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Job Description | Undefined | Confidence | 41.40% | Date | Tue Oct 3 16:16:01 BST 2017 |
Rank | 72 | Aligned Residues | 70 |
% Identity | 13% | Template | c3riqA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:tailspike protein; |
PDBTitle: siphovirus 9na tailspike receptor binding domain
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Resolution | 1.50 Å |
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Query SS confidence |   |
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Query Sequence |   |
S | V | I | A | K | . |
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Q | M | T | Y | K | V | Y | M | S | G | T | V | N | G | H | Y | F | E | V | E | G | D | G | K | G | K | P | Y | E | G | E | Q | T | V | K | L | T | V | T | K | G | G | P | L | P | F | A | W | D | I | L | S | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | T | I | N | P | S | L | V | L | T | A | D | C | Q | V | A | S | P | G | N | E | A | S | I | V | K | L | S | A | I | Q | D | G | A | R | V | G | E | L | Q | L | N | R | L | G | F | K | H | M | S | I | P | V | A | E | S | Q | L | P | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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579 | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . |
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60 | . | . | . | . | . | . | . | . | . | 70 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Q | C | Q | Y | G | S | I | P | F | T | K | Y |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | A | L | E | F | N | S | S | I | G | F | F |
Template Known Secondary structure |   |
G | G |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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639 | 640 | . | . | . | . | . | . | . | . | . | 650 |
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No model constructed - rank, confidence too low
Phyre is for non-commercial use only
Commercial users please contact Michael Sternberg
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis |
Kelley LA et al. Nature Protocols
10, 845-858 (2015)
[paper]
[Citation
link] |
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