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<section class="show-products-category-navigation page-borders-thick canvas-style-normal header-subtitle-none banner-alignment-center blog-layout-center project-layout-left-sidebar thumbnails-on-open-page-show-all social-icon-style-round hide-info-footer hide-article-author event-show-past-events event-thumbnails event-thumbnail-size-32-standard event-date-label event-list-show-cats event-list-date event-list-time event-list-address event-icalgcal-links event-excerpts event-item-back-link product-list-titles-under product-list-alignment-center product-item-size-11-square product-gallery-size-11-square product-gallery-auto-crop show-product-price show-product-item-nav product-social-sharing newsletter-style-dark hide-opentable-icons opentable-style-dark small-button-style-solid small-button-shape-square medium-button-style-solid medium-button-shape-square large-button-style-solid large-button-shape-square image-block-poster-text-alignment-center image-block-card-dynamic-font-sizing image-block-card-content-position-center image-block-card-text-alignment-left image-block-overlap-dynamic-font-sizing image-block-overlap-content-position-center image-block-overlap-text-alignment-left image-block-collage-dynamic-font-sizing image-block-collage-content-position-top image-block-collage-text-alignment-left image-block-stack-dynamic-font-sizing image-block-stack-text-alignment-left button-style-outline button-corner-style-square tweak-product-quick-view-button-style-floating tweak-product-quick-view-button-position-bottom tweak-product-quick-view-lightbox-excerpt-display-truncate tweak-product-quick-view-lightbox-show-arrows tweak-product-quick-view-lightbox-show-close-button tweak-product-quick-view-lightbox-controls-weight-light native-currency-code-usd collection-type-page collection-5990133859cc681bb449c9ba collection-layout-default homepage mobile-style-available logo-image"> | <section class="show-products-category-navigation page-borders-thick canvas-style-normal header-subtitle-none banner-alignment-center blog-layout-center project-layout-left-sidebar thumbnails-on-open-page-show-all social-icon-style-round hide-info-footer hide-article-author event-show-past-events event-thumbnails event-thumbnail-size-32-standard event-date-label event-list-show-cats event-list-date event-list-time event-list-address event-icalgcal-links event-excerpts event-item-back-link product-list-titles-under product-list-alignment-center product-item-size-11-square product-gallery-size-11-square product-gallery-auto-crop show-product-price show-product-item-nav product-social-sharing newsletter-style-dark hide-opentable-icons opentable-style-dark small-button-style-solid small-button-shape-square medium-button-style-solid medium-button-shape-square large-button-style-solid large-button-shape-square image-block-poster-text-alignment-center image-block-card-dynamic-font-sizing image-block-card-content-position-center image-block-card-text-alignment-left image-block-overlap-dynamic-font-sizing image-block-overlap-content-position-center image-block-overlap-text-alignment-left image-block-collage-dynamic-font-sizing image-block-collage-content-position-top image-block-collage-text-alignment-left image-block-stack-dynamic-font-sizing image-block-stack-text-alignment-left button-style-outline button-corner-style-square tweak-product-quick-view-button-style-floating tweak-product-quick-view-button-position-bottom tweak-product-quick-view-lightbox-excerpt-display-truncate tweak-product-quick-view-lightbox-show-arrows tweak-product-quick-view-lightbox-show-close-button tweak-product-quick-view-lightbox-controls-weight-light native-currency-code-usd collection-type-page collection-5990133859cc681bb449c9ba collection-layout-default homepage mobile-style-available logo-image"> | ||
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<section id="page" class="clear" role="main" > | <section id="page" class="clear" role="main" > | ||
+ | <div class="sqs-layout sqs-grid-12 columns-12" data-type="page"> | ||
+ | <div class="row sqs-row"> | ||
+ | <div class="col sqs-col-12 span-12"> | ||
+ | <div class="sqs-block html-block sqs-block-html"> | ||
+ | <div class="sqs-block-content"> | ||
+ | <h1 class="text-align-center">Result</h1> | ||
+ | </div> | ||
+ | <div class="sqs-block-content"> | ||
− | + | <div class="row sqs-row" id="yui_3_17_2_1_1509572305608_121"> | |
− | + | <div class="col sqs-col-2 span-2"> | |
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− | + | <div class="col sqs-col-9 span-9" id="yui_3_17_2_1_1509572305608_120"> | |
+ | <div class="sqs-block spacer-block sqs-block-spacer sized vsize-1" data-block-type="21" id="block-4ade93f13ea914e436a9"> | ||
+ | <div class="sqs-block-content"> </div> | ||
+ | </div> | ||
+ | <div class="sqs-block html-block sqs-block-html" data-block-type="2" id="block-77a6b083575b3c254a6d"> | ||
+ | <div class="sqs-block-content"> | ||
+ | <p> <strong>1. Construction of the plasmids</strong> | ||
+ | </p> | ||
+ | <p> | ||
+ | We constructed five plasmids-pEGFP-miR-21-sponge-6s; pEGFP-miR-21-sponge-2s; pHAGE-pre-miR-21; pSB1C3-miR-21-sponge-2s and pSB1C3-miR-21-sponge-6s. The plasmids of pEGFP-miR-21-sponge-6s and pEGFP-miR-21-sponge-2s were used to monitor the expression of miR-21 in cells. We also used pHAGE-pre-miR-21 to manipulate miR-21 expression in cells. And the plasmids of pSB1C3-miR-21-sponge-6s and pSB1C3-miR-21-sponge-2s were submitted to 2017IGEM (part number: BBa_K2514000 and BBa_K2514001). | ||
+ | </p> | ||
+ | <p> <strong>1.1 Construction of pEGFP-miR-21-sponge-6s and pEGFP-miR-21-sponge-2s plasmid</strong> | ||
+ | </p> | ||
+ | <p> | ||
+ | 1.1.1 Amplification of miR-21-sponge-6s and miR-21-sponge-2s fragment. | ||
+ | </p> | ||
+ | <p> | ||
+ | To monitor the expression level of miR-21 in different cells, we made two plasmids of miR-21 sponges in the 3’UTR of GFP. Firstly, we designed miR-21 sponges contains six miR-21 binding sites with 3-nt spacers for bulged sites (pEGFP-miR-21-sponge-6s) and miR-21 sponges contains two miR-21 binding sites with 3-nt spacers for bulged sites (pEGFP-miR-21-sponge-2s) based on the sequence of hsa-miR-21 according to the previous study (Ebert MS, Neilson JR, Sharp PA. MicroRNA sponges: competitive inhibitors of small RNAs in mammalian cells. Nat Methods. 2007 Sep;4(9):721-6). Then we amplified miR-21-sponge-6s and miR-21-sponge-2s using primers. After that, we purified the PCR products by PCR Purification Kit and digested them with restriction enzymes Xho I and Hind III (Fig 1 A and B). | ||
+ | </p> | ||
+ | </div> | ||
+ | </div> | ||
+ | <div class="sqs-block image-block sqs-block-image sqs-text-ready" data-block-type="5" id="block-yui_3_17_2_93_1509069313608_37436"> | ||
+ | <div class="sqs-block-content" id="yui_3_17_2_1_1509572305608_119"> | ||
− | + | <div class="image-block-outer-wrapper layout-caption-below design-layout-inline" id="yui_3_17_2_1_1509572305608_118"> | |
− | + | ||
− | + | <div class="intrinsic" style="max-width:468.0px;" id="yui_3_17_2_1_1509572305608_117"> | |
− | + | ||
− | + | <div style="padding-bottom: 29.0598%; overflow: hidden;" class="image-block-wrapper has-aspect-ratio" data-description="<p> <em>Fig 1. Electrophoresis of miR-21-sponge-6s (A: lanes 1-3) and miR-21-sponge-2s (B: lanes 4-6) PCR product.</em> | |
− | + | </p> | |
− | + | " id="yui_3_17_2_1_1509572305608_116"> | |
− | + | <noscript> | |
− | <div class="sqs-block-content"> </div> | + | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2ad39652deaab95256187/1509076299352/" alt="Fig 1. Electrophoresis of miR-21-sponge-6s (A: lanes 1-3) and miR-21-sponge-2s (B: lanes 4-6) PCR product." /> |
+ | </noscript> | ||
+ | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2ad39652deaab95256187/1509076299352/" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2ad39652deaab95256187/1509076299352/" data-image-dimensions="468x136" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f2ad39652deaab95256187" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="Fig 1. Electrophoresis of miR-21-sponge-6s (A: lanes 1-3) and miR-21-sponge-2s (B: lanes 4-6) PCR product." src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2ad39652deaab95256187/1509076299352/?format=500w" data-image-resolution="500w"></div> | ||
+ | |||
+ | <div class="image-caption-wrapper"> | ||
+ | <div class="image-caption"> | ||
+ | <p> <em>Fig 1. Electrophoresis of miR-21-sponge-6s (A: lanes 1-3) and miR-21-sponge-2s (B: lanes 4-6) PCR product.</em> | ||
+ | </p> | ||
+ | </div> | ||
+ | </div> | ||
+ | |||
+ | </div> | ||
+ | |||
+ | </div> | ||
+ | |||
+ | </div> | ||
+ | </div> | ||
+ | <div class="sqs-block html-block sqs-block-html" data-block-type="2" id="block-yui_3_17_2_93_1509069313608_37715"> | ||
+ | <div class="sqs-block-content"> | ||
+ | <p> | ||
+ | <!--[if gte vml 1]> | ||
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+ | <p>1.1.2 Digested pEGFP-C1 vector</p> | ||
+ | <p> | ||
+ | We know that microRNA can bind the 3 'UTR of genes to regulate the expression, so we choose EGFP to be the detector of miR-21. We digested the pEGFP-C1 vectors with restriction enzymes Xho I and Hind III (Fig 2). | ||
+ | </p> | ||
+ | </div> | ||
+ | </div> | ||
+ | <div class="sqs-block image-block sqs-block-image sqs-text-ready" data-block-type="5" id="block-yui_3_17_2_93_1509069313608_68774"> | ||
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+ | |||
+ | <div style="padding-bottom: 49.7409%; overflow: hidden;" class="image-block-wrapper has-aspect-ratio" data-description="<p> | ||
+ | <em>Fig 2. Electrophoresis of the digested pEGFP-c1 vector.</em> | ||
+ | </p> | ||
+ | " id="yui_3_17_2_1_1509572305608_136"> | ||
+ | <noscript> | ||
+ | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2ad766c3194b973e71691/1509076361545/Fig+2.+Electrophoresis+of+the+digested+pEGFP-c1+vector." alt="Fig 2. Electrophoresis of the digested pEGFP-c1 vector." /> | ||
+ | </noscript> | ||
+ | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2ad766c3194b973e71691/1509076361545/Fig+2.+Electrophoresis+of+the+digested+pEGFP-c1+vector." data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2ad766c3194b973e71691/1509076361545/Fig+2.+Electrophoresis+of+the+digested+pEGFP-c1+vector." data-image-dimensions="193x96" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f2ad766c3194b973e71691" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="Fig 2. Electrophoresis of the digested pEGFP-c1 vector." src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2ad766c3194b973e71691/1509076361545/Fig+2.+Electrophoresis+of+the+digested+pEGFP-c1+vector.?format=300w" data-image-resolution="300w"></div> | ||
+ | |||
+ | <div class="image-caption-wrapper"> | ||
+ | <div class="image-caption"> | ||
+ | <p> | ||
+ | <em>Fig 2. Electrophoresis of the digested pEGFP-c1 vector.</em> | ||
+ | </p> | ||
+ | </div> | ||
+ | </div> | ||
+ | |||
+ | </div> | ||
+ | |||
+ | </div> | ||
+ | |||
+ | </div> | ||
+ | </div> | ||
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+ | <div class="sqs-block-content"> | ||
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+ | <![endif]--> | ||
+ | </p> | ||
+ | <p> | ||
+ | 1.1.3 Ligation of purified miR-21-sponge-6s and miR-21-sponge-2s fragments to pEGFP-c1 vector | ||
+ | </p> | ||
+ | <p> | ||
+ | miR-21-sponge-6s fragments and miR-21-sponge-2s fragments were ligated to pEGFP-c1 vector, respectively. Then we selected the positive clones by PCR and sequencing (Fig 3 and 4) | ||
+ | </p> | ||
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+ | |||
+ | </div> | ||
+ | |||
+ | </div> | ||
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+ | <div style="padding-bottom: 55.9748%; overflow: hidden;" class="image-block-wrapper has-aspect-ratio" data-description="<p>C</p> | ||
+ | <p> | ||
+ | <em> | ||
+ | Fig 3. Electrophoresis of the PCR identifications of pEGFP- miR-21-sponge-6s (A: lane 1-3) and&nbsp; pEGFP- miR-21-sponge-2s (B: lane 4-6) vector and sequencing map. | ||
+ | </em> | ||
+ | </p> | ||
+ | " id="yui_3_17_2_1_1509572305608_170"> | ||
+ | <noscript> | ||
+ | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2ae499140b7ad7ea3604f/1509076642038/" alt="C Fig 3. Electrophoresis of the PCR identifications of pEGFP- miR-21-sponge-6s (A: lane 1-3) and pEGFP- miR-21-sponge-2s (B: lane 4-6) vector and sequencing map." /> | ||
+ | </noscript> | ||
+ | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2ae499140b7ad7ea3604f/1509076642038/" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2ae499140b7ad7ea3604f/1509076642038/" data-image-dimensions="318x178" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f2ae499140b7ad7ea3604f" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="C Fig 3. Electrophoresis of the PCR identifications of pEGFP- miR-21-sponge-6s (A: lane 1-3) and pEGFP- miR-21-sponge-2s (B: lane 4-6) vector and sequencing map." src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2ae499140b7ad7ea3604f/1509076642038/?format=500w" data-image-resolution="500w"></div> | ||
+ | |||
+ | <div class="image-caption-wrapper"> | ||
+ | <div class="image-caption"> | ||
+ | <p>C</p> | ||
+ | <p> | ||
+ | <em> | ||
+ | Fig 3. Electrophoresis of the PCR identifications of pEGFP- miR-21-sponge-6s (A: lane 1-3) and pEGFP- miR-21-sponge-2s (B: lane 4-6) vector and sequencing map. | ||
+ | </em> | ||
+ | </p> | ||
+ | </div> | ||
+ | </div> | ||
+ | |||
+ | </div> | ||
+ | |||
+ | </div> | ||
+ | |||
+ | </div> | ||
+ | </div> | ||
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+ | |||
+ | <div style="padding-bottom: 55.9585%; overflow: hidden;" class="image-block-wrapper has-aspect-ratio" data-description="<p> | ||
+ | <em> | ||
+ | Fig 4. Electrophoresis of pEGFP- miR-21-sponge-6s (lane 1,2) and&nbsp; pEGFP- miR-21-sponge-2s (lane 3,4) vector. | ||
+ | </em> | ||
+ | </p> | ||
+ | " id="yui_3_17_2_1_1509572305608_187"> | ||
+ | <noscript> | ||
+ | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2ae59652deaab95257722/1509076660513/" alt="Fig 4. Electrophoresis of pEGFP- miR-21-sponge-6s (lane 1,2) and pEGFP- miR-21-sponge-2s (lane 3,4) vector." /> | ||
+ | </noscript> | ||
+ | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2ae59652deaab95257722/1509076660513/" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2ae59652deaab95257722/1509076660513/" data-image-dimensions="193x108" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f2ae59652deaab95257722" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="Fig 4. Electrophoresis of pEGFP- miR-21-sponge-6s (lane 1,2) and pEGFP- miR-21-sponge-2s (lane 3,4) vector." src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2ae59652deaab95257722/1509076660513/?format=300w" data-image-resolution="300w"></div> | ||
+ | |||
+ | <div class="image-caption-wrapper"> | ||
+ | <div class="image-caption"> | ||
+ | <p> | ||
+ | <em> | ||
+ | Fig 4. Electrophoresis of pEGFP- miR-21-sponge-6s (lane 1,2) and pEGFP- miR-21-sponge-2s (lane 3,4) vector. | ||
+ | </em> | ||
+ | </p> | ||
+ | </div> | ||
+ | </div> | ||
+ | |||
+ | </div> | ||
+ | |||
+ | </div> | ||
+ | |||
+ | </div> | ||
+ | </div> | ||
+ | <div class="sqs-block html-block sqs-block-html" data-block-type="2" id="block-yui_3_17_2_94_1509069313608_12051"> | ||
+ | <div class="sqs-block-content"> | ||
+ | <p> | ||
+ | <!--[if gte vml 1]> | ||
+ | <v:shape | ||
+ | id="_x0000_i1027" type="#_x0000_t75" style='width:281pt;height:214pt'> | ||
+ | <v:imagedata src="file:////Users/tianyuwang/Library/Group%20Containers/UBF8T346G9.Office/msoclip1/01/clip_image005.png" | ||
+ | o:title=""/> | ||
+ | </v:shape> | ||
+ | <![endif]--> | ||
+ | </p> | ||
+ | <p> | ||
+ | <!--[if gte vml 1]> | ||
+ | <v:shape | ||
+ | id="_x0000_i1028" type="#_x0000_t75" style='width:318pt;height:178pt'> | ||
+ | <v:imagedata src="file:////Users/tianyuwang/Library/Group%20Containers/UBF8T346G9.Office/msoclip1/01/clip_image007.png" | ||
+ | o:title=""/> | ||
+ | </v:shape> | ||
+ | <![endif]--> | ||
+ | </p> | ||
+ | <p> | ||
+ | <strong>1.2 Construction of miR-21-</strong> | ||
+ | <strong>precursor</strong> | ||
+ | <strong>expression plasmid</strong> | ||
+ | </p> | ||
+ | <p> | ||
+ | 1.2.1 Amplification of miR-21- precursor fragment. | ||
+ | </p> | ||
+ | <p> | ||
+ | <strong><!--[if gte vml 1]> | ||
+ | <v:shape | ||
+ | id="_x0000_i1029" type="#_x0000_t75" style='width:193pt;height:108pt'> | ||
+ | <v:imagedata src="file:////Users/tianyuwang/Library/Group%20Containers/UBF8T346G9.Office/msoclip1/01/clip_image009.png" | ||
+ | o:title=""/> | ||
+ | </v:shape> | ||
+ | <![endif]--></strong> | ||
+ | To set up a model to determent the amount of miR-21 in cells, we made a construct to express miR-21. We designed the specific primers of human miR-21-precursor based on the sequences of miR-21 precursor ( | ||
+ | <a href="http://www.mirbase.org/cgi-bin/mirna_entry.pl?acc=MI0000077">http://www.miRbase.org/cgi-bin/miRna_entry.pl?acc=MI0000077</a> | ||
+ | ) and amplified 72bp fragment by PCR. After that, we digested the purified PCR products with restriction enzymes Sal I and Not I (Fig 5). | ||
+ | </p> | ||
+ | </div> | ||
+ | </div> | ||
+ | <div class="sqs-block image-block sqs-block-image sqs-text-ready" data-block-type="5" id="block-yui_3_17_2_94_1509069313608_88253"> | ||
+ | <div class="sqs-block-content" id="yui_3_17_2_1_1509572305608_207"> | ||
+ | |||
+ | <div class="image-block-outer-wrapper layout-caption-below design-layout-inline" id="yui_3_17_2_1_1509572305608_206"> | ||
+ | |||
+ | <div class="intrinsic" style="max-width:198.0px;" id="yui_3_17_2_1_1509572305608_205"> | ||
+ | |||
+ | <div style="padding-bottom: 54.0404%; overflow: hidden;" class="image-block-wrapper has-aspect-ratio" data-description="<p> | ||
+ | <em>Fig 5. Electrophoresis of miR-21-</em> | ||
+ | precursor | ||
+ | <em>PCR product. The lanes 1-3 showed the miR-21-</em> | ||
+ | precursor | ||
+ | <em>bands.</em> | ||
+ | </p> | ||
+ | " id="yui_3_17_2_1_1509572305608_204"> | ||
+ | <noscript> | ||
+ | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2af200d9297adf936234e/1509076769342/6.jpg" alt="Fig 5. Electrophoresis of miR-21-precursor PCR product. The lanes 1-3 showed the miR-21-precursor bands." /> | ||
+ | </noscript> | ||
+ | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2af200d9297adf936234e/1509076769342/6.jpg" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2af200d9297adf936234e/1509076769342/6.jpg" data-image-dimensions="198x107" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f2af200d9297adf936234e" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="Fig 5. Electrophoresis of miR-21-precursor PCR product. The lanes 1-3 showed the miR-21-precursor bands." src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2af200d9297adf936234e/1509076769342/6.jpg?format=300w" data-image-resolution="300w"></div> | ||
+ | |||
+ | <div class="image-caption-wrapper"> | ||
+ | <div class="image-caption"> | ||
+ | <p> | ||
+ | <em>Fig 5. Electrophoresis of miR-21-</em> | ||
+ | precursor | ||
+ | <em>PCR product. The lanes 1-3 showed the miR-21-</em> | ||
+ | precursor | ||
+ | <em>bands.</em> | ||
+ | </p> | ||
+ | </div> | ||
+ | </div> | ||
+ | |||
+ | </div> | ||
+ | |||
+ | </div> | ||
+ | |||
+ | </div> | ||
</div> | </div> | ||
− | <div class="sqs-block html-block sqs-block-html" data-block-type="2" id="block- | + | <div class="sqs-block html-block sqs-block-html" data-block-type="2" id="block-yui_3_17_2_94_1509069313608_88531"> |
<div class="sqs-block-content"> | <div class="sqs-block-content"> | ||
− | |||
− | |||
<p> | <p> | ||
− | + | <strong> | |
− | + | <!--[if gte vml 1]> | |
− | + | <v:shape | |
− | + | id="_x0000_i1030" type="#_x0000_t75" style='width:198pt;height:107pt'> | |
− | + | <v:imagedata src="file:////Users/tianyuwang/Library/Group%20Containers/UBF8T346G9.Office/msoclip1/01/clip_image011.png" | |
− | 1. | + | o:title=""/> |
+ | </v:shape> | ||
+ | <![endif]--> | ||
+ | </strong> | ||
+ | 1.2.2 Digested pHAGE-puro vector | ||
</p> | </p> | ||
<p> | <p> | ||
− | + | For | |
+ | <a href="file:///D:/Users/Administrator/AppData/Local/Youdao/Dict/7.5.0.0/resultui/dict/?keyword=eukaryotic">eukaryotic</a> | ||
+ | <a href="file:///D:/Users/Administrator/AppData/Local/Youdao/Dict/7.5.0.0/resultui/dict/?keyword=expression">expression</a> | ||
+ | of has-miR-21 in cells, we digested the | ||
+ | <a href="file:///D:/Users/Administrator/AppData/Local/Youdao/Dict/7.5.0.0/resultui/dict/?keyword=eukaryotic">eukaryotic</a> | ||
+ | <a href="file:///D:/Users/Administrator/AppData/Local/Youdao/Dict/7.5.0.0/resultui/dict/?keyword=expression">expression</a> | ||
+ | vector pHAGE-puro with the same restriction enzymes Sal I and Not I (Fig 6). | ||
</p> | </p> | ||
</div> | </div> | ||
</div> | </div> | ||
− | <div class="sqs-block image-block sqs-block-image sqs-text-ready" data-block-type="5" id="block- | + | <div class="sqs-block image-block sqs-block-image sqs-text-ready" data-block-type="5" id="block-yui_3_17_2_94_1509069313608_105946"> |
− | <div class="sqs-block-content" id=" | + | <div class="sqs-block-content" id="yui_3_17_2_1_1509572305608_224"> |
− | <div class="image-block-outer-wrapper layout-caption-below design-layout-inline" id=" | + | <div class="image-block-outer-wrapper layout-caption-below design-layout-inline" id="yui_3_17_2_1_1509572305608_223"> |
− | <div class="intrinsic" style="max-width: | + | <div class="intrinsic" style="max-width:198.0px;" id="yui_3_17_2_1_1509572305608_222"> |
− | <div style="padding-bottom: | + | <div style="padding-bottom: 54.5455%; overflow: hidden;" class="image-block-wrapper has-aspect-ratio" data-description="<p> |
+ | <em>Fig 6. Electrophoresis of the digested pHAGE-puro vector.\</em> | ||
</p> | </p> | ||
− | " id=" | + | " id="yui_3_17_2_1_1509572305608_221"> |
<noscript> | <noscript> | ||
− | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/ | + | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2af4f27ef2db556c92092/1509076855426/7.jpg" alt="Fig 6. Electrophoresis of the digested pHAGE-puro vector.\" /> |
</noscript> | </noscript> | ||
− | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/ | + | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2af4f27ef2db556c92092/1509076855426/7.jpg" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2af4f27ef2db556c92092/1509076855426/7.jpg" data-image-dimensions="198x108" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f2af4f27ef2db556c92092" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="Fig 6. Electrophoresis of the digested pHAGE-puro vector.\" src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2af4f27ef2db556c92092/1509076855426/7.jpg?format=300w" data-image-resolution="300w"></div> |
<div class="image-caption-wrapper"> | <div class="image-caption-wrapper"> | ||
<div class="image-caption"> | <div class="image-caption"> | ||
− | <p> <em>Fig | + | <p> |
+ | <em>Fig 6. Electrophoresis of the digested pHAGE-puro vector.\</em> | ||
</p> | </p> | ||
</div> | </div> | ||
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− | + | id="_x0000_i1031" type="#_x0000_t75" style='width:198pt;height:107pt'> | |
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o:title=""/> | o:title=""/> | ||
</v:shape> | </v:shape> | ||
<![endif]--> | <![endif]--> | ||
</p> | </p> | ||
− | |||
<p> | <p> | ||
− | + | 1.2.3 Ligation of purified miR-21-precursor fragment to pHAGE-puro vector | |
+ | </p> | ||
+ | <p> | ||
+ | To sequence the miR-21-precursor cloning we got, the purified miR-21-precursor fragment was ligated to pHAGE-puro vector. Then we selected the positive clones by PCR and sequencing (Fig 7 and 8). | ||
</p> | </p> | ||
</div> | </div> | ||
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− | <div class="sqs-block image-block sqs-block-image sqs-text-ready" data-block-type="5" id="block- | + | <div class="sqs-block image-block sqs-block-image sqs-text-ready" data-block-type="5" id="block-yui_3_17_2_94_1509069313608_121180"> |
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− | <div class="image-block-outer-wrapper layout-caption-below design-layout-inline" id=" | + | <div class="image-block-outer-wrapper layout-caption-below design-layout-inline" id="yui_3_17_2_1_1509572305608_240"> |
− | <div class="intrinsic" style="max-width: | + | <div class="intrinsic" style="max-width:192.0px;" id="yui_3_17_2_1_1509572305608_239"> |
− | <div style="padding-bottom: | + | <div style="padding-bottom: 55.7292%; overflow: hidden;" class="image-block-wrapper has-aspect-ratio" data-description="<p>A</p> |
− | + | " id="yui_3_17_2_1_1509572305608_238"> | |
− | + | ||
− | " id=" | + | |
<noscript> | <noscript> | ||
− | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/ | + | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2aff29140b7ad7ea383e0/1509076986534/8.jpg" alt="A" /> |
</noscript> | </noscript> | ||
− | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/ | + | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2aff29140b7ad7ea383e0/1509076986534/8.jpg" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2aff29140b7ad7ea383e0/1509076986534/8.jpg" data-image-dimensions="192x107" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f2aff29140b7ad7ea383e0" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="A" src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2aff29140b7ad7ea383e0/1509076986534/8.jpg?format=300w" data-image-resolution="300w"></div> |
<div class="image-caption-wrapper"> | <div class="image-caption-wrapper"> | ||
<div class="image-caption"> | <div class="image-caption"> | ||
− | <p> | + | <p>A</p> |
− | + | ||
− | + | ||
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− | <div class="sqs-block-content" id=" | + | |
− | <div class="image-block-outer-wrapper layout-caption-below design-layout-inline" id=" | + | <div class="image-block-outer-wrapper layout-caption-below design-layout-inline" id="yui_3_17_2_1_1509572305608_257"> |
− | <div class="intrinsic" style="max-width: | + | <div class="intrinsic" style="max-width:340.0px;" id="yui_3_17_2_1_1509572305608_256"> |
− | <div style="padding-bottom: | + | <div style="padding-bottom: 20.8824%; overflow: hidden;" class="image-block-wrapper has-aspect-ratio" data-description="<p>B</p> |
<p> | <p> | ||
<em> | <em> | ||
− | Fig | + | Fig 7. Electrophoresis of the PCR identified production of pHAGE- pre-miR-21 vector (A) and sequencing map (B) . |
</em> | </em> | ||
</p> | </p> | ||
− | " id=" | + | <p> </p> |
+ | " id="yui_3_17_2_1_1509572305608_255"> | ||
<noscript> | <noscript> | ||
− | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/ | + | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2b02ae31d19b2c6be28b0/1509077035734/" alt="B Fig 7. Electrophoresis of the PCR identified production of pHAGE- pre-miR-21 vector (A) and sequencing map (B) . " /> |
</noscript> | </noscript> | ||
− | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/ | + | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2b02ae31d19b2c6be28b0/1509077035734/" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2b02ae31d19b2c6be28b0/1509077035734/" data-image-dimensions="340x71" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f2b02ae31d19b2c6be28b0" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="B Fig 7. Electrophoresis of the PCR identified production of pHAGE- pre-miR-21 vector (A) and sequencing map (B) . " src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2b02ae31d19b2c6be28b0/1509077035734/?format=500w" data-image-resolution="500w"></div> |
<div class="image-caption-wrapper"> | <div class="image-caption-wrapper"> | ||
<div class="image-caption"> | <div class="image-caption"> | ||
− | <p> | + | <p>B</p> |
<p> | <p> | ||
<em> | <em> | ||
− | Fig | + | Fig 7. Electrophoresis of the PCR identified production of pHAGE- pre-miR-21 vector (A) and sequencing map (B) . |
</em> | </em> | ||
</p> | </p> | ||
+ | <p> </p> | ||
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− | <div class="sqs-block-content" id=" | + | <div class="sqs-block-content" id="yui_3_17_2_1_1509572305608_275"> |
− | <div class="image-block-outer-wrapper layout-caption-below design-layout-inline" id=" | + | <div class="image-block-outer-wrapper layout-caption-below design-layout-inline" id="yui_3_17_2_1_1509572305608_274"> |
− | <div class="intrinsic" style="max-width: | + | <div class="intrinsic" style="max-width:182.0px;" id="yui_3_17_2_1_1509572305608_273"> |
− | <div style="padding-bottom: | + | <div style="padding-bottom: 54.3956%; overflow: hidden;" class="image-block-wrapper has-aspect-ratio" data-description="<p> |
− | <em> | + | <em>Fig 8. Electrophoresis of pHAGE-pre-miR-21 vector.</em> |
− | + | ||
− | + | ||
</p> | </p> | ||
− | " id=" | + | " id="yui_3_17_2_1_1509572305608_272"> |
<noscript> | <noscript> | ||
− | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/ | + | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2b0809140b7ad7ea3904a/1509077122116/" alt="Fig 8. Electrophoresis of pHAGE-pre-miR-21 vector." /> |
</noscript> | </noscript> | ||
− | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/ | + | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2b0809140b7ad7ea3904a/1509077122116/" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2b0809140b7ad7ea3904a/1509077122116/" data-image-dimensions="182x99" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f2b0809140b7ad7ea3904a" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="Fig 8. Electrophoresis of pHAGE-pre-miR-21 vector." src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f2b0809140b7ad7ea3904a/1509077122116/?format=300w" data-image-resolution="300w"></div> |
<div class="image-caption-wrapper"> | <div class="image-caption-wrapper"> | ||
<div class="image-caption"> | <div class="image-caption"> | ||
<p> | <p> | ||
− | <em> | + | <em>Fig 8. Electrophoresis of pHAGE-pre-miR-21 vector.</em> |
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</p> | </p> | ||
</div> | </div> | ||
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</div> | </div> | ||
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− | <div class="sqs-block html-block sqs-block-html" data-block-type="2" id="block- | + | <div class="sqs-block html-block sqs-block-html" data-block-type="2" id="block-yui_3_17_2_94_1509069313608_178776"> |
<div class="sqs-block-content"> | <div class="sqs-block-content"> | ||
<p> | <p> | ||
− | <!--[if gte vml 1]> | + | <strong> |
− | + | <!--[if gte vml 1]> | |
− | + | <v:shape id="图片_x0020_1" | |
− | + | o:spid="_x0000_i1033" type="#_x0000_t75" style='width:337pt;height:71pt; | |
+ | visibility:visible'> | ||
+ | <v:imagedata src="file:////Users/tianyuwang/Library/Group%20Containers/UBF8T346G9.Office/msoclip1/01/clip_image017.png" | ||
o:title=""/> | o:title=""/> | ||
− | + | </v:shape> | |
− | + | <![endif]--> | |
+ | 1.3 Construction of pSB-miR-21-sponge-6s and pSB-miR-21-sponge-2s plasmid | ||
+ | </strong> | ||
+ | <br> | ||
+ | 1.3.1 Amplification of miR-21-sponge-6s and miR-21-sponge-2s fragment. | ||
</p> | </p> | ||
<p> | <p> | ||
<!--[if gte vml 1]> | <!--[if gte vml 1]> | ||
<v:shape | <v:shape | ||
− | id=" | + | id="图片_x0020_2" o:spid="_x0000_i1034" type="#_x0000_t75" style='width:181pt; |
− | <v:imagedata src="file:////Users/tianyuwang/Library/Group%20Containers/UBF8T346G9.Office/msoclip1/01/ | + | height:98pt;visibility:visible'> |
+ | <v:imagedata src="file:////Users/tianyuwang/Library/Group%20Containers/UBF8T346G9.Office/msoclip1/01/clip_image019.png" | ||
o:title=""/> | o:title=""/> | ||
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<p> | <p> | ||
− | + | In order to submit the parts to IGM2017, we amplified miR-21-sponge-6s and miR-21-sponge-2s using primers. After that, we purified the PCR products by PCR Purification Kit and digested them with restriction enzymes EcoR I and Pst I (Fig 9 A and B). | |
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− | <div class="sqs-block image-block sqs-block-image sqs-text-ready" data-block-type="5" id="block- | + | <div class="sqs-block image-block sqs-block-image sqs-text-ready" data-block-type="5" id="block-yui_3_17_2_4_1509162483656_19010"> |
− | <div class="sqs-block-content" id=" | + | <div class="sqs-block-content" id="yui_3_17_2_1_1509572305608_292"> |
− | <div class="image-block-outer-wrapper layout-caption-below design-layout-inline" id=" | + | <div class="image-block-outer-wrapper layout-caption-below design-layout-inline" id="yui_3_17_2_1_1509572305608_291"> |
− | <div class="intrinsic" style="max-width: | + | <div class="intrinsic" style="max-width:564.0px;" id="yui_3_17_2_1_1509572305608_290"> |
− | <div style="padding-bottom: | + | <div style="padding-bottom: 28.0142%; overflow: hidden;" class="image-block-wrapper has-aspect-ratio" data-description="<p> |
<em> | <em> | ||
− | Fig | + | Fig 9. Electrophoresis of miR-21-sponge-6s (A: lanes 1-3) and miR-21-sponge-2s (B: lanes 4-6) PCR product. |
</em> | </em> | ||
</p> | </p> | ||
− | " id=" | + | " id="yui_3_17_2_1_1509572305608_289"> |
<noscript> | <noscript> | ||
− | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/ | + | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f4028a652dea26877dff2d/1509163665493/9a.jpg" alt="Fig 9. Electrophoresis of miR-21-sponge-6s (A: lanes 1-3) and miR-21-sponge-2s (B: lanes 4-6) PCR product." /> |
</noscript> | </noscript> | ||
− | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/ | + | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f4028a652dea26877dff2d/1509163665493/9a.jpg" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f4028a652dea26877dff2d/1509163665493/9a.jpg" data-image-dimensions="564x158" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f4028a652dea26877dff2d" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="Fig 9. Electrophoresis of miR-21-sponge-6s (A: lanes 1-3) and miR-21-sponge-2s (B: lanes 4-6) PCR product." src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f4028a652dea26877dff2d/1509163665493/9a.jpg?format=750w" data-image-resolution="750w"></div> |
<div class="image-caption-wrapper"> | <div class="image-caption-wrapper"> | ||
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<p> | <p> | ||
<em> | <em> | ||
− | Fig | + | Fig 9. Electrophoresis of miR-21-sponge-6s (A: lanes 1-3) and miR-21-sponge-2s (B: lanes 4-6) PCR product. |
</em> | </em> | ||
</p> | </p> | ||
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</div> | </div> | ||
</div> | </div> | ||
− | <div class="sqs-block html-block sqs-block-html" data-block-type="2" id="block- | + | <div class="sqs-block html-block sqs-block-html" data-block-type="2" id="block-yui_3_17_2_4_1509162483656_19289"> |
<div class="sqs-block-content"> | <div class="sqs-block-content"> | ||
+ | <p>1.3.2 Digested pSB1C3 vector</p> | ||
<p> | <p> | ||
− | + | <!--[if gte vml 1]> | |
− | + | <v:shape id="_x0000_i1035" type="#_x0000_t75" | |
− | + | style='width:415pt;height:116pt'> | |
− | + | <v:imagedata src="file:////Users/tianyuwang/Library/Group%20Containers/UBF8T346G9.Office/msoclip1/01/clip_image021.png" | |
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o:title=""/> | o:title=""/> | ||
− | + | </v:shape> | |
− | + | <![endif]--> | |
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</p> | </p> | ||
<p> | <p> | ||
− | + | We digested the pSB1C3 vector with the same restriction enzymes EcoR I and Pst I (Fig 10). | |
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</p> | </p> | ||
</div> | </div> | ||
</div> | </div> | ||
− | <div class="sqs-block image-block sqs-block-image sqs-text-ready" data-block-type="5" id="block- | + | <div class="sqs-block image-block sqs-block-image sqs-text-ready" data-block-type="5" id="block-yui_3_17_2_4_1509162483656_30874"> |
− | <div class="sqs-block-content" id=" | + | <div class="sqs-block-content" id="yui_3_17_2_1_1509572305608_309"> |
− | <div class="image-block-outer-wrapper layout-caption-below design-layout-inline" id=" | + | <div class="image-block-outer-wrapper layout-caption-below design-layout-inline" id="yui_3_17_2_1_1509572305608_308"> |
− | <div class="intrinsic" style="max-width: | + | <div class="intrinsic" style="max-width:268.0px;" id="yui_3_17_2_1_1509572305608_307"> |
− | <div style="padding-bottom: | + | <div style="padding-bottom: 56.7164%; overflow: hidden;" class="image-block-wrapper has-aspect-ratio" data-description="<p> |
− | <em>Fig | + | <em>Fig 10. Electrophoresis of the digested pSB1C3 vector.</em> |
</p> | </p> | ||
− | " id=" | + | " id="yui_3_17_2_1_1509572305608_306"> |
<noscript> | <noscript> | ||
− | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/ | + | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f402b36926700aba0d0796/1509163705061/10.jpg" alt="Fig 10. Electrophoresis of the digested pSB1C3 vector." /> |
</noscript> | </noscript> | ||
− | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/ | + | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f402b36926700aba0d0796/1509163705061/10.jpg" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f402b36926700aba0d0796/1509163705061/10.jpg" data-image-dimensions="268x152" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f402b36926700aba0d0796" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="Fig 10. Electrophoresis of the digested pSB1C3 vector." src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f402b36926700aba0d0796/1509163705061/10.jpg?format=300w" data-image-resolution="300w"></div> |
<div class="image-caption-wrapper"> | <div class="image-caption-wrapper"> | ||
<div class="image-caption"> | <div class="image-caption"> | ||
<p> | <p> | ||
− | <em>Fig | + | <em>Fig 10. Electrophoresis of the digested pSB1C3 vector.</em> |
</p> | </p> | ||
</div> | </div> | ||
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</div> | </div> | ||
</div> | </div> | ||
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<div class="sqs-block-content"> | <div class="sqs-block-content"> | ||
<p> | <p> | ||
<!--[if gte vml 1]> | <!--[if gte vml 1]> | ||
<v:shape | <v:shape | ||
− | id=" | + | id="_x0000_i1036" type="#_x0000_t75" style='width:201pt;height:114pt'> |
− | <v:imagedata src="file:////Users/tianyuwang/Library/Group%20Containers/UBF8T346G9.Office/msoclip1/01/ | + | <v:imagedata src="file:////Users/tianyuwang/Library/Group%20Containers/UBF8T346G9.Office/msoclip1/01/clip_image023.png" |
o:title=""/> | o:title=""/> | ||
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<p> | <p> | ||
− | 1. | + | 1.3.3 Ligation of purified miR-21-sponge-6s and miR-21-sponge-2s fragment to pSB1C3 vector |
</p> | </p> | ||
<p> | <p> | ||
− | + | We ligated the purified miR-21-sponge-6s or miR-21-sponge-2s fragment to pSB1C3 vector, respectively. Then we selected the positive clones by PCR and sequencing (Fig 11 and 12). | |
</p> | </p> | ||
</div> | </div> | ||
</div> | </div> | ||
− | <div class="sqs-block image-block sqs-block-image sqs-text-ready" data-block-type="5" id="block- | + | <div class="sqs-block image-block sqs-block-image sqs-text-ready" data-block-type="5" id="block-yui_3_17_2_4_1509162483656_49246"> |
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− | + | </noscript> | |
− | + | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f402f510952624f5425864/1509163778597/11ab.jpg" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f402f510952624f5425864/1509163778597/11ab.jpg" data-image-dimensions="560x165" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f402f510952624f5425864" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="11ab.jpg" src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f402f510952624f5425864/1509163778597/11ab.jpg?format=750w" data-image-resolution="750w"></div> | |
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− | + | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403102774d1138b78c19a/1509163808883/11c.jpg" alt="11c.jpg" /> | |
− | + | </noscript> | |
− | + | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403102774d1138b78c19a/1509163808883/11c.jpg" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403102774d1138b78c19a/1509163808883/11c.jpg" data-image-dimensions="696x265" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f403102774d1138b78c19a" data-type="image" data-position-mode="standard" style="left: 0%; top: -0.0781863%; width: 100%; height: 100.156%; position: absolute;" alt="11c.jpg" src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403102774d1138b78c19a/1509163808883/11c.jpg?format=750w" data-image-resolution="750w"></div> | |
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+ | <div class="sqs-block image-block sqs-block-image sqs-text-ready" data-block-type="5" id="block-yui_3_17_2_4_1509162483656_59772"> | ||
+ | <div class="sqs-block-content" id="yui_3_17_2_1_1509572305608_360"> | ||
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− | + | <div class="intrinsic" style="max-width:259.0px;" id="yui_3_17_2_1_1509572305608_358"> | |
− | + | <div style="padding-bottom: 59.4595%; overflow: hidden;" class="image-block-wrapper has-aspect-ratio" data-description="<p> | |
+ | <em> | ||
+ | Fig 12. Electrophoresis of pSB1C3- miR-21-sponge-6s (lane 1, 2) and&nbsp; pSB1C3- miR-21-sponge-2s (lane 3, 4) vector. | ||
+ | </em> | ||
+ | </p> | ||
+ | " id="yui_3_17_2_1_1509572305608_357"> | ||
+ | <noscript> | ||
+ | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403336c31940534284984/1509163831033/12.jpg" alt="Fig 12. Electrophoresis of pSB1C3- miR-21-sponge-6s (lane 1, 2) and pSB1C3- miR-21-sponge-2s (lane 3, 4) vector." /> | ||
+ | </noscript> | ||
+ | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403336c31940534284984/1509163831033/12.jpg" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403336c31940534284984/1509163831033/12.jpg" data-image-dimensions="259x154" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f403336c31940534284984" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="Fig 12. Electrophoresis of pSB1C3- miR-21-sponge-6s (lane 1, 2) and pSB1C3- miR-21-sponge-2s (lane 3, 4) vector." src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403336c31940534284984/1509163831033/12.jpg?format=300w" data-image-resolution="300w"></div> | ||
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− | + | Fig 12. Electrophoresis of pSB1C3- miR-21-sponge-6s (lane 1, 2) and pSB1C3- miR-21-sponge-2s (lane 3, 4) vector. | |
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− | <strong>1.4</strong> | + | <strong>1.4</strong> |
− | The solid plates of each plasmid constructed (Fig 13) | + | The solid plates of each plasmid constructed (Fig 13) |
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− | <em>Fig 13 Solid plates of five plasmids</em> | + | <em>Fig 13 Solid plates of five plasmids</em> |
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− | </noscript> | + | </noscript> |
− | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403756c31940534284d6b/1509163900773/13.jpg" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403756c31940534284d6b/1509163900773/13.jpg" data-image-dimensions="779x576" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f403756c31940534284d6b" data-type="image" data-position-mode="standard" style="left: 0%; top: -0.0323577%; width: 100%; height: 100.065%; position: absolute;" alt="Fig 13 Solid plates of five plasmids" src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403756c31940534284d6b/1509163900773/13.jpg?format=750w" data-image-resolution="750w"></div> | + | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403756c31940534284d6b/1509163900773/13.jpg" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403756c31940534284d6b/1509163900773/13.jpg" data-image-dimensions="779x576" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f403756c31940534284d6b" data-type="image" data-position-mode="standard" style="left: 0%; top: -0.0323577%; width: 100%; height: 100.065%; position: absolute;" alt="Fig 13 Solid plates of five plasmids" src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403756c31940534284d6b/1509163900773/13.jpg?format=750w" data-image-resolution="750w"></div> |
− | <div class="image-caption-wrapper"> | + | <div class="image-caption-wrapper"> |
− | <div class="image-caption"> | + | <div class="image-caption"> |
− | <p> | + | <p> |
− | + | <em>Fig 13 Solid plates of five plasmids</em> | |
− | </p> | + | </p> |
− | </div> | + | </div> |
− | </div> | + | </div> |
− | </div> | + | </div> |
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<div class="sqs-block-content"> | <div class="sqs-block-content"> | ||
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height:169pt;visibility:visible'> | height:169pt;visibility:visible'> | ||
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− | <strong>2. The effect of miR-21 sponges in cells</strong> | + | <strong>2. The effect of miR-21 sponges in cells</strong> |
− | </p> | + | </p> |
− | <p> | + | <p> |
− | To detect the validity of our detection device, we transfected pEGFP-miR-21-sponge-6s or pEGFP-miR-21-sponge-2s (0.25ug /well) with pHAGE-puro (0.25ug /well, as negative control) into 293T cells in 24 well-plate, respectively. At same times, we transfected pEGFP-miR-21-sponge-6s or pEGFP-miR-21-sponge-2s (0.25ug/well) with pHAGE-pre-miR-21 (0.25ug/well) into 293T cells. Then the GFP fluorescence was observed under fluorescence microscopy (Fig 14 A,B,C,D). The result suggested our detection device worked very well, and overexpression of miR-21 can decrease the fluorescence intensity of pEGFP-miR-21-sponge-6s and pEGFP-miR-21-sponge-2s. | + | To detect the validity of our detection device, we transfected pEGFP-miR-21-sponge-6s or pEGFP-miR-21-sponge-2s (0.25ug /well) with pHAGE-puro (0.25ug /well, as negative control) into 293T cells in 24 well-plate, respectively. At same times, we transfected pEGFP-miR-21-sponge-6s or pEGFP-miR-21-sponge-2s (0.25ug/well) with pHAGE-pre-miR-21 (0.25ug/well) into 293T cells. Then the GFP fluorescence was observed under fluorescence microscopy (Fig 14 A,B,C,D). The result suggested our detection device worked very well, and overexpression of miR-21 can decrease the fluorescence intensity of pEGFP-miR-21-sponge-6s and pEGFP-miR-21-sponge-2s. |
− | </p> | + | </p> |
− | <p> | + | <p> |
− | And we also detected the fluorescence of GFP after transfection pEGFP-miR-21-sponge-6s or pEGFP- miR-21-sponge-2s with or without pHAGE-pre-miR-21 for 24 h by plate reader (SpectraMax i3), and observed that endogenous miR-21 in cells decreased the fluorescence of GFP (Fig 15). The fluorescence of GFP in cells transfect with pEGFP-miR-21-sponge-6s was lower in that of pEGFP-miR-21-sponge-2s, because pEGFP-miR-21-sponge-6s contains six miR-21 binding sites. These results suggested that sponges with six binding sites produced stronger derepressiveeffects than sponges with two binding sites. | + | And we also detected the fluorescence of GFP after transfection pEGFP-miR-21-sponge-6s or pEGFP- miR-21-sponge-2s with or without pHAGE-pre-miR-21 for 24 h by plate reader (SpectraMax i3), and observed that endogenous miR-21 in cells decreased the fluorescence of GFP (Fig 15). The fluorescence of GFP in cells transfect with pEGFP-miR-21-sponge-6s was lower in that of pEGFP-miR-21-sponge-2s, because pEGFP-miR-21-sponge-6s contains six miR-21 binding sites. These results suggested that sponges with six binding sites produced stronger derepressiveeffects than sponges with two binding sites. |
− | </p> | + | </p> |
</div> | </div> | ||
</div> | </div> | ||
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− | <em> | + | <em> |
− | Fig 14. &nbsp;The images of 293T cells transfected different plasmids A. pEGFP- miR-21-sponge-6s and pHAGE-puro co-transfected. B. pEGFP-miR-21-sponge-2s and pHAGE-puro co-transfected. C. pEGFP-miR-21-sponge-6s and pHAGE-pre-miR-21 co-transfected. D. pEGFP- miR-21-sponge-2s and pHAGE-pre-miR-21 co-transfected, Bar = 100mm . | + | Fig 14. &nbsp;The images of 293T cells transfected different plasmids A. pEGFP- miR-21-sponge-6s and pHAGE-puro co-transfected. B. pEGFP-miR-21-sponge-2s and pHAGE-puro co-transfected. C. pEGFP-miR-21-sponge-6s and pHAGE-pre-miR-21 co-transfected. D. pEGFP- miR-21-sponge-2s and pHAGE-pre-miR-21 co-transfected, Bar = 100mm . |
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− | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403bce2c483f7f6cbd90a/1509164327754/14.jpg" alt="Fig 14. The images of 293T cells transfected different plasmids A. pEGFP- miR-21-sponge-6s and pHAGE-puro co-transfected. B. pEGFP-miR-21-sponge-2s and pHAGE-puro co-transfected. C. pEGFP-miR-21-sponge-6s and pHAGE-pre-miR-21 co-transfected. D. pEGFP- miR-21-sponge-2s and pHAGE-pre-miR-21 co-transfected, Bar = 100mm ." /> | + | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403bce2c483f7f6cbd90a/1509164327754/14.jpg" alt="Fig 14. The images of 293T cells transfected different plasmids A. pEGFP- miR-21-sponge-6s and pHAGE-puro co-transfected. B. pEGFP-miR-21-sponge-2s and pHAGE-puro co-transfected. C. pEGFP-miR-21-sponge-6s and pHAGE-pre-miR-21 co-transfected. D. pEGFP- miR-21-sponge-2s and pHAGE-pre-miR-21 co-transfected, Bar = 100mm ." /> |
− | </noscript> | + | </noscript> |
− | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403bce2c483f7f6cbd90a/1509164327754/14.jpg" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403bce2c483f7f6cbd90a/1509164327754/14.jpg" data-image-dimensions="334x333" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f403bce2c483f7f6cbd90a" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="Fig 14. The images of 293T cells transfected different plasmids A. pEGFP- miR-21-sponge-6s and pHAGE-puro co-transfected. B. pEGFP-miR-21-sponge-2s and pHAGE-puro co-transfected. C. pEGFP-miR-21-sponge-6s and pHAGE-pre-miR-21 co-transfected. D. pEGFP- miR-21-sponge-2s and pHAGE-pre-miR-21 co-transfected, Bar = 100mm ." src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403bce2c483f7f6cbd90a/1509164327754/14.jpg?format=500w" data-image-resolution="500w"></div> | + | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403bce2c483f7f6cbd90a/1509164327754/14.jpg" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403bce2c483f7f6cbd90a/1509164327754/14.jpg" data-image-dimensions="334x333" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f403bce2c483f7f6cbd90a" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="Fig 14. The images of 293T cells transfected different plasmids A. pEGFP- miR-21-sponge-6s and pHAGE-puro co-transfected. B. pEGFP-miR-21-sponge-2s and pHAGE-puro co-transfected. C. pEGFP-miR-21-sponge-6s and pHAGE-pre-miR-21 co-transfected. D. pEGFP- miR-21-sponge-2s and pHAGE-pre-miR-21 co-transfected, Bar = 100mm ." src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403bce2c483f7f6cbd90a/1509164327754/14.jpg?format=500w" data-image-resolution="500w"></div> |
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− | <div class="image-caption"> | + | <div class="image-caption"> |
− | <p> | + | <p> |
− | <em> | + | <em> |
− | + | Fig 14. The images of 293T cells transfected different plasmids A. pEGFP- miR-21-sponge-6s and pHAGE-puro co-transfected. B. pEGFP-miR-21-sponge-2s and pHAGE-puro co-transfected. C. pEGFP-miR-21-sponge-6s and pHAGE-pre-miR-21 co-transfected. D. pEGFP- miR-21-sponge-2s and pHAGE-pre-miR-21 co-transfected, Bar = 100mm . | |
− | </em> | + | </em> |
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− | <em> | + | <em> |
− | Fig 15. The fluorescence of GFP after co-transfection pEGFP-miR-21-sponge-6s or pEGFP- miR-21-sponge-2s with or without pHAGE-pre-miR-21 . | + | Fig 15. The fluorescence of GFP after co-transfection pEGFP-miR-21-sponge-6s or pEGFP- miR-21-sponge-2s with or without pHAGE-pre-miR-21 . |
− | </em> | + | </em> |
− | </p> | + | </p> |
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− | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403fc27ef2d09a2192ecf/1509164034255/15.jpg" alt="Fig 15. The fluorescence of GFP after co-transfection pEGFP-miR-21-sponge-6s or pEGFP- miR-21-sponge-2s with or without pHAGE-pre-miR-21 ." /> | + | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403fc27ef2d09a2192ecf/1509164034255/15.jpg" alt="Fig 15. The fluorescence of GFP after co-transfection pEGFP-miR-21-sponge-6s or pEGFP- miR-21-sponge-2s with or without pHAGE-pre-miR-21 ." /> |
− | </noscript> | + | </noscript> |
− | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403fc27ef2d09a2192ecf/1509164034255/15.jpg" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403fc27ef2d09a2192ecf/1509164034255/15.jpg" data-image-dimensions="495x283" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f403fc27ef2d09a2192ecf" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="Fig 15. The fluorescence of GFP after co-transfection pEGFP-miR-21-sponge-6s or pEGFP- miR-21-sponge-2s with or without pHAGE-pre-miR-21 ." src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403fc27ef2d09a2192ecf/1509164034255/15.jpg?format=500w" data-image-resolution="500w"></div> | + | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403fc27ef2d09a2192ecf/1509164034255/15.jpg" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403fc27ef2d09a2192ecf/1509164034255/15.jpg" data-image-dimensions="495x283" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f403fc27ef2d09a2192ecf" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="Fig 15. The fluorescence of GFP after co-transfection pEGFP-miR-21-sponge-6s or pEGFP- miR-21-sponge-2s with or without pHAGE-pre-miR-21 ." src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f403fc27ef2d09a2192ecf/1509164034255/15.jpg?format=500w" data-image-resolution="500w"></div> |
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− | <em> | + | <em> |
− | Fig 15. The fluorescence of GFP after co-transfection pEGFP-miR-21-sponge-6s or pEGFP- miR-21-sponge-2s with or without pHAGE-pre-miR-21 . | + | Fig 15. The fluorescence of GFP after co-transfection pEGFP-miR-21-sponge-6s or pEGFP- miR-21-sponge-2s with or without pHAGE-pre-miR-21 . |
− | </em> | + | </em> |
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<strong> | <strong> | ||
− | 2.1 The effect of miR-21 sponges as a monitor to detect the expression of miR-21 | + | 2.1 The effect of miR-21 sponges as a monitor to detect the expression of miR-21 |
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− | copies/ul= (6.02×1023)×(plasmids concentrations ng/ul×10-9)/(DNA length×660) | + | copies/ul= (6.02×1023)×(plasmids concentrations ng/ul×10-9)/(DNA length×660) |
− | </em> | + | </em> |
</strong> | </strong> | ||
</p> | </p> | ||
<p> | <p> | ||
− | The standard curve of miR-21-sponge-6s and miR-21-sponge-2s were made by EXCEL, respectively (Fig 16 and 17). We find that when miR-21 copies changed the slope of the standard curve of miR-21-sponge- | + | The standard curve of miR-21-sponge-6s and miR-21-sponge-2s were made by EXCEL, respectively (Fig 16 and 17). We find that when miR-21 copies changed the slope of the standard curve of miR-21-sponge-2s was greater than miR-21-sponge-6s which indicated miR-21-sponge-2s is more sensitive than miR-21-sponge6s. However, the correlation coefficient (R2 value) of miR-21-sponge-6s was 0.9993 and R2 value of miR-21-sponge-6s was 0.8995. The R2 value of miR-21-sponge-6s is better than miR-21-sponge-2s. |
</p> | </p> | ||
</div> | </div> | ||
</div> | </div> | ||
<div class="sqs-block image-block sqs-block-image sqs-text-ready" data-block-type="5" id="block-yui_3_17_2_4_1509162483656_114255"> | <div class="sqs-block image-block sqs-block-image sqs-text-ready" data-block-type="5" id="block-yui_3_17_2_4_1509162483656_114255"> | ||
− | <div class="sqs-block-content" id=" | + | <div class="sqs-block-content" id="yui_3_17_2_1_1509572305608_428"> |
− | <div class="image-block-outer-wrapper layout-caption-below design-layout-inline" id=" | + | <div class="image-block-outer-wrapper layout-caption-below design-layout-inline" id="yui_3_17_2_1_1509572305608_427"> |
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− | <em> | + | <em> |
− | Fig 16. The effect of pEGFP-miR-21-sponge-6s or pEGFP-miR-21-sponge-2s on the correlative between fluorescence value of GFP and copy numbers of miR-21. | + | Fig 16. The effect of pEGFP-miR-21-sponge-6s or pEGFP-miR-21-sponge-2s on the correlative between fluorescence value of GFP and copy numbers of miR-21. |
− | </em> | + | </em> |
− | </p> | + | </p> |
− | " id=" | + | " id="yui_3_17_2_1_1509572305608_425"> |
− | <noscript> | + | <noscript> |
− | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/ | + | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f7f4fd8e7b0fa62a247fc9/1509422334420/aaa.jpg" alt="Fig 16. The effect of pEGFP-miR-21-sponge-6s or pEGFP-miR-21-sponge-2s on the correlative between fluorescence value of GFP and copy numbers of miR-21." /> |
− | </noscript> | + | </noscript> |
− | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/ | + | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f7f4fd8e7b0fa62a247fc9/1509422334420/aaa.jpg" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f7f4fd8e7b0fa62a247fc9/1509422334420/aaa.jpg" data-image-dimensions="401x205" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f7f4fd8e7b0fa62a247fc9" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="Fig 16. The effect of pEGFP-miR-21-sponge-6s or pEGFP-miR-21-sponge-2s on the correlative between fluorescence value of GFP and copy numbers of miR-21." src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f7f4fd8e7b0fa62a247fc9/1509422334420/aaa.jpg?format=500w" data-image-resolution="500w"></div> |
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− | <div class="image-caption"> | + | <div class="image-caption"> |
− | <p> | + | <p> |
− | <em> | + | <em> |
− | Fig 16. The effect of pEGFP-miR-21-sponge-6s or pEGFP-miR-21-sponge-2s on the correlative between fluorescence value of GFP and copy numbers of miR-21. | + | Fig 16. The effect of pEGFP-miR-21-sponge-6s or pEGFP-miR-21-sponge-2s on the correlative between fluorescence value of GFP and copy numbers of miR-21. |
− | </em> | + | </em> |
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<div class="sqs-block image-block sqs-block-image sqs-text-ready" data-block-type="5" id="block-yui_3_17_2_4_1509162483656_124171"> | <div class="sqs-block image-block sqs-block-image sqs-text-ready" data-block-type="5" id="block-yui_3_17_2_4_1509162483656_124171"> | ||
− | <div class="sqs-block-content" id=" | + | <div class="sqs-block-content" id="yui_3_17_2_1_1509572305608_445"> |
− | <div class="image-block-outer-wrapper layout-caption-below design-layout-inline" id=" | + | <div class="image-block-outer-wrapper layout-caption-below design-layout-inline" id="yui_3_17_2_1_1509572305608_444"> |
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− | <em> | + | <em> |
− | Fig 17. The standard curve of miR-21-sponge-6s and miR-21-sponge-2s. | + | Fig 17. The standard curve of miR-21-sponge-6s and miR-21-sponge-2s. |
− | </em> | + | </em> |
</p> | </p> | ||
− | " id=" | + | " id="yui_3_17_2_1_1509572305608_442"> |
<noscript> | <noscript> | ||
− | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/ | + | <img src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f7ebc06926704f3555ecd8/1509419971690/17%282%29.jpg" alt="Fig 17. The standard curve of miR-21-sponge-6s and miR-21-sponge-2s." /> |
</noscript> | </noscript> | ||
− | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/ | + | <img class="thumb-image loaded" data-src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f7ebc06926704f3555ecd8/1509419971690/17%282%29.jpg" data-image="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f7ebc06926704f3555ecd8/1509419971690/17%282%29.jpg" data-image-dimensions="405x368" data-image-focal-point="0.5,0.5" data-load="false" data-image-id="59f7ebc06926704f3555ecd8" data-type="image" data-position-mode="standard" style="left: 0%; top: 0%; width: 100%; height: 100%; position: absolute;" alt="Fig 17. The standard curve of miR-21-sponge-6s and miR-21-sponge-2s." src="https://static1.squarespace.com/static/598d6f47ff7c50fa2d55f1dc/t/59f7ebc06926704f3555ecd8/1509419971690/17%282%29.jpg?format=500w" data-image-resolution="500w"></div> |
<div class="image-caption-wrapper"> | <div class="image-caption-wrapper"> | ||
<div class="image-caption"> | <div class="image-caption"> | ||
− | <p> | + | <p> |
− | <em> | + | <em> |
− | Fig 17. The standard curve of miR-21-sponge-6s and miR-21-sponge-2s. | + | Fig 17. The standard curve of miR-21-sponge-6s and miR-21-sponge-2s. |
− | </em> | + | </em> |
− | </p> | + | </p> |
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<p> | <p> | ||
− | <strong>Conclusions and | + | <strong>Conclusions and perspectives</strong> |
− | < | + | |
+ | </p> | ||
+ | <p> | ||
+ | The results reported here demonstrate that miRNA sponge may be a monitor to detect the expression of miRNA in cells. And we also suggested the slope of the standard curve of miR-21-sponge-2s is better than miR-21-sponge-6s, suggesting the more sensitive of miR-21-sponge-2s as a monitor. Our results for the first time to evaluate the possibility of miRNA sponge for detecting miRNA and provide a new method for diagnosis miRNA in the future. However, there are still lots of issues relative to this new method that we need to consider. Firstly, we should evaluate the sensitivity and specificity of this technique by compare with other method including real-time PCR. Next, whether miRNA sponge contained two binding sites is the best monitor should be considered and tested. More strategies should be thought to improve the sensitivity and specificity of this technique by synthetic biology. | ||
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Latest revision as of 00:45, 2 November 2017