Difference between revisions of "Team:INSA-UPS France/test"

Line 26: Line 26:
  
 
     <section style="background:none;">
 
     <section style="background:none;">
−
       <img src="" alt="">
+
       <img src="https://static.igem.org/mediawiki/2017/6/66/T--INSA-UPS_France--exp_overview.png" alt="">
 
     </section>
 
     </section>
  
 
     <section>
 
     <section>
−
       <h1> Mimicking Vibrio sp. presence with an engineered E. coli</h1>
+
       <h1> Mimicking <i>Vibrio</i> sp. presence with an engineered <i>E. coli</i></h1>
−
       <p>We engineered here E. coli to mimic for safety reason the presence of Vibrio species.</p>
+
       <p>We engineered here <i>E. coli</i> to mimic for safety reason the presence of <i>Vibrio</i> species.</p>
 +
      <ul>
 +
        <li>Cloning: </li>
 +
        <li>Integration in chassis: </li>
 +
        <li>Validation: </li>
 +
      </ul>
 
     </section>
 
     </section>
  
 
     <section>
 
     <section>
−
       <h1> E. coli producing C8-CAI-1 molecules can be sensed by V. harveyi</h1>
+
       <h1> <i>E. coli</i> producing C8-CAI-1 molecules can be sensed by <i>V. harveyi</i></h1>
−
       <p>In this module, we created synthetic communication between our engineered E. coli and V. harveyi.</p>
+
       <p>In this module, we created synthetic communication between our engineered <i>E. coli</i> and <i>V. harveyi</i>.</p>
 +
      <ul>
 +
        <li>Cloning: </li>
 +
        <li>Integration in chassis: </li>
 +
        <li>Validation: </li>
 +
      </ul>
 
     </section>
 
     </section>
  
 
     <section>
 
     <section>
−
       <h1>Modification of V. harveyi to detect both C8-CAI-1 and CAI-1</h1>
+
       <h1>Modification of <i>V. harveyi</i> to detect both C8-CAI-1 and CAI-1</h1>
−
       <p>Here, we present our first effective modification of V. harveyi and its perspectives for the project.</p>
+
       <p>Here, we present our first effective modification of <i>V. harveyi</i> and its perspectives for the project.</p>
 +
      <ul>
 +
        <li>Cloning: </li>
 +
        <li>Integration in chassis: </li>
 +
        <li>Validation: </li>
 +
      </ul>
 
     </section>
 
     </section>
  
Line 47: Line 62:
 
       <h1>Establishing production of diacetyl to establish communication between prokaryotic and eukaryotic cells</h1>
 
       <h1>Establishing production of diacetyl to establish communication between prokaryotic and eukaryotic cells</h1>
 
       <p>This module is dedicated to the production of diacetyl by bacteria, as a signal relay toward yeast.</p>
 
       <p>This module is dedicated to the production of diacetyl by bacteria, as a signal relay toward yeast.</p>
 +
      <ul>
 +
        <li>Cloning: </li>
 +
        <li>Integration in chassis: </li>
 +
        <li>Validation: </li>
 +
      </ul>
 
     </section>
 
     </section>
  
 
     <section>
 
     <section>
−
       <h1> Diacetyl detection by Pichia pastoris</h1>
+
       <h1> Diacetyl detection by <i>Pichia pastoris</i></h1>
−
       <p>This presents are modification and first assays to engineered P. pastoris for diacetyl detection.</p>
+
       <p>This presents are modification and first assays to engineered <i>P. pastoris</i> for diacetyl detection.</p>
 +
      <ul>
 +
        <li>Cloning: </li>
 +
        <li>Integration in chassis: </li>
 +
        <li>Validation: </li>
 +
      </ul>
 
     </section>
 
     </section>
  
 
     <section>
 
     <section>
−
       <h1> P. pastoris is able to produce functional antimicrobial peptides</h1>
+
       <h1> <i>P. pastoris</i> is able to produce functional antimicrobial peptides</h1>
−
       <p>Finally, this module described the efficiency of a yeast-produced crocodile AMP on V. harveyi.</p>
+
       <p>Finally, this module described the efficiency of a yeast-produced crocodile AMP on <i>V. harveyi</i>.</p>
 +
      <ul>
 +
        <li>Cloning: </li>
 +
        <li>Integration in chassis: </li>
 +
        <li>Validation: </li>
 +
      </ul>
 
     </section>
 
     </section>
  
 
     <section>
 
     <section>
−
       <h1>Co-cultivate P. pastoris and V. harveyi is possible</h1>
+
       <h1>Co-cultivate <i>P. pastoris</i> and <i>V. harveyi</i> is possible</h1>
 
       <p>Toward a realistic solution, we tested here how to co-culture how consortium microoganisms.</p>
 
       <p>Toward a realistic solution, we tested here how to co-culture how consortium microoganisms.</p>
 +
      <ul>
 +
        <li>Validation: </li>
 +
      </ul>
 
     </section>
 
     </section>
  
Line 67: Line 100:
 
       <h1>Membrane permeability assay</h1>
 
       <h1>Membrane permeability assay</h1>
 
       <p>We assessed the capacity of our microorganism-impermeable materials to let AMP go through. </p>
 
       <p>We assessed the capacity of our microorganism-impermeable materials to let AMP go through. </p>
 +
      <ul>
 +
        <li>Validation: </li>
 +
      </ul>
 
     </section>
 
     </section>
  

Revision as of 14:35, 26 October 2017

Croc'n Cholera
iGEM UPS-INSA Toulouse 2017

Experiments Overview

This Realisations section describes all our wet lab work, based on our strategy. We divided this section into the Clonings page and the Results page: the first shows how we integrated the parts of our Design into our chassis, and the second shows the experiments we did to further validate their functionnality. Both are presented for each of our eight modules:

Mimicking Vibrio sp. presence with an engineered E. coli

We engineered here E. coli to mimic for safety reason the presence of Vibrio species.

  • Cloning:
  • Integration in chassis:
  • Validation:

E. coli producing C8-CAI-1 molecules can be sensed by V. harveyi

In this module, we created synthetic communication between our engineered E. coli and V. harveyi.

  • Cloning:
  • Integration in chassis:
  • Validation:

Modification of V. harveyi to detect both C8-CAI-1 and CAI-1

Here, we present our first effective modification of V. harveyi and its perspectives for the project.

  • Cloning:
  • Integration in chassis:
  • Validation:

Establishing production of diacetyl to establish communication between prokaryotic and eukaryotic cells

This module is dedicated to the production of diacetyl by bacteria, as a signal relay toward yeast.

  • Cloning:
  • Integration in chassis:
  • Validation:

Diacetyl detection by Pichia pastoris

This presents are modification and first assays to engineered P. pastoris for diacetyl detection.

  • Cloning:
  • Integration in chassis:
  • Validation:

P. pastoris is able to produce functional antimicrobial peptides

Finally, this module described the efficiency of a yeast-produced crocodile AMP on V. harveyi.

  • Cloning:
  • Integration in chassis:
  • Validation:

Co-cultivate P. pastoris and V. harveyi is possible

Toward a realistic solution, we tested here how to co-culture how consortium microoganisms.

  • Validation:

Membrane permeability assay

We assessed the capacity of our microorganism-impermeable materials to let AMP go through.

  • Validation: