Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateTue Oct 3 16:16:01 BST 2017
Rank39Aligned Residues208
% Identity25%Templatec5j3nA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:green fluorescent protein,hsdr; PDBTitle: c-terminal domain of ecor124i hsdr subunit fused with the ph-sensitive2 gfp variant ratiometric phluorin
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60..
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Query Sequence  VIAKQMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQCQ
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Template Sequence  LFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTG. KLPVPWPTLVTTFV
Template Known Secondary structure  GGSSTTTTTTTTS.S
SS
GGGGTTT

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   13......20.........30.........40.........50....... ..60.........70.
 
   63......70...... ...80.........90.........100.........110.........120
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Query Sequence  YGSIPFTKYPEDIP. . DYVKQSFPEGYTWERIMNFEDGAVCTVSNDSSIQGNCFIYHVKF
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Template Sequence  QC. . . FSRYPDHMKRHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIEL
Template Known Secondary structure  GG...G
B

GGGGGG
TTTT
TTS
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   75. ...80.........90.........100.........110.........120.........130.
 
   121........130.........140....... ..150.........160.........170.. ..
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Query Sequence  SGLNFPPNGPVMQKKTQGWEPNTERLF. . . . ARDGMLLGNNFMALKLEGGGHYLCE. . FK
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Template Sequence  KGIDFKDDGNILGHK. LEYNYNEHLVYIMADKQKNGTKAIFQVHHNIEDGGVQLADHYQQ
Template Known Secondary structure  S

TTSTTTTT
.B
S



TTTTBTTS
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   132.......140...... ...150.........160.........170.........180.........190
 
   175....180.........190........ .200.........210.....
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Query Sequence  TTYKAKKPVKMPGYHYVDRKLDVT. . . NHNKDYTSVEQCEISIA
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Template Sequence  NTPIGDGPVLLPDNHYLHTQSALSKDPNEKRDHMVLLEFVTAAG
Template Known Secondary structure  SS
S





S

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   191........200.........210.........220.........230....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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