........150.........160.........170.........180........
 
   179180.........190.. .......200.........210....
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Query Sequence  AKKPVKMPGYHYVD. . . RKLDVTNHNKDYTSVEQCEISI
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Template Sequence  GDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAA
Template Known Secondary structure  SSS





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   189190.........200.........210.........220.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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