Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateTue Oct 3 16:16:01 BST 2017
Rank28Aligned Residues209
% Identity25%Templated1kp5a_
SCOP infoGFP-like GFP-like Fluorescent proteins
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
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Query Sequence  SVIAKQMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQC
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Template Sequence  ELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTG. KLPVPWPTLVT. .
Template Known Secondary structure  GGGSS
TTTTTTTTS.S
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   16...20.........30.........40.........50.........60. ........70..
 
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Query Sequence  QYGSIPFTKYPEDIP. . DYVKQSFPEGYTWERIMNFEDGAVCTVSNDSSIQGNCFIYHVK
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Template Sequence  . TFVQCFSRYPDHMKRHDFFKSAMPEGYVQERTISFKDDGNYKTRAEVKFEGDTLVNRIE
Template Known Secondary structure  .T

GGGSB

GGGGGG
TTTT
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   73......80.........90.........100.........110.........120.........130.
 
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Query Sequence  FSGLNFPPNGPVMQKKTQGWEPNTERLF. . . . ARDGMLLGNNFMALKLEGGGHYLCEF. .
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Template Sequence  LKGIDFKEDGNILGHK. LEYNYNSHNVYITADKQKNGIKANFKIRHNIEDGSVQLADHYQ
Template Known Secondary structure  S

TTSSTTTT
.B
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GGGTBTTSS
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   135....140.........150 .........160.........170.........180.........190...
 
   174.....180.........190........ .200.........210.....
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Query Sequence  KTTYKAKKPVKMPGYHYVDRKLDVT. NHNKDYTSVEQCEISIA
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Template Sequence  QNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTA
Template Known Secondary structure  SSSS





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   194.....200.........210.........220.........230......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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