BioSensor Lab Results
As we were unable to transform the construct, therefore, the results for Salt Sensor testing were obtained from iGEM Pitt as a part of the collaboration
1. The results for the RFP fluorescence measured for three replicated of the blank as well as two constructs at excitation 585nm/emission 607nm.
NFkB (negative control) | 0mM | 50mM | 100mM | 200mM | 400mM | 800mM | 1600mM |
---|---|---|---|---|---|---|---|
1 | 326525 | 322701 | 324569 | 324359 | 329257 | 424215 | 447835 |
2 | 324213 | 321232 | 323679 | 324437 | 326850 | 421070 | 436049 |
3 | 321979 | 321615 | 322685 | 324569 | 327046 | 399897 | 406696 |
Wildtype | 0mM | 50mM | 100mM | 200mM | 400mM | 800mM | 1600mM |
1 | 322379 | 324207 | 326546 | 324794 | 330924 | 341689 | 388728 |
2 | 322539 | 323331 | 326077 | 324704 | 331310 | 367254 | 438918 |
3 | 322369 | 323430 | 326386 | 324750 | 330914 | 353266 | 381339 |
Consensus | 0mM | 50mM | 100mM | 200mM | 400mM | 800mM | 1600mM |
1 | 326742 | 326016 | 325673 | 329309 | 337418 | 377574 | 378246 |
2 | 325087 | 326368 | 326416 | 327722 | 337804 | 367197 | 400206 |
3 | 325689 | 324992 | 325312 | 327109 | 334483 | 364028 | 373127 |
2. Averaging and normalizing the fluorescence readings measured for our blank and two constructs.
0mM | 50mM | 100mM | 200mM | 400mM | 800mM | 1600mM | ||
---|---|---|---|---|---|---|---|---|
Average | NFkB | 324239 | 321849.33 | 323644.33 | 324455 | 327717.7 | 415060.7 | 430193.3 |
Consensus | 325839.33 | 325792 | 325800.33 | 328046.7 | 336568.3 | 369599.7 | 383859.7 | |
Wildtype | 322429 | 323656 | 326336.33 | 324749.3 | 331049.3 | 354069.7 | 402995 | |
NFkB | Consensus | 1600.3333 | 3942.6667 | 2156 | 3591.667 | 8850.667 | -45461 | -46333.7 |
WildType | -1810 | 1806.6667 | 2692 | 294.3333 | 3331.667 | -60991 | -27198.3 |
3. The normalized fluorescence values for the two constructs at different NaCl concentrations.
NaCl Concentration (mM) | Wildtype | Consensus |
---|---|---|
0 | -1810 | 1600.33 |
50 | 1806.67 | 3942.67 |
100 | 2692 | 2156 |
200 | 294.33 | 3591.67 |
400 | 3331.67 | 8850.67 |
800 | -60991 | -45461 |
1600 | -27198.33 | -46333.67 |