Difference between revisions of "Team:BNU-China/HP/Gold Integrated"

 
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                <meta name="author" content="Ziyu Liu(刘梓钰),Zhaodong Wang(王兆栋),Xizong Zhang(张溪棕)"/>
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                  <ul>
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                    <li><p data-id = "#title1">Change of Material</p></li>
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                    <li><p data-id = "#title2">Improvement on Experiment Protocol</p></li>
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                    <li><p data-id = "#title3">Modification on Enzyme Choice</p></li>
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<h1 style="font-size:52px !important;">Integrated Human Practice</h1>
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        <p>This year our integrated human practice work concentrated on improving the feasibility of our project and exploring its potentials. We contacted experts and technicians to discuss our design and experiment plan with them. Results of these work have been proven helpful to the adjustment of the schematic design and the detailed experiment procedure.
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        <h2 id="title1">Change of Material -- Interview with Prof. Meng Wenxiang</h2>
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        <p>After the literature research phase, we found microtubule to be an ideal material for our extracellular enzyme loading scaffold for its self-assembly feature and its employing of modifiable subunits. Therefore, we scheduled an interview with professor Meng Wenxiang, an expert on microtubule, before we initiated our experiments.</p>
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        <img style="width:42%;left:29%;" src="https://static.igem.org/mediawiki/2017/b/bb/T--BNU-China--IHP1.jpg" alt="Sorry, the image is not spupported by your browser.">
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        <h4>With Prof. Meng Wenxiang at Institute of Genetics and Developmental Biology</h4>
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        <p>To our disappointment, professor Meng directly pointed out a fundamental flaw in our plan, which was the stability of microtubule could not meet the ideal requirement of the extracellular scaffold. According to his research data, microtubule could not exist in vitro for more than a week even with the help of microtubule-stabilizing drugs, such as taxol<sup>®</sup> and its analogues. This defect of microtubule invalidated its potential as the extracellular scaffold material, but it did inspire us to look for a similar but more stable material. So we began our search for materials that met these requirements. Shortly after, we found flagellar filament to be the stable self-assembled biopolymer we wanted. Thanks to professor Meng's advice, we eliminated one possible systematical cause for failure in advance.</p>
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        <h2 id="title2">Improvement on Experiment Protocol -- Interview with Prof. Zhang Linqi and Her PhD. Students</h2>
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        <p>Since we were new to this technique, and it's imperative for us to enlarge the knowledge base we had on this technique. Hence, we went to Tsinghua University to consult professor Zhang Linqi and her PhD. students, who had tons of experiences and knowledge on this technique. </p>
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        <h4>With PhD. Zhou Panpan at Qinghua University</h4>
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        <p>After our presentation, we received positive feedbacks for professor Zhang and doctor Zhou Panpan. They both considered our project to be promising and would severely increase the capacity of the original system. As for the problems we had encountered in the wet lab, they kindly offered us with practical solutions, helpful advices, and their first-hand experience, which significantly elevated the efficiency of our experiment process.</p>
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        <h2 id="title3">Modification on Enzyme Choice -- Interview with Director of Research of Beijing Smistyle Sci. & Tech. Development Co., LTD.</h2>
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        <p>According to our research findings, Xynase, an enzyme from cellulase enzyme system, had been applied to substitute the variable D2 domain of flagellin FliC, and the adapted falgellins were successfully assembled into a functioning nano enzyme stick. Then it occurred to us to use the cellulose system to build a prototype to test if our approach can increase the catalytic efficiency. To better define the contrast group for comparison and to better portrait the actual using condition, we contacted Beijing Smistyle Sci. & Tech. Development Co., LTD, whose products covered all three enzymes in the cellulase enzyme system. We made an appointment with Doc. Zhao Lifang, the director of research of Smistyle.</p>
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        <img style="width:42%;left:29%;" src="https://static.igem.org/mediawiki/2017/4/4a/T--BNU-China--IHP3.jpg" alt="Sorry, the image is not spupported by your browser.">
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        <h4>With director of research at Beijing Smistyle Sci. & Tech. Development Co., LTD</h4>
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        <p>Doc. Zhao listened to our power-point presentation attentively, and expressed her sincere appreciation for our project. Nevertheless, she indicated that the application of our improved system on cellulase enzyme system wouldn't fully exhibit the advantages of our improvement. The cost of manufacturing these enzymes had already been optimized to be very low, which made it economically unwise to go through sophisticated recycle procedure for repeated use instead of simply producing a large quantity of them as disposable additions.</p>
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        <p>At the end of the interview, Doc. Zhao shared her thoughts on more suitable application for our system. Obviously, our target enzyme should be the ones that are hard to produce but highly valuable. This would make the choice of recycle with our system preferable than producing in quantity with a high cost. With these guidelines, we selected <a href="http://parts.igem.org/Part:BBa_K1921003">PETase</a>, which can hydrolyze PET in low temperature.</p>
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    <p style="text-align: center;color: #e5b051;padding-top: 5px;margin-top:75px;">Copyright © 2017 <a href="https://2017.igem.org/Team:BNU-China" style="color: #9E2B20;text-decoration: none;opacity:0.8;">BNU-China</a>&nbsp;All rights reserved.</p>
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    <p style="text-align: center;color: #e5b051;margin-bottom:-20px;">If you like this page, you can contact us: <span style="color:#9E2B20;text-decoration: none;opacity:0.8;">bnu_igem@163.com</a></span>
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                <li id="w_menu1"><a class="w_a" href="https://2017.igem.org/Team:BNU-China/Team">Team</a></li>
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            <ul class="group-list">
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                <li data-group="all">All</li>
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                <li data-group="wiki">Wiki</li>
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                <li data-group="graphic">graphic</li>
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            <div class="team-row">
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                <div class="team-member lab" name="rongnan">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/e/e1/T--BNU-China--rn1.jpg" />
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                    <h1 class="member-name">Nan Rong</h1>
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                    <p class="member-intro">The leader of BNU-China 2017. She is a junior student majoring in biotechnology and has deep interests in Synthetic Biology. She gave all her enthusiasm and energy to iGEM. Responsible for the design of the project and lab management and many other works.</p>
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                    <p class="member-cute"></p>
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                </div>
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                <div class="team-member lab" name="houyutong">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/7/77/T--BNU-China--hyt1.jpg" />
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                    <h1 class="member-name">Yutong Hou</h1>
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                    <p class="member-intro">Yutong Hou is a junior student majoring in Biotechnology, doing her best to the team. As a vice leader of BNU-China, she arranges the routine works in lab, and never gives up to find any possible solution for the project and stays optimistic between failure and failure.</p>
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                    <p class="member-cute"></p>
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                </div>
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                <div class="team-member lab" name="zengxiaomin">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/2/2e/T--BNU-China--zxm1.jpg" />
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                    <h1 class="member-name">Xiaomin Zeng</h1>
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                    <p class="member-intro">Hello, it’s xiaomin here, one of three deputy team leaders of BNU-iGEM. She’s in charge of financial affairs and takes part in wet experiments. It’s one of her most memorable experience in the undergraduate days to be an iGEMer and work with many excellent peers in BNU.</p>
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                    <p class="member-cute"></p>
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                </div>
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                <div class="team-member lab hp" name="lvsuyue">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/7/7b/T--BNU-China--lvsuyue1.jpg" />
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                    <h1 class="member-name">Suyue Lv</h1>
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                    <p class="member-intro">Suyue Lyu is a junior student studying biotechnology with interests in biological pharmaceutical. She’s done plenty of lab work, and meanwhile she’s in charge of human practice module. She’s truly thankful to all her companions for this wonderful journey together.</p>
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                    <p class="member-cute"></p>
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                </div>
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                <div class="team-member lab" name="guoyucong">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/3/36/T--BNU-China--gyc1.jpg" />
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                    <h1 class="member-name">Yucong Guo</h1>
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                    <p class="member-intro">A junior biology student. She participated in wet experiments and also took part in financial team. It is an unforgettable experience for her to be a member of BNU-China, where she made great progress in experiments and met so many excellent peers.</p>
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                    <p class="member-cute"></p>
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                </div>
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                <div class="team-member lab" name="xingjiawei">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/f/f1/T--BNU-China--xjw1.jpg" />
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                    <h1 class="member-name">Jiawei Xing</h1>
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                    <p class="member-intro">Jiawei Xing is in charge of the improvement, and he also participates in other wet experiments. He always has a passion for biological sciences, and he always does his best in any experiments. The experience in iGEM will become one of his greatest experiences.</p>
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                    <p class="member-cute"></p>
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                </div>
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                <div class="team-member lab" name="yujundan">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/6/6a/T--BNU-China--yjd1.jpg" />
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                    <h1 class="member-name">Jundan Yu</h1>
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                    <p class="member-intro">Jundan Yu is a junior student majoring in Biotechnology. In BNU-China, he develops the molecular biology section in wet lab. He is very grateful to his teammates for his help, and he gains not only the scientific experimental skills.</p>
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                    <p class="member-cute"></p>
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                </div>
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                <div class="team-member lab hp" name="xinglinqing">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/5/5a/T--BNU-China--xlq1.jpg" />
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                    <h1 class="member-name">Linqing Xing</h1>
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                    <p class="member-intro">A junior student from Beijing normal university. She is interested in many aspects of life science, especially those which will benefit human health. She mainly partcipated in the construction of the carriers as well as some work in Human Practice.</p>
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                    <p class="member-cute"></p>
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                </div>
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                <div class="team-member lab graphic hp" name="chuhuanhuan">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/1/12/T--BNU-China--chh1.jpg" />
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                    <h1 class="member-name">Huanhuan Chu</h1>
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                    <p class="member-intro">Huanhuan Chu is a junior student majoring in bioscience who is responsible for human practice this year. She also focuses on the molecular biology section in wet lab. Her positive nature engages everyone she meets. A responsible and nice biology teacher in the future!</p>
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                    <p class="member-cute"></p>
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                </div>
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                <!-- <div class="team-member lab model" name="caolei">
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                    <img class="member-img" src="" />
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                    <h1 class="member-name">Lei Cao</h1>
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                    <p class="member-intro">Lei Cao is the heaviest junior student in the team. He becomes a member of BNU-iGem because he wants to learn more about modeling and interesting ideas. He wants to be a rich and humorous man in the future, or maybe, at least, a rich man……</p>
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                    <p class="member-cute"></p>
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                </div> -->
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                <div class="team-member model" name="lishangyang">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/6/61/T--BNU-China--lsy1.jpg" />
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                    <h1 class="member-name">Shangyang Li</h1>
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                    <p class="member-intro">Shangyang Li is a junior student majoring in Physics, who mainly focuses on the modelling and research in Biophysics and Condensed Matter Physics. As a big fan of Kyrie Irving, he can’t wait to watch the NBA game between Celtics and Lakers in TD Garden this year!</p>
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                    <p class="member-cute"></p>
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                </div>
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                <div class="team-member model" name="tiangengshuo">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/9/9c/T--BNU-China--tgs1.jpg" />
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                    <h1 class="member-name">Gengshuo Tian</h1>
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                    <p class="member-intro">Gengshuo Tian is a junior student majoring in mathematics. In BNU-China, he develops mathematical models to assist the team's endeavors. He is a firm believer of quantitative analysis in biological sciences and enjoys working with teammates from various disciplines.</p>
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                    <p class="member-cute"></p>
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                </div>
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                <!-- <div class="team-member lab hp" name="liruoran">
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                    <img class="member-img" src="" />
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                    <h1 class="member-name">Ruoyan Li</h1>
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                    <p class="member-intro">Ruoyan Li is a freshman majoring in mathematics. Resulting from her enthusiasm about biology, she became a member of the big family. Thanks to seniors’ help, she has gined both experimental skills and communication skills during vector construction and HP. She appreciates every teammate sincerely. </p>
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                    <p class="member-cute"></p>
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                </div> -->
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                <div class="team-member lab hp" name="dongxiyu">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/2/2e/T--BNU-China--dxy1.jpg" />
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                    <h1 class="member-name">Xiyu Dong</h1>
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                    <p class="member-intro">Xiyu Dong is the tallest girl in the team. She's a young and naive 'chemistryer' who loves biology as well as chemistry. Learned a lot of experimental skills with the help of seniors. Did the investigation on biological enzyme preparation as a member of the HP group. </p>
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                    <p class="member-cute"></p>
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                </div>
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                <div class="team-member lab" name="zhaorongwei">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/2/29/T--BNU-China--zrw1.jpg" />
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                    <h1 class="member-name">Rongwei Zhao</h1>
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                    <p class="member-intro">Rongwei Zhao is in her third year of bioscience. She carries on wet lab experiments, being confident to handle well with various tasks and making efforts to catch up with our project. She is delighted to be an igemer and honor to be a member of this passionate family. </p>
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                    <p class="member-cute"></p>
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                </div>
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                <!-- <div class="team-member lab" name="cheminhua">
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                    <img class="member-img" src="" />
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                    <h1 class="member-name">Minhua Che</h1>
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                    <p class="member-intro">Minhua Che is a junior bio-science student of Beijing Normal University. She mainly worked for wet lab part including designing the experiment, expressing the proteins and validating the proteins functions. It’s a wonderful experience for her to join the BNU-China iGEM family!</p>
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                    <p class="member-cute"></p>
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                </div> -->
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                <!-- <div class="team-member lab" name="yaowenxi">
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                    <img class="member-img" src="" />
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                    <h1 class="member-name">Wenxi Yao</h1>
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                    <p class="member-intro">Wenxi Yao is a humorous girl who majors in bioscience. She gains a lot this year, such as experimental techniques and friendship with teammates. She does some work in wet lab and tries her best to contribute to WIKI. It’s an unforgettable experience for her to join BNU-China!</p>
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                    <p class="member-cute"></p>
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                </div> -->
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                <div class="team-member lab hp" name="wanyuanqiang">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/7/7b/T--BNU-China--wyq1.jpg" />
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                    <h1 class="member-name">Yuanqiang Wan</h1>
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                    <p class="member-intro">Now, it is Yuanqiang Wan’s show time. WYQ is a junior student who major in physical geography. In our team, he mainly work in wet experiment and human practice. He has deep interests in biogeography. And then he joins in BNU-China without rhyme.</p>
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                    <p class="member-cute"></p>
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                </div>
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                <div class="team-member lab graphic" name="mijunhui">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/b/b7/T--BNU-China--mjh1.jpg" />
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                    <h1 class="member-name">Junhui Mi</h1>
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                    <p class="member-intro">She is MI Jun-Hui at BNU-China majoring in Bioscience. She is a wet lab member as well as an art designer in the team. She enjoys working with many outstanding partners from different aspects in the iGEM team. She also likes painting and photographing in her spare time.</p>
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                    <p class="member-cute"></p>
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                </div>
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                <div class="team-member lab graphic" name="gufei">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/3/3e/T--BNU-China--gf1.jpg" />
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                    <h1 class="member-name">Fei Gu</h1>
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                    <p class="member-intro">Though he majors in psychology, he participates in iGEM due to interest in biology. Mainly working for wet lab part, he has also taught applications of synthetic biology in Bayi high school for human practice part, which will be precious memories.</p>
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                    <p class="member-cute"></p>
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                <div class="team-member lab graphic" name="wangmengmeng">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/4/4f/T--BNU-China--wmm1.jpg" />
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                    <h1 class="member-name">Mengmeng Wang</h1>
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                    <p class="member-intro">Wang Mengmeng is a guy who is responsible for art designing. After drawing many pictures,she is just like a dried herring now. The crowning point of the girl is that she can finish work on time and doesn't need to modify her drawing again and again. </p>
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                    <p class="member-cute"></p>
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                </div>
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                <div class="team-member wiki" name="liuziyu">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/e/ee/T--BNU-China--lzy1.jpg" />
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                    <h1 class="member-name">Ziyu Liu</h1>
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                    <p class="member-intro">Ziyu Liu is a sophomore majoring in Computer Science. As the leader of wiki group, she takes charge of building web pages and cooperating with other groups. Working with excellent people from various disciplines in iGEM will be the most memorable experience in her college career.</p>
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                    <p class="member-cute"></p>
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                </div>
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                <div class="team-member wiki" name="wangzhaodong">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/d/df/T--BNU-China--wzd1.jpg" />
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                    <h1 class="member-name">Zhaodong Wang</h1>
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                    <p class="member-intro">Zhaodong Wang is a sophomore major in computer science. Due to his interest in coding, he became a member of the big family. During these months' study, he has been able to make some magic to his pages. He enjoys the time with the team and he is willing to learn more algorithms  to make more attractive websites.</p>
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                    <p class="member-cute"></p>
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                </div>
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                <div class="team-member wiki" name="zhangxizong">
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                    <img class="member-img" src="https://static.igem.org/mediawiki/2017/6/66/T--BNU-China--zxz1.jpg" />
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                    <h1 class="member-name">Xizong Zhang</h1>
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                    <p class="member-intro">Xizong Zhang, a sophomore student majoring in Computer Science and Technology. He has keen interest in the Internet and Web Design. In BNU-China, he is a member of the wiki group, and works with his excellent teammates to construct pretty websites. </p>
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                    <p class="member-cute"></p>
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Latest revision as of 01:46, 2 November 2017

BNU-China ">

Integrated Human Practice

This year our integrated human practice work concentrated on improving the feasibility of our project and exploring its potentials. We contacted experts and technicians to discuss our design and experiment plan with them. Results of these work have been proven helpful to the adjustment of the schematic design and the detailed experiment procedure.

Change of Material -- Interview with Prof. Meng Wenxiang

After the literature research phase, we found microtubule to be an ideal material for our extracellular enzyme loading scaffold for its self-assembly feature and its employing of modifiable subunits. Therefore, we scheduled an interview with professor Meng Wenxiang, an expert on microtubule, before we initiated our experiments.

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With Prof. Meng Wenxiang at Institute of Genetics and Developmental Biology

To our disappointment, professor Meng directly pointed out a fundamental flaw in our plan, which was the stability of microtubule could not meet the ideal requirement of the extracellular scaffold. According to his research data, microtubule could not exist in vitro for more than a week even with the help of microtubule-stabilizing drugs, such as taxol® and its analogues. This defect of microtubule invalidated its potential as the extracellular scaffold material, but it did inspire us to look for a similar but more stable material. So we began our search for materials that met these requirements. Shortly after, we found flagellar filament to be the stable self-assembled biopolymer we wanted. Thanks to professor Meng's advice, we eliminated one possible systematical cause for failure in advance.

Improvement on Experiment Protocol -- Interview with Prof. Zhang Linqi and Her PhD. Students

Since we were new to this technique, and it's imperative for us to enlarge the knowledge base we had on this technique. Hence, we went to Tsinghua University to consult professor Zhang Linqi and her PhD. students, who had tons of experiences and knowledge on this technique.

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With PhD. Zhou Panpan at Qinghua University

After our presentation, we received positive feedbacks for professor Zhang and doctor Zhou Panpan. They both considered our project to be promising and would severely increase the capacity of the original system. As for the problems we had encountered in the wet lab, they kindly offered us with practical solutions, helpful advices, and their first-hand experience, which significantly elevated the efficiency of our experiment process.

Modification on Enzyme Choice -- Interview with Director of Research of Beijing Smistyle Sci. & Tech. Development Co., LTD.

According to our research findings, Xynase, an enzyme from cellulase enzyme system, had been applied to substitute the variable D2 domain of flagellin FliC, and the adapted falgellins were successfully assembled into a functioning nano enzyme stick. Then it occurred to us to use the cellulose system to build a prototype to test if our approach can increase the catalytic efficiency. To better define the contrast group for comparison and to better portrait the actual using condition, we contacted Beijing Smistyle Sci. & Tech. Development Co., LTD, whose products covered all three enzymes in the cellulase enzyme system. We made an appointment with Doc. Zhao Lifang, the director of research of Smistyle.

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With director of research at Beijing Smistyle Sci. & Tech. Development Co., LTD

Doc. Zhao listened to our power-point presentation attentively, and expressed her sincere appreciation for our project. Nevertheless, she indicated that the application of our improved system on cellulase enzyme system wouldn't fully exhibit the advantages of our improvement. The cost of manufacturing these enzymes had already been optimized to be very low, which made it economically unwise to go through sophisticated recycle procedure for repeated use instead of simply producing a large quantity of them as disposable additions.

At the end of the interview, Doc. Zhao shared her thoughts on more suitable application for our system. Obviously, our target enzyme should be the ones that are hard to produce but highly valuable. This would make the choice of recycle with our system preferable than producing in quantity with a high cost. With these guidelines, we selected PETase, which can hydrolyze PET in low temperature.

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