Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateTue Oct 3 16:16:01 BST 2017
Rank45Aligned Residues202
% Identity24%Templatec5fguA_
PDB info PDB header:metal binding, dna binding proteinChain: A: PDB Molecule:green fluorescent protein,extracellular streptodornase d; PDBTitle: structure of sda1 nuclease apoprotein as an egfp fixed-arm fusion
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60......
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Query Sequence  QMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQCQYGSI
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Template Sequence  VVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTG. KLPVPWPTLVTTFVQC. .
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TTTTTTTTS.S
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   11........20.........30.........40.........50. ........60.......
 
   67..70...... ...80.........90.........100.........110.........120....
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Query Sequence  PFTKYPEDIP. . DYVKQSFPEGYTWERIMNFEDGAVCTVSNDSSIQGNCFIYHVKFSGLN
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Template Sequence  . FARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGID
Template Known Secondary structure  .G
B

GGGGGG
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   71........80.........90.........100.........110.........120.........
 
   125....130.........140....... ..150.........160.........170........
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Query Sequence  FPPNGPVMQKKTQGWEPNTERLF. . . . . ARDGMLLGNNFMALKLEGGGHYLCEFKTTYK.
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Template Sequence  FKEDGNILGHK. LEYNYNSHNVYIMADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPI
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TTSTTTTT
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GGGTBTTS
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   130.........140 .........150.........160.........170.........180........
 
   179180.........190.. .......200.........210...
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Query Sequence  AKKPVKMPGYHYVD. . . RKLDVTNHNKDYTSVEQCEIS
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Template Sequence  GDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTA
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   189190.........200.........210.........220......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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