 |
Job Description | Undefined | Confidence | 23.06% | Date | Tue Oct 3 16:16:01 BST 2017 |
Rank | 82 | Aligned Residues | 47 |
% Identity | 17% | Template | c2ldmA_ |
PDB info |
PDB header:transcription/protein binding | Chain: A: PDB Molecule:uncharacterized protein; |
PDBTitle: solution structure of human phf20 tudor2 domain bound to a p53 segment2 containing a dimethyllysine analog p53k370me2
|
Resolution | UNK |
|
  |   |
58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | |
. | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | P | Q | C | Q | Y | G | S | I | P | F | T | K | Y | P | E | D | I | P | D | Y | V | K | Q | S | F | P | E | . |
G | Y | T | W | E | R | I | M | N | F | E | D | G | A | V | C | T | V | S | N | D |
Query Conservation |   |
|
|   |   |   |
|
|   |   |   |
|   |
|
|
|   |   |
|   |
|
|
|
|   |
|
|
|
| . |
|
|
|   |
|
|
|   |   |
|
|
|
|
|
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|
|   |
|   |
|
|
|
|
|
| . | . |   |   |
|   |
|
|
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |   |
|
|
|   |   |
Template Sequence |   |
S | S | E | F | Q | I | N | E | Q | V | L | A | S | W | S | D | S | . |
. |
R | F | Y | P | A | K | V | T | A | V | N | K | D | G | T | Y | T | V | K | F | Y | D | G | V | V | Q | T | V | K | H | I |
Template Known Secondary structure |   |
|
|
|
|
| T | T | S |  |  |  |  |  |
| T | T | S | . | . | S |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  | G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
  |
No model constructed - rank, confidence too low
Phyre is for non-commercial use only
Commercial users please contact Michael Sternberg
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis |
Kelley LA et al. Nature Protocols
10, 845-858 (2015)
[paper]
[Citation
link] |
  |
|
 |
|