Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateTue Oct 3 16:16:01 BST 2017
Rank29Aligned Residues202
% Identity26%Templatec4dkmH_
PDB info PDB header:fluorescent proteinChain: H: PDB Molecule:amphioxus green fluorescent protein, gfpc1a; PDBTitle: crystal structure of amphioxus gfpc1a
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60........
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Query Sequence  TYKVYMSGTVNGHYFEVEGDGKGKPYEGEQTVKLTVTKGGPLPFAWDILSPQCQYGSIPF
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Template Sequence  THEVHVYGSINGVEFDLVGSGKGNPKDGSEEIQVKSTKG. PLGFSPYIVVPNIFHQ. . . Y
Template Known Secondary structure  TTTTTTSSS.S
SS
GGGTSTT

GG...G
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   6...10.........20.........30.........40.... .....50.........60 .
 
   6970.........80.. .......90.........100.........110.........120.......
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Query Sequence  TKYPEDIPDYVKQS. FPEGYTWERIMNFEDGAVCTVSNDSSIQGNCFIYHVKFSGLNFPP
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Template Sequence  LPFPDGMSPFQAAADDGSGYVVHRTIQFEDGASLTGNYRYSYDGGHIKGEFHVVGSGFPA
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S

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T
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   65....70.........80.........90.........100.........110.........120....
 
   128.130.........140....... ..150.........160.........170.........180...
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Query Sequence  NGPVMQKKTQGWEPNTERLF. ARDGMLLGNNFMALKLEGGGHYLCEFKTTYKAKKPV. . .
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Template Sequence  DGPVMTKSLTAVDWSVATMLFPNDTTVVSTIDWTCPTTSGKRYHATLRTNYTFAKPIAAT
Template Known Secondary structure  TSTTTTT
B




TTBTTS
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   125....130.........140.........150.........160.........170.........180....
 
   184.....190.........200.........210.....
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Query Sequence  . KMPGYHYVDRKLDVTNHNKDYTSVEQCEISIA
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Template Sequence  ILQKQPMFVFRKTEVKASDAE. INLKEWQKAFH
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   185....190.........200..... ....210......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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