Difference between revisions of "Team:ETH Zurich/Basic Part"

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<h1 class="headline">Basic Parts</h1>
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<h1 class="headline">Parts</h1>
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     <p>A <strong>basic part</strong> is a functional unit of DNA that cannot be subdivided into smaller component parts. <a href="http://parts.igem.org/wiki/index.php/Part:BBa_R0051">BBa_R0051</a> is an example of a basic part, a promoter regulated by lambda cl.</p>
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     <p>Most genetically-encoded functions have not yet been converted to BioBrick parts. Thus, there are <strong>many</strong> opportunities to find new, cool, and important genetically encoded functions, and refine and convert the DNA encoding these functions into BioBrick standard biological parts.</p>
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     <img src="https://static.igem.org/mediawiki/2017/7/7e/T--ETH_Zurich--basicparts.png" alt="FIXME">
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<section class="overview">
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     <h1> Overview </h1>
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    <p>We submitted in total 14 new BioBricks to the iGEM registry! You can find all parts and their design below.</p>
 
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     <h1>Best Basic Part Special Prize</h1>
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     <h1>Basic Parts</h1>
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     <p>Most genetically-encoded functions have not yet been converted to BioBrick parts. Thus, there are *many* opportunities to find new, cool, and important genetically encoded functions, and refine and convert the DNA encoding these functions into BioBrick standard biological parts. To be eligible for this award, this part must adhere to <a href="http://parts.igem.org/DNA_Submission">Registry sample submission guidelines</a> and have been sent to the Registry of Standard Biological Parts. If you have a part you wish to nominate your team for this <a href="https://2017.igem.org/Judging/Awards">special prize</a>, make sure you add your part number to your <a href="https://2017.igem.org/Judging/Judging_Form">judging form</a></p>
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    <p><strong>Please note:</strong> Judges will only look at the first part number you list, so please only enter ONE (1) part number in the judging form for this prize.</p>
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     <table width="100%">
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        <tr>
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            <!--<th>Design</th>-->
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            <th>Part</th>
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            <th>Description</th>
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            <th>BioBrick</th>
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        </tr>
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        <tr>
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            <!--<td>Image</td>-->
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            <td>Bacterioferritin</td>
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            <td>Heme-deletion mutant of bacterial iron storage protein functioning as an MRI contrast agent</td>
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            <td><a href="http://parts.igem.org/Part:BBa_K2500000">BBa_K2500000</a></td>
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        </tr>
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            <!--<td>Image</td>-->
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            <td>Azurin</td>
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            <td>Mature cytotoxic copper protein</td>
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            <td><a href="http://parts.igem.org/Part:BBa_K2500001">BBa_K2500001</a></td>
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        </tr>
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            <!--<td>Image</td>-->
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            <td>p28</td>
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            <td>Effector domain of azurin</td>
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            <td><a href="http://parts.igem.org/Part:BBa_K2500002">BBa_K2500002</a></td>
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        </tr>
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            <!--<td>Image</td>-->
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            <td>PtlpA</td>
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            <td>Temperature-responsive promoter TlpA optimized for slight activation above 37°C and full activation at 45 °C</td>
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            <td><a href="http://parts.igem.org/Part:BBa_K2500003">BBa_K2500003</a></td>
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        </tr>
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            <!--<td>Image</td>-->
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            <td>TlpA</td>
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            <td>Protein reversibly inhibiting the pTlpA promoter at temperatures below 37 °C</td>
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            <td><a href="http://parts.igem.org/Part:BBa_K2500004">BBa_K2500004</a></td>
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        </tr>
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            <td>pTlpA_Protein E</td>
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            <td>Bacterial cell lysing protein E regulated by heat-inducible promoter pTlpA and synthetic RBS </td>
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            <td><a href="http://parts.igem.org/Part:BBa_K2500009">BBa_K2500009</a></td>
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        </tr>
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            <!--<td>Image</td>-->
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            <td>AND gate A</td>
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            <td>Synthetic promoter responsive to LldR and luxR </td>
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            <td><a href="http://parts.igem.org/Part:BBa_K2500010">BBa_K2500010</a></td>
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        </tr>
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            <!--<td>Image</td>-->
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            <td><strong>Best Basic Part:</strong> AND gate B</td>
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            <td>Synthetic promoter responsive to LldR and luxR </td>
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            <td><a href="http://parts.igem.org/Part:BBa_K2500011">BBa_K2500011</a></td>
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        </tr>
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            <!--<td>Image</td>-->
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            <td>AND gate C</td>
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            <td>Synthetic promoter responsive to LldR and luxR </td>
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            <td><a href="http://parts.igem.org/Part:BBa_K2500012">BBa_K2500012</a></td>
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        </tr>
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        <tr>
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            <td>Pconst_RBS_LldP/<br>LldR_Pconst_RBS_LuxR</td>
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            <td>Expression cassette consisting of LuxR and LldP/LldR</td>
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            <td><a href="http://parts.igem.org/Part:BBa_K2500013">BBa_K2500013</a></td>
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        </tr>
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    </table>
 
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    <h1>Inspiration</h1>
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    <p>We have a created a <a href="http://parts.igem.org/Well_Documented_Parts">collection of well documented parts</a> that can help you get started. You can also take a look at how other teams have documented their parts in their wiki:</p>
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    <ul>
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        <li><a href="https://2014.igem.org/Team:MIT/Parts"> 2014 MIT </a></li>
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        <li><a href="https://2014.igem.org/Team:Heidelberg/Parts"> 2014 Heidelberg</a></li>
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        <li><a href="https://2014.igem.org/Team:Tokyo_Tech/Parts">2014 Tokyo Tech</a></li>
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    </ul>
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     <h1>TODO</h1>
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     <h1>Part Table </h1>
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     <p><em>Note:</em> this page should list all the basic parts your team has made during your project. You must add all characterization information for your parts on the Registry. You should not put characterization information on this page. Remember judges will only look at the first part in the list for the Best Basic Part award, so put your best part first!</p>
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     <p>Please include a table of all the parts your team has made during your project on this page. Remember part characterization and measurement data must go on your team part pages on the Registry.</p>
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    <groupparts>iGEM17 ETH_Zurich</groupparts>
 
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Revision as of 08:03, 30 October 2017

Parts

FIXME

Overview

We submitted in total 14 new BioBricks to the iGEM registry! You can find all parts and their design below.

Basic Parts

Part Description BioBrick
Bacterioferritin Heme-deletion mutant of bacterial iron storage protein functioning as an MRI contrast agent BBa_K2500000
Azurin Mature cytotoxic copper protein BBa_K2500001
p28 Effector domain of azurin BBa_K2500002
PtlpA Temperature-responsive promoter TlpA optimized for slight activation above 37°C and full activation at 45 °C BBa_K2500003
TlpA Protein reversibly inhibiting the pTlpA promoter at temperatures below 37 °C BBa_K2500004
pTlpA_Protein E Bacterial cell lysing protein E regulated by heat-inducible promoter pTlpA and synthetic RBS BBa_K2500009
AND gate A Synthetic promoter responsive to LldR and luxR BBa_K2500010
Best Basic Part: AND gate B Synthetic promoter responsive to LldR and luxR BBa_K2500011
AND gate C Synthetic promoter responsive to LldR and luxR BBa_K2500012
Pconst_RBS_LldP/
LldR_Pconst_RBS_LuxR		 Expression cassette consisting of LuxR and LldP/LldR BBa_K2500013