Difference between revisions of "Team:UESTC-China/description"

Line 270: Line 270:
 
 
 
<p class="mid">Table 1. Lethal concentration data. These experiments show that TCP is a DNA reactive carcinogen. [4]~[6]</p>
 
<p class="mid">Table 1. Lethal concentration data. These experiments show that TCP is a DNA reactive carcinogen. [4]~[6]</p>
<p class="mid">Lethal concentration data:</p>
+
                      <p class="mid">Human data: It has been reported that objectionable ocular and mucosal irritation were experienced after 15 minutes of exposure to 100 ppm </p>
<table border="" cellspacing="" cellpadding="" class="form-hover">
+
                      <table border="" cellspacing="" cellpadding="" class="form-hover">
<thead>
+
<thead>
 
<tr>
 
<tr>
 
<th>Species</th>
 
<th>Species</th>
Line 349: Line 349:
 
</tbody>
 
</tbody>
 
</table>
 
</table>
<p class="mid">Human data: It has been reported that objectionable ocular and mucosal irritation were experienced after 15 minutes of exposure to 100 ppm </p>
+
<p>One of the most serious pollution incidents was happened at Californians. TCP was spread to all over California because the agricultural divisions of Dow Chemical and Shell started selling two soil fumigants (D-D and Telone) including TCP from the 1940s. Although TCP was banned from use in soil fumigants in the 1990s,there was a large amount of TCP remained and it was frequently detected in drinking water, threating to people's lives seriously[7]. </p>
<p>One of the most serious pollution incidents was happened at Californians. TCP was spread to all over California because the agricultural divisions of Dow Chemical and Shell started selling two soil fumigants (D-D and Telone) including TCP from the 1940s. Although TCP was banned from use in soil fumigants in the 1990s,there was a large amount of TCP remained and it was frequently detected in drinking water, threating to people's lives seriously[7]. </p>
+
 
<p class="pic"><img src="https://static.igem.org/mediawiki/2017/7/7c/T--UESTC-China--description_1.jpg" style="width: 55%;"/></p>
 
<p class="pic"><img src="https://static.igem.org/mediawiki/2017/7/7c/T--UESTC-China--description_1.jpg" style="width: 55%;"/></p>
 
<p class="mid">Figure 1 This map was produced by KQED[7], drawing on information from the State Water Resources Control Board. It shows water systems where significant levels of the 123-TCP have been detected. Image courtesy KQED, whose reporter, Sasha Khokha, recently found her own water supply to be contaminated as part of a story on this issue.</p>
 
<p class="mid">Figure 1 This map was produced by KQED[7], drawing on information from the State Water Resources Control Board. It shows water systems where significant levels of the 123-TCP have been detected. Image courtesy KQED, whose reporter, Sasha Khokha, recently found her own water supply to be contaminated as part of a story on this issue.</p>
Line 370: Line 369:
 
<p>How do people solve TCP? Traditional remediation technology to treat 1,2,3-TCP includes granular activated carbon (GAC), dechlorination by hydrogen release compound (HRC®), reductive dechlorination by zero valent iron(ZVI) and so on[10]~[12]. </p>
 
<p>How do people solve TCP? Traditional remediation technology to treat 1,2,3-TCP includes granular activated carbon (GAC), dechlorination by hydrogen release compound (HRC®), reductive dechlorination by zero valent iron(ZVI) and so on[10]~[12]. </p>
 
 
<p class="pic"><img src="https://static.igem.org/mediawiki/2017/8/85/T--UESTC-China--description_5.png" style="width: 95%;"/></p>
+
<p class="pic"><img src="https://static.igem.org/mediawiki/2017/3/34/T--UESTC-China--description_4.jpg" style="width: 95%;"/></p>
 
<p class="mid">Figure 4. Result of treatability tests with TCP-contaminated groundwater/soil[10].</p>
 
<p class="mid">Figure 4. Result of treatability tests with TCP-contaminated groundwater/soil[10].</p>
 
<p>Most of them are inefficient and impractical. There are just a few methods such as ZVI that has a good efficiency. But all of them are cost and hard to large-scale deal with TCP in nature. In that scenario, the concept of " Microbial remediation " began to be respected by people. Some studies have shown that 1,2,3 trichloropropane may be converted to CO2, H20 and HCl by biocatalytic action under the oxidative co-metabolism of O2 as the electron acceptor, so that people are mainly seeking to degrade in aerobic microorganisms method. Unfortunately, scientists have failed to enrich and screen aerobe which can degrade 1,2,3 - trichloropropane. However, they found several strains could degrade TCP in absolutely anaerobic environment . But this method, anaerobic microorganism degradation , hasn't been spread because of its harsh condition and low conversion efficiency. So there are some studies that want to introduce a series of enzyme genes into microorganisms such as Escherichia coli and Pseudomonas putida to degrade TCP. This method is efficient. But it has some limitations. First, these microoganisms have strict nutrient demand and weak competitiveness. Second, they may cause antibiotic resistance gene. Third, they usually depend on special inductions so that they can work. So, we hope to find a better method that can degrade TCP for a long time without extra resource[3]. In this time,Phytoremediation, a safe and long-lasting remediation strategy,go into our field of vision</p>
 
<p>Most of them are inefficient and impractical. There are just a few methods such as ZVI that has a good efficiency. But all of them are cost and hard to large-scale deal with TCP in nature. In that scenario, the concept of " Microbial remediation " began to be respected by people. Some studies have shown that 1,2,3 trichloropropane may be converted to CO2, H20 and HCl by biocatalytic action under the oxidative co-metabolism of O2 as the electron acceptor, so that people are mainly seeking to degrade in aerobic microorganisms method. Unfortunately, scientists have failed to enrich and screen aerobe which can degrade 1,2,3 - trichloropropane. However, they found several strains could degrade TCP in absolutely anaerobic environment . But this method, anaerobic microorganism degradation , hasn't been spread because of its harsh condition and low conversion efficiency. So there are some studies that want to introduce a series of enzyme genes into microorganisms such as Escherichia coli and Pseudomonas putida to degrade TCP. This method is efficient. But it has some limitations. First, these microoganisms have strict nutrient demand and weak competitiveness. Second, they may cause antibiotic resistance gene. Third, they usually depend on special inductions so that they can work. So, we hope to find a better method that can degrade TCP for a long time without extra resource[3]. In this time,Phytoremediation, a safe and long-lasting remediation strategy,go into our field of vision</p>
Line 381: Line 380:
 
<p>As an emerging "Green remediation" technology, phytoremediation shows its own great potential. Compared with "Bioremediation", its advantages are very obvious. The most amazing one is that plants have a set of photosynthetic autotrophic system which means they can degrade TCP in a long time and just need a little nutrition input, This method is easier and cheaper. Plants can also stabilize soil and absorb CO2 while cleaning the environment.</p>
 
<p>As an emerging "Green remediation" technology, phytoremediation shows its own great potential. Compared with "Bioremediation", its advantages are very obvious. The most amazing one is that plants have a set of photosynthetic autotrophic system which means they can degrade TCP in a long time and just need a little nutrition input, This method is easier and cheaper. Plants can also stabilize soil and absorb CO2 while cleaning the environment.</p>
 
 
<p class="pic"><img src="https://static.igem.org/mediawiki/2017/3/34/T--UESTC-China--description_4.jpg" style="width: ;"/></p>
+
<p class="pic"><img src="https://static.igem.org/mediawiki/2017/f/f6/T--UESTC-China--plrecover.jpg" style="width:80% ;"/></p>
 
<p class="mid">Figure 5.The main models of phytoremediation strategy.</p>
 
<p class="mid">Figure 5.The main models of phytoremediation strategy.</p>
 
 
Line 394: Line 393:
 
<li>Technical Fact Sheet – 1,2,3-Trichloropropane (TCP). 2017.EPA</li>
 
<li>Technical Fact Sheet – 1,2,3-Trichloropropane (TCP). 2017.EPA</li>
 
<li>刘福胜. 1995. 1,2,3-三氯丙烷综合利用. 精细石油化工(2), 14-17.</li>
 
<li>刘福胜. 1995. 1,2,3-三氯丙烷综合利用. 精细石油化工(2), 14-17.</li>
<li>Samin, G., & Janssen, D. B. (2012). Transformation and biodegradation of 1, 2, 3-trichloropropane (TCP). Environmental Science and Pollution Research, 19(8), 3067-3078.</li>
+
<li>Samin, G., &amp; Janssen, D. B. 2012. Transformation and biodegradation of 1, 2, 3-trichloropropane (TCP). Environmental Science and Pollution Research, 19(8), 3067-3078.</li>
+
 
<li>McOmie WA, Barnes TR .1949. Acute and subchronic toxicity of 1,2,3-trichloropropane in mice and rabbits. Fed Proc 8:319. </li>
 
<li>McOmie WA, Barnes TR .1949. Acute and subchronic toxicity of 1,2,3-trichloropropane in mice and rabbits. Fed Proc 8:319. </li>
 
 
Line 403: Line 401:
 
 
 
<li>Sasha Khokha .2017. California Finally Begins Regulating Cancer-Causing Chemical Found in Drinking Water. KQED Science Menu</li>
 
<li>Sasha Khokha .2017. California Finally Begins Regulating Cancer-Causing Chemical Found in Drinking Water. KQED Science Menu</li>
+
<li>钱永. 2016. 1,2,3-三氯丙烷在地下水中的环境行为研究. 中国地质大学(北京)).</li>
<li>钱永. (2016). 1,2,3-三氯丙烷在地下水中的环境行为研究. 中国地质大学(北京)).</li>
+
<li>Kang, J. W. 2014. Removing environmental organic pollutants with bioremediation and phytoremediation. Biotechnology letters, 36(6), 1129-1139</li>
+
<li>Kang, J. W. (2014). Removing environmental organic pollutants with bioremediation and phytoremediation. Biotechnology letters, 36(6), 1129-1139</li>
+
+
 
<li>Tratnyek, P. G., Sarathy, V., & Fortuna, J. H. 2008. Fate and remediation of 1, 2, 3-trichloropropane. In International Conference on Remediation of Chlorinated and Recalcitrant Compounds, 6th, Monterey, CA.</li>
 
<li>Tratnyek, P. G., Sarathy, V., & Fortuna, J. H. 2008. Fate and remediation of 1, 2, 3-trichloropropane. In International Conference on Remediation of Chlorinated and Recalcitrant Compounds, 6th, Monterey, CA.</li>
 
 

Revision as of 02:26, 1 November 2017

Team:UESTC-China/Introduction - 2017.igem.org

Overview

The progress of the chemical industry and agriculture has brought great convenience to our lives. But a large number of chemical pollutants have been discharged through various means, most of them difficult to degrade and accompanied by toxicity, seriously polluting our environment. Among them, Organochlorine compounds is occupy a large part of the proportion. Through collecting questionnaire and soil research in most parts of China, our project is directed against 1,2,3-Trichloropropane - an organic chloride which is a less concerned and insecurity pollution. In this summer, we decided to use synthetic biology methods to achieve plant degradation of 1,2,3-trichloropropane by transferring three enzymes to tobacco to produce glycerol, which is environmentally friendly and recyclable.

Harm of 1,2,3-TCP

1,2,3-Trichloropropane(TCP), an emerging organic pollutant, usually formed as industrial solvents[1] and also is a raw material for the production of 1,1,2,3-Tetrachloropropene and other chemical substances[2]. In agriculture, it has been one of the ingredients of soil fumigants, as well as a harmful byproduct for the production of other pesticides. The global yield of TCP reached about 50,000 tons annually[3] at present. Because it is biodegradation-recalcitrant[3] and will cause groundwater pollution and the damage of soil if it is discharged without treatment.

Table 1. Lethal concentration data. These experiments show that TCP is a DNA reactive carcinogen. [4]~[6]

Human data: It has been reported that objectionable ocular and mucosal irritation were experienced after 15 minutes of exposure to 100 ppm

Species Reference LC50(ppm) LCLo(ppm) Time Adjusted 0.5-hrLC (CF) Derived value
Mouse Izmerov et al. 1982 555 \ 2 hr 888 ppm (1.6) 89 ppm
Mouse McOmie & Barnes 1949 \ 5,000 20 min 4,350 ppm (0.87) 435 ppm
Rat McOmie & Barnes 1949 LC100: 700 \ 4 hr 1,400 ppm (2.0) 140 ppm
Mouse McOmie & Barnes 1949 LC100: 700 \ 4 hr 1,400 ppm (2.0) 140 ppm
Mouse McOmie & Barnes 1949 LC100: 340 \ 4 hr 680 ppm (2.0) 68 ppm
Rat Smyth et al. 1962 LC83: 1,000 \ 4 hr 2,000 ppm (2.0) 200 ppm
Rat UCC 1973 LC83: 5,600 \ 1 hr 7,000 ppm (1.25) 700 ppm

One of the most serious pollution incidents was happened at Californians. TCP was spread to all over California because the agricultural divisions of Dow Chemical and Shell started selling two soil fumigants (D-D and Telone) including TCP from the 1940s. Although TCP was banned from use in soil fumigants in the 1990s,there was a large amount of TCP remained and it was frequently detected in drinking water, threating to people's lives seriously[7].

Figure 1 This map was produced by KQED[7], drawing on information from the State Water Resources Control Board. It shows water systems where significant levels of the 123-TCP have been detected. Image courtesy KQED, whose reporter, Sasha Khokha, recently found her own water supply to be contaminated as part of a story on this issue.

What’s more, Dr. Qian Yong from China University of Geosciences has studied the behavior and relevant mechanism of TCP. At the ruins of a factory which was running from 1976 to 1979, he found TCP in high concentration(3890mg / L) underground in 2016[8].

Figure 2. The distribution of TCP contamination underground at this factory[8].

That tell us TCP can keep in the soil and groundwater for years, showing the great stability of TCP in the groundwater and soil. By the way, some researches show the adhesion of 1,2,3-TCP is very low[8], which means that it can easily spread into people's living area and threaten people's health because of its potential carcinogenicity and the huge damage to the kidney. The best evidence is that TCP has been detected around the world more and more frequently in the past decade.

Figure 3. The important report about TCP contamination[3]. We can learn about that the contamination of TCP are becoming more serious.

To sum up, we know that TCP is a very dangerous contaminant. However, governments don't pay enough attention to 1,2,3-TCP.Most counties even don't include 1,2,3-TCP into the pollutant detection list. Under these circumstances, we hope that we can attract attention of the society and contain the spread of 1,2,3-TCP pollution through this project.

Technology to treat 1,2,3-TCP

How do people solve TCP? Traditional remediation technology to treat 1,2,3-TCP includes granular activated carbon (GAC), dechlorination by hydrogen release compound (HRC®), reductive dechlorination by zero valent iron(ZVI) and so on[10]~[12].

Figure 4. Result of treatability tests with TCP-contaminated groundwater/soil[10].

Most of them are inefficient and impractical. There are just a few methods such as ZVI that has a good efficiency. But all of them are cost and hard to large-scale deal with TCP in nature. In that scenario, the concept of " Microbial remediation " began to be respected by people. Some studies have shown that 1,2,3 trichloropropane may be converted to CO2, H20 and HCl by biocatalytic action under the oxidative co-metabolism of O2 as the electron acceptor, so that people are mainly seeking to degrade in aerobic microorganisms method. Unfortunately, scientists have failed to enrich and screen aerobe which can degrade 1,2,3 - trichloropropane. However, they found several strains could degrade TCP in absolutely anaerobic environment . But this method, anaerobic microorganism degradation , hasn't been spread because of its harsh condition and low conversion efficiency. So there are some studies that want to introduce a series of enzyme genes into microorganisms such as Escherichia coli and Pseudomonas putida to degrade TCP. This method is efficient. But it has some limitations. First, these microoganisms have strict nutrient demand and weak competitiveness. Second, they may cause antibiotic resistance gene. Third, they usually depend on special inductions so that they can work. So, we hope to find a better method that can degrade TCP for a long time without extra resource[3]. In this time,Phytoremediation, a safe and long-lasting remediation strategy,go into our field of vision

Our strategy

As an emerging "Green remediation" technology, phytoremediation shows its own great potential. Compared with "Bioremediation", its advantages are very obvious. The most amazing one is that plants have a set of photosynthetic autotrophic system which means they can degrade TCP in a long time and just need a little nutrition input, This method is easier and cheaper. Plants can also stabilize soil and absorb CO2 while cleaning the environment.

Figure 5.The main models of phytoremediation strategy.

"Phytoremediation"[13] mainly contains four models: Phytoextraction, Phytostabilization, Phytovolatilization and Phytodegradation. Through analyzing physical and chemical properties of 1,2,3-TCP, we know that 1,2,3-TCP is unlikely to become concentrated in plants and aquatic organisms because it has a low estimated bioconcentration factor (BCF) and sticking coefficient. So it is difficult to degrade 1,2,3-TCP with phytoextraction and phytostabilization. Furthermore, it needs a complex system to deal with these plants if we choose phytoextraction and phytostabilization, which requires much time and effort. By the way, phytovolatilization is more unsuitable because 1,2,3-TCP , inhaled by human body, would create more damage in the gas. Thus, we finally identified the strategy of phytodegradation. We introduce the gene of three enzyme-haloalkane dehalogenase(DhaA31), haloalcohol dehalogenase(HheC) and Epichlorohydrin epoxide hydrolase (EchA) into model plant- Nicotiana tabacum and transform 1,2,3-TCP into glycerol

Conference

  1. Technical Fact Sheet – 1,2,3-Trichloropropane (TCP). 2017.EPA
  2. 刘福胜. 1995. 1,2,3-三氯丙烷综合利用. 精细石油化工(2), 14-17.
  3. Samin, G., & Janssen, D. B. 2012. Transformation and biodegradation of 1, 2, 3-trichloropropane (TCP). Environmental Science and Pollution Research, 19(8), 3067-3078.
  4. McOmie WA, Barnes TR .1949. Acute and subchronic toxicity of 1,2,3-trichloropropane in mice and rabbits. Fed Proc 8:319.
  5. UCC .1973. Toxicology studies: 1,2,3-trichloropropane. New York, NY: Union Carbide Corporation.
  6. Smyth HF Jr, Carpenter CP, Weil CS, Pozzani UC, Striegel JA .1962. Range finding toxicity data: list VI. Am Ind Hyg Assoc J 23:95-107.
  7. Sasha Khokha .2017. California Finally Begins Regulating Cancer-Causing Chemical Found in Drinking Water. KQED Science Menu
  8. 钱永. 2016. 1,2,3-三氯丙烷在地下水中的环境行为研究. 中国地质大学(北京)).
  9. Kang, J. W. 2014. Removing environmental organic pollutants with bioremediation and phytoremediation. Biotechnology letters, 36(6), 1129-1139
  10. Tratnyek, P. G., Sarathy, V., & Fortuna, J. H. 2008. Fate and remediation of 1, 2, 3-trichloropropane. In International Conference on Remediation of Chlorinated and Recalcitrant Compounds, 6th, Monterey, CA.
  11. Sarathy, V., Salter, A. J., Nurmi, J. T., O’Brien Johnson, G., Johnson, R. L., & Tratnyek, P. G. (2009). Degradation of 1, 2, 3-trichloropropane (TCP): hydrolysis, elimination, and reduction by iron and zinc. Environmental science & technology, 44(2), 787-793.
  12. Sarathy, V., Salter, A. J., Nurmi, J. T., O’Brien Johnson, G., Johnson, R. L., & Tratnyek, P. G. (2009). Degradation of 1, 2, 3-trichloropropane (TCP): hydrolysis, elimination, and reduction by iron and zinc. Environmental science & technology, 44(2), 787-793.
  13. Cherian, S., & Oliveira, M. M. 2005. Transgenic plants in phytoremediation: recent advances and new possibilities. Environmental science & technology, 39(24), 9377-9390.