Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateTue Oct 3 16:16:01 BST 2017
Rank31Aligned Residues209
% Identity24%Templated1oxda_
SCOP infoGFP-like GFP-like Fluorescent proteins
Resolution1.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
Predicted Secondary structure 






















Query SS confidence 



























































Query Sequence  SVIAKQMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQC
Query Conservation        
  
  
 
 



 
 
 
 
 
 
  
    
  









 




  
Alig confidence 













































.












Template Conservation        
  
  
 
 



 
 
 
 
 
 
  
    
  



.




 


    
Template Sequence  ELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTG. KLPVPWPTLVTTL
Template Known Secondary structure  GGGSS
TTGGGTSSS.S
SS
GGGGTTT
Template Predicted Secondary structure 













.




Template SS confidence 



























































   6...10.........20.........30.........40.........50. ........60....
 
   62.......70...... ...80.........90.........100.........110.........
Predicted Secondary structure 












..









Query SS confidence 














. .










































Query Sequence  QYGSIPFTKYPEDIP. . DYVKQSFPEGYTWERIMNFEDGAVCTVSNDSSIQGNCFIYHVK
Query Conservation   

   
 


  
 ..



 






 


  





 
     

    
     
Alig confidence 
...










..










































Template Conservation   ...
 
 


  
   



   
 


 


  





 
      

   
     
Template Sequence  V. . . QCFSRYPDHMKRHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIE
Template Known Secondary structure 
...GGG
B

GGGGGG
TTTT
TTS
TT
Template Predicted Secondary structure  ...


















Template SS confidence 



























































   68 .70.........80.........90.........100.........110.........120....
 
   120.........130.........140....... ..150.........160.........170...
Predicted Secondary structure 


















....





..
Query SS confidence 



























. . . .

























. .
Query Sequence  FSGLNFPPNGPVMQKKTQGWEPNTERLF. . . . ARDGMLLGNNFMALKLEGGGHYLCEF. .
Query Conservation    
 


 






     


 
   ....
 

 
 
       
 


      ..
Alig confidence 















.










....

























..
Template Conservation    
 


 







.
   
  
         
  
         
 


       
Template Sequence  LKGIDFKEDGNILGHK. LEYNYISHNVYITADKQKNGIKANFKIRHNIEDGSVQLADHYQ
Template Known Secondary structure  S

TTSTTTTT
.B
S




GGGTBTTS
Template Predicted Secondary structure 









.

















Template SS confidence 



























































   125....130.........140 .........150.........160.........170.........180...
 
   174.....180.........190.........200..... ....210.....
Predicted Secondary structure 













.
Query SS confidence 































.









Query Sequence  KTTYKAKKPVKMPGYHYVDRKLDVTNHNKDYT. SVEQCEISIA
Query Conservation   


   


  
  


  
        
  . 
   
 
 
Alig confidence 































.









Template Conservation           
 

  


 
 
    
     
     
   
Template Sequence  QNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTA
Template Known Secondary structure  SSSS





S

TT

SS
Template Predicted Secondary structure 

















Template SS confidence 










































   184.....190.........200.........210.........220......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D