Difference between revisions of "Team:ETH Zurich/Parts"

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        <h1>TOC</h1>
 
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            <h1>Parts</h1>
 
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        <section>
 
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            <p>Each team will make new parts during iGEM and will submit them to the Registry of Standard Biological Parts. The iGEM software provides an easy way to present the parts your team has created. The <code>&lt;groupparts&gt;</code> tag (see below) will generate a table with all of the parts that your team adds to your team sandbox.</p>
 
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            <p>Remember that the goal of proper part documentation is to describe and define a part, so that it can be used without needing to refer to the primary literature. Registry users in future years should be able to read your documentation and be able to use the part successfully. Also, you should provide proper references to acknowledge previous authors and to provide for users who wish to know more.</p>
 
  
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            <h5>Note</h5>
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            <p>Note that parts must be documented on the <a href="http://parts.igem.org/Main_Page"> Registry</a>. This page serves to <i>showcase</i> the parts you have made. Future teams and other users and are much more likely to find parts by looking in the Registry than by looking at your team wiki.</p>
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<h1 class="headline">Parts</h1>
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            <h5>Adding parts to the registry</h5>
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            <p>You can add parts to the Registry at our <a href="http://parts.igem.org/Add_a_Part_to_the_Registry">Add a Part to the Registry</a> link.</p>
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            <p>We encourage teams to start completing documentation for their parts on the Registry as soon as you have it available. The sooner you put up your parts, the better you will remember all the details about your parts. Remember, you don't need to send us the DNA sample before you create an entry for a part on the Registry. (However, you <b>do</b> need to send us the DNA sample before the Jamboree. If you don't send us a DNA sample of a part, that part will not be eligible for awards and medal criteria.)</p>
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            <h5>What information do I need to start putting my parts on the Registry?</h5>
 
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            <p>The information needed to initially create a part on the Registry is:</p>
 
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            <ul>
 
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                <li>Part Name</li>
 
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                <li>Part type</li>
 
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                <li>Creator</li>
 
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                <li>Sequence</li>
 
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                <li>Short Description (60 characters on what the DNA does)</li>
 
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                <li>Long Description (Longer description of what the DNA does)</li>
 
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                <li>Design considerations</li>
 
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            </ul>
 
  
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            <p>
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<figure class="top-fig-single">
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            We encourage you to put up <em>much more</em> information as you gather it over the summer. If you have images, plots, characterization data and other information, please also put it up on the part page. </p>
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    <img src="https://static.igem.org/mediawiki/2017/7/7e/T--ETH_Zurich--basicparts.png" alt="FIXME">
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</figure>
  
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            <h5>Inspiration</h5>
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<section class="overview">
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            <p>We have a created a <a href="http://parts.igem.org/Well_Documented_Parts">collection of well documented parts</a> that can help you get started. You can also take a look at how other teams have documented their parts in their wiki:</p>
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            <ul>
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                <li><a href="https://2014.igem.org/Team:MIT/Parts"> 2014 MIT </a></li>
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                <li><a href="https://2014.igem.org/Team:Heidelberg/Parts"> 2014 Heidelberg</a></li>
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                <li><a href="https://2014.igem.org/Team:Tokyo_Tech/Parts">2014 Tokyo Tech</a></li>
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            </ul>
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             <h5>Part Table </h5>
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<h1>Overview</h1>
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             <p>Please include a table of all the parts your team has made during your project on this page. Remember part characterization and measurement data must go on your team part pages on the Registry.</p>
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             <groupparts>iGEM17 ETH_Zurich</groupparts>
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    <p>We submitted in total 14 new BioBricks to the iGEM registry! You can find all of them below in our list of parts. Curious to learn more? Visit <a href="https://2017.igem.org/Team:ETH_Zurich/Basic_Part">Basic Parts</a> and <a href="https://2017.igem.org/Team:ETH_Zurich/Composite_Part">Composite Parts</a> for more details.</p>
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         </section>
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    </section>
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     </main>
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<section>
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    <h1>List of Parts</h1>
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    <table width="100%">
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        <tr>
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            <!--<th>Design</th>-->
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             <th>Part</th>
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             <th>Description</th>
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            <th>BioBrick</th>
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        </tr>
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        <tr>
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            <!--<td>Image</td>-->
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            <td>Bacterioferritin</td>
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            <td>Heme-deletion mutant of bacterial iron storage protein functioning as an MRI contrast agent</td>
 +
            <td><a href="http://parts.igem.org/Part:BBa_K2500000">BBa_K2500000</a></td>
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        </tr>
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        <tr>
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            <!--<td>Image</td>-->
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            <td>Azurin</td>
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            <td>Redox protein originating from <span class="bacterium">P. aeruginosa</span> with anti-cancer activity</td>
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            <td><a href="http://parts.igem.org/Part:BBa_K2500001">BBa_K2500001</a></td>
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        </tr>
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        <tr>
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            <!--<td>Image</td>-->
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            <td>p28</td>
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            <td>Effector domain of azurin</td>
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            <td><a href="http://parts.igem.org/Part:BBa_K2500002">BBa_K2500002</a></td>
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        </tr>
 +
        <tr>
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            <!--<td>Image</td>-->
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            <td>P<sub>TlpA</sub></td>
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            <td>Temperature-responsive promoter optimized for slight activation above 37°C and full activation at 45 °C</td>
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            <td><a href="http://parts.igem.org/Part:BBa_K2500003">BBa_K2500003</a></td>
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        </tr>
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        <tr>
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            <!--<td>Image</td>-->
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            <td>TlpA</td>
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            <td>Temperature-dependent transcriptional repressor of p<sub>Tlpa</sub></td>
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             <td><a href="http://parts.igem.org/Part:BBa_K2500004">BBa_K2500004</a></td>
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         </tr>
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      <tr>
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            <!--<td>Image</td>-->
 +
            <td>RBS_TlpA</td>
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            <td>Temperature-dependent transcriptional repressor of p<sub>Tlpa</sub> and synthetic RBS</td>
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            <td><a href="http://parts.igem.org/Part:BBa_K2500005">BBa_K2500005</a></td>
 +
        </tr>
 +
      <tr>
 +
            <!--<td>Image</td>-->
 +
            <td>Protein E</td>
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            <td>Bacteria-lysing protein encoded by phage Phi X 17</td>
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            <td><a href="http://parts.igem.org/Part:BBa_K2500006">BBa_K2500006</a></td>
 +
        </tr>
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<tr>
 +
            <!--<td>Image</td>-->
 +
            <td>RBS<sub>eng</sub>_TlpA</td>
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            <td>Temperature-dependent transcriptional repressor of p<sub>Tlpa</sub> with engineered RBS</td>
 +
            <td><a href="http://parts.igem.org/Part:BBa_K2500007">BBa_K2500007</a></td>
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        </tr>
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<tr>
 +
            <!--<td>Image</td>-->
 +
            <td>P<sub>Const</sub>RBS<sub>eng</sub>_TlpA</td>
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            <td><strong>Best Composite Part:</strong> Constitutively expressed temperature-dependent transcriptional repressor of p<sub>Tlpa</sub> with engineered RBS</td>
 +
            <td><a href="http://parts.igem.org/Part:BBa_K2500008">BBa_K2500008</a></td>
 +
        </tr>
 +
        <tr>
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            <td>RBS<sub>eng</sub>_ProteinE</td>
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            <td>Bacteria-lysing protein encoded by phage Phi X 174 with engineered RBS</td>
 +
            <td><a href="http://parts.igem.org/Part:BBa_K2500009">BBa_K2500009</a></td>
 +
        </tr>
 +
        <tr>
 +
            <!--<td>Image</td>-->
 +
            <td>AND Gate A</td>
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            <td>Synthetic promoter responsive to LldR and luxR </td>
 +
            <td><a href="http://parts.igem.org/Part:BBa_K2500010">BBa_K2500010</a></td>
 +
        </tr>
 +
        <tr>
 +
            <!--<td>Image</td>-->
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            <td>AND Gate B</td>
 +
            <td><strong>Best Basic Part:</strong> Synthetic promoter responsive to LldR and luxR </td>
 +
            <td><a href="http://parts.igem.org/Part:BBa_K2500011">BBa_K2500011</a></td>
 +
        </tr>
 +
        <tr>
 +
            <!--<td>Image</td>-->
 +
            <td>AND Gate C</td>
 +
            <td>Synthetic promoter responsive to LldR and luxR </td>
 +
            <td><a href="http://parts.igem.org/Part:BBa_K2500012">BBa_K2500012</a></td>
 +
        </tr>
 +
      <tr>
 +
            <td>P<sub>Const</sub>_RBS_LldP/<br>LldR_P<sub>Const</sub>_RBS_LuxR</td>
 +
            <td>Expression cassette consisting of LuxR and LldP/LldR</td>
 +
            <td><a href="http://parts.igem.org/Part:BBa_K2500013">BBa_K2500013</a></td>
 +
        </tr>
 +
     </table>
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</section>
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Latest revision as of 21:29, 1 November 2017

Parts

FIXME

Overview

We submitted in total 14 new BioBricks to the iGEM registry! You can find all of them below in our list of parts. Curious to learn more? Visit Basic Parts and Composite Parts for more details.

List of Parts

Part Description BioBrick
Bacterioferritin Heme-deletion mutant of bacterial iron storage protein functioning as an MRI contrast agent BBa_K2500000
Azurin Redox protein originating from P. aeruginosa with anti-cancer activity BBa_K2500001
p28 Effector domain of azurin BBa_K2500002
PTlpA Temperature-responsive promoter optimized for slight activation above 37°C and full activation at 45 °C BBa_K2500003
TlpA Temperature-dependent transcriptional repressor of pTlpa BBa_K2500004
RBS_TlpA Temperature-dependent transcriptional repressor of pTlpa and synthetic RBS BBa_K2500005
Protein E Bacteria-lysing protein encoded by phage Phi X 17 BBa_K2500006
RBSeng_TlpA Temperature-dependent transcriptional repressor of pTlpa with engineered RBS BBa_K2500007
PConstRBSeng_TlpA Best Composite Part: Constitutively expressed temperature-dependent transcriptional repressor of pTlpa with engineered RBS BBa_K2500008
RBSeng_ProteinE Bacteria-lysing protein encoded by phage Phi X 174 with engineered RBS BBa_K2500009
AND Gate A Synthetic promoter responsive to LldR and luxR BBa_K2500010
AND Gate B Best Basic Part: Synthetic promoter responsive to LldR and luxR BBa_K2500011
AND Gate C Synthetic promoter responsive to LldR and luxR BBa_K2500012
PConst_RBS_LldP/
LldR_PConst_RBS_LuxR		 Expression cassette consisting of LuxR and LldP/LldR BBa_K2500013