Difference between revisions of "Team:ASIJ TOKYO/Description"

 
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{{Team:ASIJ_TOKYO/css}}
 
{{Team:ASIJ_TOKYO/css}}
<!DOCTYPE HTML>
 
 
<!--
 
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Solid State by HTML5 UP
 
Solid State by HTML5 UP
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-->
 
-->
 
<html>
 
<html>
 
 
<head>
 
<head>
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 +
 +
<style>
 
<style>
 
<style>
 
body {margin:0;}
 
body {margin:0;}
  
 
.navbar {
 
.navbar {
  overflow: hidden;
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+
 
   font-family: Arial;
 
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   position: fixed;
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   z-index:50;
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}
 
}
  
 
.navbar a {
 
.navbar a {
 
   float: left;
 
   float: left;
  display: block;
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   text-decoration: none;
 
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}
 
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.dropdown {
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.navbar a:hover, .dropdown:hover .dropbtn {
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}
 
}
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<div class="navbar">
 
<div class="navbar">
  <a href="#home">Home</a>
+
   <a href="https://2017.igem.org/Team:ASIJ_TOKYO">Home</a>
   <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Team">Team</a>
+
  <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Description">Description</a>
+
  <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Description">Project</a>
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  <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Experiments">Experiments</a>
+
  
 +
  <div class="dropdown">
 +
  <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Team">Team</a>
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    <div class="dropdown-content">
 +
      <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Team">Team</a>
 +
      <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Collaborations">Collaborations</a>
 +
      <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Attributions">Attributions</a>
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    </div>
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  </div>
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 +
  <div class="dropdown">
 +
      <a href="#">Project</a>
 +
    <div class="dropdown-content">
 +
      <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Description">Description</a>
 +
      <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Design">Design</a>
 +
      <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Experiments">Experiments</a>
 +
      <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Notebook">Notebook</a>
 +
      <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Results">Results</a>
 +
    </div>
 +
  </div>
 
   <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Parts">Parts</a>
 
   <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Parts">Parts</a>
 
   <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Safety">Safety</a>
 
   <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Safety">Safety</a>
   <a href="https://2017.igem.org/Team:ASIJ_TOKYO/HP/Silver">Human Practices</a>
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   <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Engagement">Human Practices</a>
  <a href="https://2017.igem.org/Team:ASIJ_TOKYO/Notebook">Notebook</a>
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</div>
 
</div>
  
  
<!-- Two -->
 
  
<section id="two" class="wrapper alt spotlight style2">
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<!-- Three -->
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<section id="three" class="wrapper spotlight style2">
 
<div class="inner">
 
<div class="inner">
<a href="#" class="image"><img src="images/pic02.jpg" alt="" /></a>
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<a href="#" class="image"><img src="https://static.igem.org/mediawiki/2017/3/31/Anchiegg.png" alt="" /></a>
 
<div class="content">
 
<div class="content">
<h2 class="major">Tempus adipiscing</h2>
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<h2 class="major"style="color:#ffffff;">Description</h2>
<p>Lorem ipsum dolor sit amet, etiam lorem adipiscing elit. Cras turpis ante, nullam sit amet turpis non, sollicitudin posuere urna. Mauris id tellus arcu. Nunc vehicula id nulla dignissim dapibus. Nullam ultrices, neque et faucibus viverra, ex nulla cursus.</p>
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<a href="#" class="special">Learn more</a>
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</div>
 
</div>
 
</div>
 
</div>
 
</section>
 
</section>
  
<!-- Three -->
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<!-- Three -->
<section id="three" class="wrapper spotlight style3">
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<section id="four" class="wrapper spotlight style1">
 
<div class="inner">
 
<div class="inner">
<a href="#" class="image"><img src="images/pic03.jpg" alt="" /></a>
 
 
<div class="content">
 
<div class="content">
<h2 class="major">Nullam dignissim</h2>
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<h2 class="major">Construct Model</h2>
<p>Lorem ipsum dolor sit amet, etiam lorem adipiscing elit. Cras turpis ante, nullam sit amet turpis non, sollicitudin posuere urna. Mauris id tellus arcu. Nunc vehicula id nulla dignissim dapibus. Nullam ultrices, neque et faucibus viverra, ex nulla cursus.</p>
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<p>Building off of a rapamycin induced split-luciferase system characterized by the 2015 Peking iGEM team, our construct consists of a promoter reporter system that looks at two downstream products, c-Myc and COX-2 (Peking iGEM Team 2015, 2015). These products are assembled into a construct composed of fusion proteins as well as split luciferase fragments (COX-2 - FRB - nLuc and c-Myc - FKBP - cLuc). In the presence of rapamycin, the interacting protein partners dimerize and subsequently cause luciferase to activate. In order to test this model, we created vectors of our constructs and inserted them into E. coli cells. </p>
<a href="#" class="special">Learn more</a>
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</div>
 
</div>
</div>
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</div>
 
</section>
 
</section>
 +
<!-- Two -->
  
<!-- Four -->
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<!-- Four -->
<section id="four" class="wrapper alt style1">
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<section id="four" class="wrapper alt style1">
 
<div class="inner">
 
<div class="inner">
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<section class="features">
 
<article>
 
<a href="#" class="image"><img src="images/pic04.jpg" alt="" /></a>
 
<h3 class="major">Sed feugiat lorem</h3>
 
<p>Lorem ipsum dolor sit amet, consectetur adipiscing vehicula id nulla dignissim dapibus ultrices.</p>
 
<a href="#" class="special">Learn more</a>
 
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<article>
 
<a href="#" class="image"><img src="images/pic05.jpg" alt="" /></a>
 
<h3 class="major">Nisl placerat</h3>
 
<p>Lorem ipsum dolor sit amet, consectetur adipiscing vehicula id nulla dignissim dapibus ultrices.</p>
 
<a href="#" class="special">Learn more</a>
 
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<article>
 
<a href="#" class="image"><img src="images/pic06.jpg" alt="" /></a>
 
<h3 class="major">Ante fermentum</h3>
 
<p>Lorem ipsum dolor sit amet, consectetur adipiscing vehicula id nulla dignissim dapibus ultrices.</p>
 
<a href="#" class="special">Learn more</a>
 
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<article>
 
<a href="#" class="image"><img src="images/pic07.jpg" alt="" /></a>
 
<h3 class="major">Fusce consequat</h3>
 
<p>Lorem ipsum dolor sit amet, consectetur adipiscing vehicula id nulla dignissim dapibus ultrices.</p>
 
<a href="#" class="special">Learn more</a>
 
</article>
 
</section>
 
 
</div>
 
</section>
 
  
</section>
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<section class="features">
 +
<article>
 +
<a href="#" class="image"><img src="https://static.igem.org/mediawiki/2017/c/cc/Diagram_Models_%283%29-1.jpg" /></a>
 +
<h3 class="major">Figure 1</h3>
 +
<p>Our gene production construct is modeled to produce COX-2 and c-Myc, which we used to simulate conditions in human bodies when these proteins are overproduced, in the case of CRC. The construct consists of an Anderson promoter, a ribosomal binding site, a COX-2 gene/c-Myc gene, and a terminator.</p>
 +
</article>
 +
<article>
 +
<a href="#" class="image"><img src="https://static.igem.org/mediawiki/2017/9/90/P-Rsystemanchiegg.jpg" title="Click to return back to the top." /></a>
 +
<h3 class="major">Figure 2</h3>
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<p>Our promoter-reporter construct is built so that only when there is both COX-2 and c-Myc will the binding sites be able to come together and glow with the addition of rapamycin. The construct built to bind with COX-2 consists of a COX-2 promoter, FRB, n-Luc, and terminator. The construct built to bind with c-Myc consists of a c-Myc promoter, FKBP, c-Luc, and terminator.</p>
 +
</article>
 +
<article>
 +
<a href="#" class="image"><img src="https://static.igem.org/mediawiki/2017/a/a5/P-Rsystemanchiegg2.jpg" title="Click to return back to the top." /></a>
 +
<h3 class="major">Figure 3</h3>
 +
<p>Our promoter-reporter system consists of two separate constructs each with a gene-specific promoter attached to a non-specific binding site fused to a domain of split luciferase. One construct consists of a COX-2 promoter, a FRB domain, and n-Luc, and the other consists of a c-Myc promoter, a FKBP domain, and c-Luc. The split system is built so that only when the presence of both COX-2 and c-Myc is detected will the binding sites be able to come together with the addition of rapamycin and cause glowing.</p>
  
+
</article>
 +
<article>
 +
 +
<a href="#" class="image"><img src="https://static.igem.org/mediawiki/2017/e/ec/Insolutionanchiegg.jpg" title="Click to return back to the top." /></a>
 +
<h3 class="major">Figure 4</h3>
 +
<p>In solution, our two gene constructs are able to simulate the conditions in the human body by producing proteins COX-2 and c-Myc. These proteins then interact with the promoter-reporter constructs by connecting to the non- specific binding sites, allowing the dimerization of the FKBP-Rapamycin-FRB complex. This then orients the split- luciferase so they can come together.</p>
 +
</article>
 +
</section>
 +
</div>
 +
</section>
  
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+
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p

Latest revision as of 15:53, 1 November 2017

Description

Construct Model

Building off of a rapamycin induced split-luciferase system characterized by the 2015 Peking iGEM team, our construct consists of a promoter reporter system that looks at two downstream products, c-Myc and COX-2 (Peking iGEM Team 2015, 2015). These products are assembled into a construct composed of fusion proteins as well as split luciferase fragments (COX-2 - FRB - nLuc and c-Myc - FKBP - cLuc). In the presence of rapamycin, the interacting protein partners dimerize and subsequently cause luciferase to activate. In order to test this model, we created vectors of our constructs and inserted them into E. coli cells.

Figure 1

Our gene production construct is modeled to produce COX-2 and c-Myc, which we used to simulate conditions in human bodies when these proteins are overproduced, in the case of CRC. The construct consists of an Anderson promoter, a ribosomal binding site, a COX-2 gene/c-Myc gene, and a terminator.

Figure 2

Our promoter-reporter construct is built so that only when there is both COX-2 and c-Myc will the binding sites be able to come together and glow with the addition of rapamycin. The construct built to bind with COX-2 consists of a COX-2 promoter, FRB, n-Luc, and terminator. The construct built to bind with c-Myc consists of a c-Myc promoter, FKBP, c-Luc, and terminator.

Figure 3

Our promoter-reporter system consists of two separate constructs each with a gene-specific promoter attached to a non-specific binding site fused to a domain of split luciferase. One construct consists of a COX-2 promoter, a FRB domain, and n-Luc, and the other consists of a c-Myc promoter, a FKBP domain, and c-Luc. The split system is built so that only when the presence of both COX-2 and c-Myc is detected will the binding sites be able to come together with the addition of rapamycin and cause glowing.

Figure 4

In solution, our two gene constructs are able to simulate the conditions in the human body by producing proteins COX-2 and c-Myc. These proteins then interact with the promoter-reporter constructs by connecting to the non- specific binding sites, allowing the dimerization of the FKBP-Rapamycin-FRB complex. This then orients the split- luciferase so they can come together.

p