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</div> | </div> | ||
+ | <h1>UST Collab<h1> | ||
+ | <p> | ||
+ | <ul> | ||
+ | <li><p>We wanted to do stochastic modelling that simulates RNA molecules and UST provided python code.</p></li> | ||
+ | <li><p>The professor said ODEs are better to model large amounts of RNA.</p></li> | ||
+ | <li><p>UST provided us the ODE python code.</p></li> | ||
+ | <li><p>The code allowed inputs of initial concentration of molecules, timeframe of the experiment, timestep of calculations, and outputs a graph showing concentrations of different molecules over time.</p></li> | ||
+ | <li><p>We modified the code to simulate the transcription, Switch-Trigger RNA dimer formation and translation process of the toehold switch, which tries to predict RFP concentration over time.</p></li> | ||
+ | <li><p>We tried to compare predictions with experimental results.</p></li> | ||
+ | </ul> | ||
+ | </p> | ||
Revision as of 12:42, 4 September 2017