Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateTue Oct 3 16:16:01 BST 2017
Rank30Aligned Residues209
% Identity24%Templatec4he4A_
PDB info PDB header:fluorescent proteinChain: A: PDB Molecule:yellow fluorescent protein; PDBTitle: crystal structure of the yellow fluorescent protein phiyfp (phialidium2 sp.)
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
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Query Sequence  SVIAKQMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQC
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Template Sequence  LLFHGKIPYVVEMEGNVDGHTFSIRGKGYGDASVGKVDAQFICTTG. DVPVPWSTLVT. .
Template Known Secondary structure  GGGSS
TTTTTTSSS.

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   6...10.........20.........30.........40.........50. ........60..
 
   62.......70.........80.........90.........100.........110.........120.
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Query Sequence  QYGSIPFTKYPEDIPDYVKQSFPEGYTWERIMNFEDGAVCTVSNDSSIQGNCFIYHVKFS
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Template Sequence  . TLAQCFAKYGPELKDFYKSCMPDGYVQERTITFEGDGNFKTRAEVTFENGSVYNRVKLN
Template Known Secondary structure  .T

GGGSB

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   63......70.........80.........90.........100.........110.........120.
 
   122.......130.........140....... ..150.........160..... ....170.....
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Query Sequence  GLNFPPNGPVMQKKTQGWEPNTERLF. . . . ARDGMLLGNNFMALKLEG. . GGHYLCEFKT
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Template Sequence  GQGFKKDGHVLGKN. LEFNFTPHCLYIWGDQANHGLKSAFKICHEITGSKGDFIVADHTQ
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TTSTTTTT
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   125....130........ .140.........150.........160.........170.........180...
 
   176...180.........190.........200...... ...210.....
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Query Sequence  . . TYKAKKPVKMPGYHYVDRKLDVTNHNKDYTS. VEQCEISIA
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Template Sequence  MNTPIGGGPVHVPEYHHMSYHVKLSKDVTDHRDNMSLKETVRA
Template Known Secondary structure  SS
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   184.....190.........200.........210.........220......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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