Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateTue Oct 3 16:16:01 BST 2017
Rank40Aligned Residues159
% Identity55%Templatec3rwaE_
PDB info PDB header:fluorescent proteinChain: E: PDB Molecule:fluorescent protein fp480; PDBTitle: crystal structure of circular-permutated mkate
Resolution1.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
Predicted Secondary structure 






















Query SS confidence 



























































Query Sequence  SVIAKQMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQC
Query Conservation        
  
  
 
 



 
 
 
 
 
 
  
    
  









 




  
Alig confidence 



























































Template Conservation        
  
  







 
 
 


 
 
 

    
  
 







 



  
Template Sequence  ELITENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTMRIKVVEGGPLPFAFDILATSF
Template Known Secondary structure  TTS
SSTTTTTTS
S
SS
GGGGGGG
Template Predicted Secondary structure 
























Template SS confidence 



























































   73......80.........90.........100.........110.........120.........130..
 
   62.......70.........80.........90.........100.........110.........120.
Predicted Secondary structure 






















Query SS confidence 



























































Query Sequence  QYGSIPFTKYPEDIPDYVKQSFPEGYTWERIMNFEDGAVCTVSNDSSIQGNCFIYHVKFS
Query Conservation   

   
 


  
 



 






 


  





 
     

    
       
Alig confidence 


...





















































Template Conservation     ...
 


  
 



 










  





 
     



  
       
Template Sequence  SKT. . . FINHTQGIPDFFKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIR
Template Known Secondary structure 
TT...

B
TTT


TTTT
TTS
TT
Template Predicted Secondary structure 


...
















Template SS confidence 



























































   136.. .140.........150.........160.........170.........180.........190..
 
   122.......130.........140.........150.........160...
Predicted Secondary structure 




















Query SS confidence 









































Query Sequence  GLNFPPNGPVMQKKTQGWEPNTERLFARDGMLLGNNFMALKL
Query Conservation 
 


 






     


 
   
 

 
 
       
Alig confidence 









































Template Conservation 
 


 







   



 
 
 
 

 
 
   
 


Template Sequence  GVNFPSNGPVMQKKTLGWEASTEMLYPADGGLEGRSDMALKL
Template Known Secondary structure 


TTSTTTTT


TT
Template Predicted Secondary structure 

















Template SS confidence 









































   193......200.........210.........220.........230....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D