Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateTue Oct 3 16:16:01 BST 2017
Rank42Aligned Residues208
% Identity24%Templatec4jrbA_
PDB info PDB header:lipid binding proteinChain: A: PDB Molecule:green fluorescent protein; PDBTitle: structure of cockroach allergen bla g 1 tandem repeat as a egfp fusion
Resolution2.41 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60..
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Query Sequence  VIAKQMTYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQCQ
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Template Sequence  LFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTG. KLPVPWPTLVTTFV
Template Known Secondary structure  GGSS
TTTTTTTTS.S
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GGGGTTT

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   7..10.........20.........30.........40.........50. ........60.....
 
   63......70...... ...80.........90.........100.........110.........120
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Query Sequence  YGSIPFTKYPEDIP. . DYVKQSFPEGYTWERIMNFEDGAVCTVSNDSSIQGNCFIYHVKF
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Template Sequence  QC. . . FARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIEL
Template Known Secondary structure  GG...GSB

GGGGGG
TTTT
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   6970 .........80.........90.........100.........110.........120.....
 
   121........130.........140....... ..150.........160.........170.....
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Query Sequence  SGLNFPPNGPVMQKKTQGWEPNTERLF. . . . . ARDGMLLGNNFMALKLEGGGHYLCEFKT
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Template Sequence  KGIDFKEDGNILGHKL. EYNYNSHNVYIMADKQKNGIKVNFKIRHNIEDGSVQLADHYQQ
Template Known Secondary structure  S

TTSTTTTT
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   126...130.........140. ........150.........160.........170.........180....
 
   176.. .180.........190.. .......200.........210.....
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Query Sequence  TYK. AKKPVKMPGYHYVD. . . RKLDVTNHNKDYTSVEQCEISIA
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Template Sequence  NTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAG
Template Known Secondary structure  SSSS





S

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   185....190.........200.........210.........220........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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