Team:iTesla-SoundBio/Notebook

Notebook

Date: 5/28/2017

  • Amplified pcbA1 with normal primers
  • MEA, JA

Date: 6/04/2017

  • Ran gel for future purification on Gibson PCRs conducted last training session, and isolated pcbA1 DNA
  • KZ, MEA, JJW

Date: 6/23/2017

  • Amplified genes pcbA4 and pcbA5 using PCR
  • RAN, JA

Date: 6/26/2017

  • PcbA5 & pcbA4 PCR product Gel Analyzation & Purification, Restriction Digest of pET-29B
  • RAN, JA, MEA, JJW

Date: 6/30/2017

  • Ran analyzation and purification gels on digested pET-29B plasmid
  • RAN, JA, MEA, JJW

Date: 7/01/2017

  • Conducted gel extraction on the pET-29B plasmid and pcbA4 gblock that were caught in previous gel electrophoresis slices
  • JJW, MEA

Date: 7/08/2017

  • Used a nanodrop to measure purity and concentration of DNA in digested pET-29B and pcbA4 samples that underwent gel purification
  • KZ

Date: 7/10/2017

  • pcbA4 pET-29B Gibson Assembly MEA, JA, JJW, KZ

Date: 7/13/2017 Transforming Plasmids into Purchased Competent Cells

  • MEA, JJW, KZ

Date: 7/16/2017

  • Inoculating Transformed Purchased Cells into LB+kan Broth
  • ZM, MEA
  • Transforming pcbA4 Plasmids into Self-Made Competent Cells
  • KZ, MEA

Date: 7/18/2017

  • Inoculating Transformed Self-Made Cells and pET-29B Plasmids
  • JA, MEA, KZ

Date: 7/23/2017

  • Miniprep of Inoculated Cells and Nanodrop Verification
  • MEA, JA, KZ

Date: 7/25/2017

  • Digesting pET-29B Plasmids
  • KZ

Date: 7/30/2017

  • Gel Purifying Digested pET-29B and Inoculating Transformed Cells
  • MEA, KZ

Date: 7/31/2017

  • Gel Extraction of Digested pET-29B and Nanodrop Verification
  • MEA, KZ

Date: 8/1/2017

  • Gibson Assembly pcbA4 gene (insert) into digested pET-29B plasmid (vector)
  • KZ

Date: 8/5/2017

  • Transformation of Gibson Assemblied pcbA4 Plasmids into Self Made Competent Cells
  • MEA

Date: 8/8/2017

  • Creating Carb plates
  • JJW

Date: 8/9/2017

  • PCR to amplify pcbA4 geneblock
  • JJW

Date: 8/11/2017

  • Colony PCR on transformed e.coli cells containing pcbA4
  • KZ

Date: 8/12/2017

  • Gel analysis on our plasmids that have underwent colony PCR
  • KZ, RAN

Date: 8/14/2017

  • Gel electrophoresis on PCRed pcbA4 gblock and colony PCR trial #7 and #8
  • JJW

Date: 8/19/2017

  • Prepping DH5 alpha Cells for Transformation
  • JJW, MEA

Date: 8/20/2017

  • Gibson Assembly and Transformation of Positive Control
  • KZ

Date: 8/30/2017

  • Amplifying Geneblock with PCR and Gel Analyzation of PCR
  • MEA, KZ

Date: 8/31/2017

  • Digesting pET-29B Plasmids and Gel Analysis
  • MEA, KZ

Date: 9/10/2017

  • Amplify all three PCB geneblocks through PCR and purify the PCRed solutions through PCR purification
  • MEA, SA, JJW, KZ

Date: 9/12/2017

  • Pet-29b and Biobrick Backbone Miniprep, Analytical Gel on PCR geneblocks and vectors
  • JA, MEA

Date: 9/15/2017

  • Restriction Digest on PCRed A1, 4, 5 and Miniprepped Vectors/ PCR on A4/5 Promoter and A5 gblock
  • MEA, JJW, MS

Date: 9/20/2017

  • PCR Purify and Gel Analyze pcbA5 and A4/5 Promoter, Gel Purify Digested Tubes
  • MEA, JA, AC, JJW, KZ

Date: 9/27/2017

  • Gel Extracting Biobrick Ingredients and Digesting Promoter and pcbA5
  • MEA, JA, CL, JJW, KZ

Date: 9/29/2017

  • Gel Purify and Gel Extract A4/5 Promoter, pcbA5, and pSB1C3
  • JJW, MEA, SA

Date: 10/4/2017

  • Ligation and Transformation of bb and e Backbones and gblocks
  • JJW, JA, MEA

Date: 10/8/2017

  • Miniprep of Transformed RFP Backbone Colonies
  • JJW, KT, MS

Date: 10/11/2017

  • Restriction Digest on RFP and Running Purification Gel, Preparing Mini Preps for Sequencing
  • MEA, CA, AC, JJW, JA

Date: 10/13/2017

  • Gel Extraction of RFP, PCR Promoter and AmilGFP with primers, Making Antibiotic Plates
  • JJW, MEA

Date: 10/17/2017

  • New PCR on A5 and Promoter Inserts
  • JA

Date: 10/18/2017

  • Ligation and Transformation of Plan A, Digest and Gel Purification of Plan B, Off-the-cuff Digest of Promoter and RFP
  • JJW, JA, CL, MEA

Date: 10/20/2017

  • Miniprepping Successfuly Transformed Colonies
  • JJW, MEA, JA, SA

Date: 10/21/2017

  • Preparing Miniprep Samples for Sequencing
  • JA, JJW