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Job DescriptionUndefined
Confidence100.00%DateTue Oct 3 16:16:01 BST 2017
Rank21Aligned Residues212
% Identity25%Templatec3gb3B_
PDB info PDB header:fluorescent proteinChain: B: PDB Molecule:killerred; PDBTitle: x-ray structure of genetically encoded photosensitizer2 killerred in native form
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60
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Query Sequence  MSVIAKQMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQ
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Template Sequence  PALFQSDMTFKIFIDGEVNGQKFTIVADGSSKFPHGDFNVHA. VCETGKLPMSWKPICH.
Template Known Secondary structure  GGGGSS
TT
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SGGGTT.
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   5....10.........20.........30.........40...... ...50.........60..
 
   61........70.........80.........90.........100.........110.........120
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Query Sequence  CQYGSIPFTKYPEDIPDYVKQSFPEGYTWERIMNFEDGAVCTVSNDSSIQGNCFIYHVKF
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Template Sequence  . . LIEPFFARYPDGISHFAQECFPEGLSIDRTVRFENDGTMTSHHTYELDDTCVVSRITV
Template Known Secondary structure  ..T

GGGSB

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Query Sequence  SGLNFPPNGPVMQKKTQGWEPNTERLFAR. DGMLLGNNFMALKLEGGGHYLCEFKT. . TY
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Template Sequence  NCDGFQPDGPIMRDQLVDILPNETHMFPHGPNAVRQLAFIGFTTADGGLMMGHFDSKMTF
Template Known Secondary structure  S

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   124.....130.........140.........150.........160.........170.........180...
 
   178.180.........190.........200..... ....210......
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Query Sequence  KAKKPVKMPGYHYVDRKLDVTNHNKDYT. SVEQCEISIAR
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Template Sequence  NGSRAIEIPGPHFVTIITKQMRDTSDKRDHVCQREVAYAH
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   184.....190.........200.........210.........220...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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