Difference between revisions of "Team:TU-Eindhoven/Project/Protocols"

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<h1>General Protocols</h1>
 
<h1>General Protocols</h1>
<h6>General Necessities <span style="display:inline-block; width:100px;"></span>Preparation of antibiotics, growth media, stock solutions and more.<br/>
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<h6>General Necessities
Glycerol Stock <span style="display:inline-block; width:100px;"></span> Preparing the bacteria for long term storage in the -80 °C freezer.<br/>
+
<br/><i>Preparation of antibiotics, growth media, stock solutions and more.</i><br/>
Streaking Glycerol Stock <span style="display:inline-block; width:100px;"></span> After storage in the -80 °C, the bacteria can be prepared for usage by streaking them on agar plates.<br/>
+
Glycerol Stock  
Nanodrop<span style="display:inline-block; width:100px;"></span> Nanodrop is used to determine the concentration of a DNA sample.<br/>
+
<br/><i>Preparing the bacteria for long term storage in the -80 °C freezer.</i><br/>
Agarose Gel Electrophoresis<span style="display:inline-block; width:100px;"></span>Agarose Gel Electrophoresis is used to determine the length of DNA samples.<br/>
+
Streaking Glycerol Stock
SDS-Page<span style="display:inline-block; width:100px;"></span>SDS-Page is used to determine the size of a protein.</h6><br/>
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<br/><i>After storage in the -80 °C, the bacteria can be prepared for usage by streaking them on agar plates.</i><br/>
 +
Nanodrop
 +
<br/><i>Nanodrop is used to determine the concentration of a DNA sample.</i><br/>
 +
Agarose Gel Electrophoresis
 +
<br/><i>Agarose Gel Electrophoresis is used to determine the length of DNA samples.</i><br/>
 +
SDS-Page
 +
<br/><i>SDS-Page is used to determine the size of a protein.</i></h6><br/>
  
 
<h1>Traditional Cloning & BioBricking</h1>     
 
<h1>Traditional Cloning & BioBricking</h1>     

Revision as of 14:13, 1 November 2017

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General Protocols

General Necessities
Preparation of antibiotics, growth media, stock solutions and more.
Glycerol Stock
Preparing the bacteria for long term storage in the -80 °C freezer.
Streaking Glycerol Stock
After storage in the -80 °C, the bacteria can be prepared for usage by streaking them on agar plates.
Nanodrop
Nanodrop is used to determine the concentration of a DNA sample.
Agarose Gel Electrophoresis
Agarose Gel Electrophoresis is used to determine the length of DNA samples.
SDS-Page
SDS-Page is used to determine the size of a protein.

Traditional Cloning & BioBricking

PCR Amplification
PCR Purification
Digestion
Ligation
LIU PCR

Gibson Assembly

Vector Linearization
  • Linearize the vector in which you want to insert the gBlocks
Gibson Assembly

Transformation, Protein Expression & Purification

Transformation into NovaBlue
Plating
Colony Picking and Colony PCR
Sequencing
Miniprep
Small culturing
Protein expression
Protein Purification using a His-tag
Protein Purification using a Strep-tag

Testing

Assay
Fluorescence measurements

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