Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateTue Oct 3 16:16:01 BST 2017
Rank26Aligned Residues202
% Identity27%Templatec2g3oB_
PDB info PDB header:luminescent proteinChain: B: PDB Molecule:green fluorescent protein 2; PDBTitle: the 2.1a crystal structure of copgfp
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60......
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Query Sequence  QMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQCQYGSI
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Template Sequence  AMKIECRITGTLNGVEFELVGGGEGTPEQGRMTNKMKSTKGA. LTFSPYLLSHVMFYH. .
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TTTTTTSSSS.
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   3......10.........20.........30.........40.... .....50.........
 
   67..70.........80.........90.........100.........110.........120......
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Query Sequence  PFTKYPEDIPDYVKQSFPEGYTWERIMNFEDGAVCTVSNDSSIQGNCFIYHVKFSGLNFP
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Template Sequence  . FGTYPSGYENPFLHAI. NGYTNTRIEKYEDGGVLHVSFSYRYEAGRVIGDFKVVGTGFP
Template Known Secondary structure  .G
B
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   63......70........ .80.........90.........100.........110.........120
 
   127..130.........140........ .150.........160.........170.........180...
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Query Sequence  PNGPVMQKKTQGWEPNTERLFA. RDGMLLGNNFMALKLEGGGHYLCEFKTTYKAKKPV. .
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Template Sequence  EDSVIFTDKIIRSNATVEHLHPMGDNVLVGSFARTFSLRDGGYYSFVVDSHMHFKSAIHP
Template Known Secondary structure  TT
GGGTT


TTTTTS
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   123......130.........140.........150.........160.........170.........180..
 
   184.....190.........200.........210....
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Query Sequence  . . . KMPGYHYVDRKLDVTNHNKDYTSVEQCEISI
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Template Sequence  SILQNGGPMFAFRRVEELHSNTE. LGIVEYQHAF
Template Known Secondary structure  TTTS
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   183......190.........200..... ....210.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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