Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateTue Oct 3 16:16:01 BST 2017
Rank36Aligned Residues207
% Identity26%Templatec4xbiA_
PDB info PDB header:chaperoneChain: A: PDB Molecule:clpb protein, putative,green fluorescent protein; PDBTitle: structure of a malarial protein involved in proteostasis
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60..
Predicted Secondary structure 






















Query SS confidence 



























































Query Sequence  VIAKQMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQCQ
Query Conservation       
  
  
 
 



 
 
 
 
 
 
  
    
  









 




   
Alig confidence 












































.













Template Conservation             
 
 



 
   
 
 
    
          
. 


    
     
Template Sequence  LFTGVVPILVELDGDVNGHKFSVRGEGEGDATNGKLTLKFICTTG. KLPVPWPTLVTTLV
Template Known Secondary structure  GGSS
TTGGGTTTS.S
SS
GGGGTTT

Template Predicted Secondary structure 














.




Template SS confidence 



























































   156...160.........170.........180.........190.........200 .........210....
 
   63......70...... ...80.........90.........100.........110.........120
Predicted Secondary structure 











..









Query SS confidence 













. .











































Query Sequence  YGSIPFTKYPEDIP. . DYVKQSFPEGYTWERIMNFEDGAVCTVSNDSSIQGNCFIYHVKF
Query Conservation 

   
 


  
 ..



 






 


  





 
     

    
      
Alig confidence 
...









..











































Template Conservation   ... 
  

  
   
 

   
 

   

  




                     
Template Sequence  Q. . . CFSRYPDHMKRHDFFKSAMPEGYVQERTISFKDDGTYKTRAEVKFEGDTLVNRIEL
Template Known Secondary structure  G...GGSB

GGGGGG
TTTT
TTS
TT
Template Predicted Secondary structure  ...

















Template SS confidence 



























































   218 .220.........230.........240.........250.........260.........270....
 
   121........130.........140....... ..150.........160.........170... ..
Predicted Secondary structure 


















...





..
Query SS confidence 


























. . .

























. .

Query Sequence  SGLNFPPNGPVMQKKTQGWEPNTERLF. . . ARDGMLLGNNFMALKLEGGGHYLCEF. . KT
Query Conservation   
 


 






     


 
   ...
 

 
 
       
 


      .. 
Alig confidence 


























...

























..

Template Conservation   
  

 




                       
           

           
Template Sequence  KGIDFKEDGNILGHKLEYNFNSHNVYITADKQKNGIKANFKIRHNVEDGSVQLADHYQQN
Template Known Secondary structure  S

TTSTTTTT
B
S



GGGTBTTS
Template Predicted Secondary structure 































Template SS confidence 



























































   275....280.........290.........300.........310.........320.........330....
 
   176...180.........190....... ..200.........210.....
Predicted Secondary structure 








...




Query SS confidence 





















. . .

















Query Sequence  TYKAKKPVKMPGYHYVDRKLDV. . . TNHNKDYTSVEQCEISIA
Query Conservation 

   


  
  


  
   ...     
   
   
 
 
Alig confidence 





















...






..








Template Conservation         
  
  
          
     
 ..    
   
Template Sequence  TPIGDGPVLLPDNHYLSTQSVLSKDPNEKRDH. . MVLLEFVTA
Template Known Secondary structure  SSSS





S

TT

SS..
Template Predicted Secondary structure 

















..
Template SS confidence 










































   335....340.........350.........360...... ...370.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D