Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateTue Oct 3 16:16:01 BST 2017
Rank44Aligned Residues209
% Identity25%Templatec4pfeB_
PDB info PDB header:fluorescent proteinChain: B: PDB Molecule:green fluorescent protein; PDBTitle: crystal structure of vsfgfp-0
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60......
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Query Sequence  QMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQCQYGSI
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Template Sequence  VVPILVELDGDVNGHKFSVRGEGEGDATNGKLTLKFICTTG. KLPVPWPTLVTTLVQC. .
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TTTTTTTTS.S
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GGGGTTT

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   11........20.........30.........40.........50. ........60.......
 
   67..70...... ...80.........90.........100.........110.........120....
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Query Sequence  PFTKYPEDIP. . DYVKQSFPEGYTWERIMNFEDGAVCTVSNDSSIQGNCFIYHVKFSGLN
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Template Sequence  . FSRYPDHMKRHDFFKSAMPEGYVQERTISFKDDGTYKTRAEVKFEGDTLVNRIELKGID
Template Known Secondary structure  .GSB

GGGGGG

TGGGTTT
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   71........80.........90.........100.........110.........120.........
 
   125....130....... ..140....... ..150.........160.........170... .....
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Query Sequence  FPPNGPVMQKKTQ. GWEPNTERLF. . . ARDGMLLGNNFMALKLEGGGHYLCEF. . KTTYK
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Template Sequence  FKEDGNILGHKLEYNFNSHNVYITADKQKNG. IKANFKIRHNVEDGSVQLADHYQQNTPI
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TTSTTTTT
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TTTT.BTTS
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   130.........140.........150.........160 .........170.........180........
 
   179180.........190.. .......200.........210.........220
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Query Sequence  AKKPVKMPGYHYVD. . . RKLDVTNHNKDYTSVEQCEISIARKPVV
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Template Sequence  GDGPVLLPDNHYLSTQSVLSKDPNEKRDHMVLLEFVTAAGIAQVQ
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   189190.........200.........210.........220.........230...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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