Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateTue Oct 3 16:16:01 BST 2017
Rank23Aligned Residues200
% Identity29%Templatec4jeoB_
PDB info PDB header:fluorescent proteinChain: B: PDB Molecule:red fluorescent protein blfp-r5; PDBTitle: crystal structure of red fluorescent protein lanrfpdam exposed to2 prolonged x-ray irradiation
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60........
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Query Sequence  TYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQCQYGSIPF
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Template Sequence  THDLHISGSINGHEFDLEGSGKGNAKEGYQELHLKSNKG. DLSFSPWILVPNIFYQ. . . Y
Template Known Secondary structure  TTTTTTSSS.S
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GGGGTTT

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   6...10.........20.........30.........40.... .....50.........60 .
 
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Query Sequence  TKYPEDIPDYVKQSFPE. . GYTWERIMNFEDGAVCTVSNDSSIQGNCFIYHVKFSGLNFP
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Template Sequence  LPFPDGAMSPYQAAMHDGSGYVMHRSMQFEDGAMLHSDHRYIYKGNHIKGEFRLTGSGFP
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B
GGG
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   65....70.........80.........90.........100.........110.........120....
 
   127..130.........140..... ....150.........160.........170.........180...
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Query Sequence  PNGPVMQKKTQGWEPNTER. LFARDGMLLGNNFMALKLEGGGHYLCEFKTTYKAKKPV. .
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Template Sequence  ADGPVMTNSLTAADWCVDKLLYPNDNTIIGKFDWTYTTTSGKRYQSDVQTNVTFGKPIAA
Template Known Secondary structure  TTSTTTTT


TTTTS

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   125....130.........140.........150.........160.........170.........180....
 
   184.....190.........200.........210.....
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Query Sequence  . . . . KMPGYHYVDRKLDVTNHNKDYTSVEQCEISIA
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Template Sequence  DILKKQPMFVFRKVEL. . . KHTKTELNFKQWQKAFQ
Template Known Secondary structure  TS
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   185....190.........200 .........210.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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