Difference between revisions of "Team:XMU-China/Parts"

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{{XMU-China}}
 
 
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<title>2017.igem.org/Team:XMU-China/Parts</title>
  
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<body style="background-color:#FFFFFF;" background="https://static.igem.org/mediawiki/2017/c/cb/T--XMU-China--homebackground.png";>
  
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<ul class="menu">
  
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<li class="dropdown" id="Home">
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<a href="https://2017.igem.org/Team:XMU-China"><img src="https://static.igem.org/mediawiki/2017/9/9a/T--XMU-China--iconhome.png"></a></li>
  
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<div class="column full_size">
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<li class="dropdown" id="Project">
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<a>PROJECT</a>
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<ul style="dropdown-menu">
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<li><a href="https://2017.igem.org/Team:XMU-China/Description">Description</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Design">Design</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Demonstrate">Demonstrate</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Results">Results</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Applied_Design">Applied&nbsp;Design</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Parts">Parts</a></li>
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</ul>
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</li>
  
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<h1>Parts</h1>
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<li class="dropdown" id="Notebook">
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<a>NOTEBOOK</a>
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<ul style="dropdown-menu">
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<li><a href="https://2017.igem.org/Team:XMU-China/Notebook">Notebook</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Experiments">Experiments</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Engineering">Engineering</a></li>
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</ul>
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</li>
  
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<p>Each team will make new parts during iGEM and will submit them to the Registry of Standard Biological Parts. The iGEM software provides an easy way to present the parts your team has created. The <code>&lt;groupparts&gt;</code> tag (see below) will generate a table with all of the parts that your team adds to your team sandbox.</p>
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<li class="dropdown" id="Hardware">
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<p>Remember that the goal of proper part documentation is to describe and define a part, so that it can be used without needing to refer to the primary literature. Registry users in future years should be able to read your documentation and be able to use the part successfully. Also, you should provide proper references to acknowledge previous authors and to provide for users who wish to know more.</p>
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<a>HARDWARE</a>
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<ul style="dropdown-menu">
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<li><a href="https://2017.igem.org/Team:XMU-China/Hardware">Overview</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Freeze-Dry">Freeze-Dry</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/East-Wind">East-Wind</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Accessories">Accessories</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/More_Chips">More&nbsp;Chips</a></li>
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</ul>
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</li>
  
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<li class="dropdown" id="Model">
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<a>MODEL</a>
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<ul style="dropdown-menu">
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<li><a href="https://2017.igem.org/Team:XMU-China/Model">Overview</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Modeling">Modeling</a></li>
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</ul>
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</li>
  
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<li class="dropdown" id="HP">
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<a>HUMAN&nbsp;PRACTICES</a>
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<ul style="dropdown-menu">
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<li><a href="https://2017.igem.org/Team:XMU-China/Human_Practices">Overview</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/HP/Silver">Silver</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/HP/Gold_Integrated">Gold</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Engagement">Engagement</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Entrepreneurship">Entrepreneurship</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Collaborations">Collaborations</a></li>
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</ul>
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</li>
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<li class="dropdown" id="other">
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<a>OTHER&nbsp;WORK</a>
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<ul style="dropdown-menu">
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<li><a href="https://2017.igem.org/Team:XMU-China/InterLab">Interlab</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Contribution">Contribution</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Improve">Improve</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Measurement">Measurement</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Safety">Safety</a></li>
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</ul>
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</li>
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<li class="dropdown" id="Team">
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<a>TEAM</a>
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<ul style="dropdown-menu">
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<li><a href="https://2017.igem.org/Team:XMU-China/Team">Team</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Attributions">Attributions</a></li>
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<li><a href="https://2017.igem.org/Team:XMU-China/Judging">Judging</a></li>
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</ul>
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</li> 
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</ul>
 
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<div class="menu-list"><a href="#subtitle1">Basic Parts</a></div>
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<div class="menu-list"><a href="#subtitle2">Composite Parts</a></div>
  
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</div></div>
  
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<h5>Note</h5>
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function(){
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<p>Note that parts must be documented on the <a href="http://parts.igem.org/Main_Page"> Registry</a>. This page serves to <i>showcase</i> the parts you have made. Future teams and other users and are much more likely to find parts by looking in the Registry than by looking at your team wiki.</p>
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<br />
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<p>This year we have designed more than 20 parts, including 4 basic parts. All of the parts are designed ourselves and most of them have been tested to insure their reliability. To see their specific function, you can click <a href="https://2017.igem.org/Team:XMU-China/Description">here</a> to learn about our project, or browse the specific page on <a href="http://parts.igem.org/Main_Page">parts.igem.org</a> by clicking on the part numbers.</p><br />
 +
<span class="subtitle" id="subtitle1"></span>
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<span class="subtitle" >----------* Basic Parts *----------</span>
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<p>This year we have designed four basic parts. <a href="http://parts.igem.org/Part:BBa_K2310100">BBa_K2310100</a> is our favorite basic part, which is obtained from X. luminescens and encodes LuxAB, emitting luciferase. Besides, we designed other basic parts to construct our detecting system.</p><br />
  
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<div class="table-responsive">
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<table style="color:#666;font-size:16px">
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<thead>
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<tr>
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<th>Favorite</th>
 +
<th>Name</th>
 +
<th>Description</th>
 +
<th>Type</th>
 +
<th>length</th>
 +
<th>Designer</th>
 +
</tr>
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</thead>
  
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<div class="column half_size">
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<tbody>
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<tr>
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<td>√</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310100">BBa_K2310100</a></td>
 +
<td>LuxAB, emitting luciferase (from X. luminescens)</td>
 +
<td>Translational_Unit</td>
 +
<td>2107bp</td>
 +
<td>Xuejie Zhang</td>
 +
</tr>  
  
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<h5>Adding parts to the registry</h5>
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<tr>  
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<p>You can add parts to the Registry at our <a href="http://parts.igem.org/Add_a_Part_to_the_Registry">Add a Part to the Registry</a> link.</p>
+
<td>&#160;</td>  
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<p>We encourage teams to start completing documentation for their parts on the Registry as soon as you have it available. The sooner you put up your parts, the better you will remember all the details about your parts. Remember, you don't need to send us the DNA sample before you create an entry for a part on the Registry. (However, you <b>do</b> need to send us the DNA sample before the Jamboree. If you don't send us a DNA sample of a part, that part will not be eligible for awards and medal criteria.)</p>
+
<td><a href="http://parts.igem.org/Part:BBa_K2310900">BBa_K2310900</a></td>
 +
<td>Formaldehyde dismutase coding sequence</td>
 +
<td>Coding</td>
 +
<td>1200bp</td>
 +
<td>Huiting Lin</td>
 +
</tr>
 +
 
 +
<tr>
 +
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310998">BBa_K2310998</a></td>
 +
<td>Metal Binding Protein</td>  
 +
<td>Coding</td>
 +
<td>186bp</td>
 +
<td>Ruiqi Chen</td>
 +
</tr>
 +
 
 +
<tr>
 +
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310998">BBa_K2310999</a></td>
 +
<td>Lead Binding Protein</td>
 +
<td>Coding</td>
 +
<td>399bp</td>
 +
<td>Ruiqi Chen</td>
 +
</tr>
 +
 
 +
</tbody>
 +
</table>
 
</div>
 
</div>
 +
<span class="blank" id="subtitle2"></span>
 +
<span class="subtitle">----------* Composite Parts *----------</span>
 +
<p>We have designed a series of composite parts this year, and most of them could be useful tools for constructing other devices or systems. There are also some new devices such as <a href="http://parts.igem.org/Part:BBa_K2310106">BBa_K2310106</a>, <a href="http://parts.igem.org/Part:BBa_K2310107">BBa_K2310107</a>, <a href="http://parts.igem.org/Part:BBa_K2310108">BBa_K2310108</a>.</p><br />
  
 +
<div class="table-responsive">
 +
<table style="color:#666;font-size:16px">
 +
<thead>
 +
<tr>
 +
<th>Favorite</th>
 +
<th>Name</th>
 +
<th>Type</th>
 +
<th>Description</th>
 +
<th>Length</th>
 +
<th>Designer</th>
 +
</tr>
 +
</thead>
  
 +
<tbody>
 +
<tr>
 +
<td>√</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310000">BBa_K2310000</a></td>
 +
<td>Bio-signal amplifier based on T7 system</td>
 +
<td>Composite</td>
 +
<td>2820bp</td>
 +
<td>Ruiqi Chen</td>
 +
</tr>
  
 +
<tr>
 +
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310002">BBa_K2310002</a></td>
 +
<td>GFP generator with T7 promoter</td>
 +
<td>Generator</td>
 +
<td>903bp</td>
 +
<td>Mengke Li</td>
 +
</tr>
  
 +
<tr>
 +
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310003">BBa_K2310003</a></td>
 +
<td>LacZ-alpha generator with T7 promoter</td>
 +
<td>Generator</td>
 +
<td>417bp</td>
 +
<td>Mengke Li</td>
 +
</tr>
  
−
<div class="column half_size">
+
<tr>
 +
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310004">BBa_K2310004</a></td>
 +
<td>Double-repoter (LacZ-alpha and RFP) generator with T7 promoter</td>
 +
<td>Generator</td>
 +
<td>1149bp</td>
 +
<td>Yulong Han</td>
 +
</tr>  
  
−
<h5>What information do I need to start putting my parts on the Registry?</h5>
+
<tr>
−
<p>The information needed to initially create a part on the Registry is:</p>
+
<td>&#160;</td>
−
<ul>
+
<td><a href="http://parts.igem.org/Part:BBa_K2310005">BBa_K2310005</a></td>  
−
<li>Part Name</li>
+
<td>T7 RNA polymerase with terminator</td>  
−
<li>Part type</li>
+
<td>Composite</td>  
−
<li>Creator</li>
+
<td>2792bp</td>  
−
<li>Sequence</li>
+
<td>Huiting Lin</td>
−
<li>Short Description (60 characters on what the DNA does)</li>
+
</tr>  
−
<li>Long Description (Longer description of what the DNA does)</li>
+
−
<li>Design considerations</li>
+
−
</ul>
+
  
−
<p>
+
<tr>
−
We encourage you to put up <em>much more</em> information as you gather it over the summer. If you have images, plots, characterization data and other information, please also put it up on the part page. </p>
+
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310006">BBa_K2310006</a></td>
 +
<td>T7 RNA polymerase with weak RBS</td>
 +
<td>Translational Unit</td>
 +
<td>2675bp</td>
 +
<td>Ke Wang</td>
 +
</tr>  
  
−
</div>
+
<tr>
 +
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310007">BBa_K2310007</a></td>
 +
<td>T7 RNA polymerase with weak RBS and terminator</td>
 +
<td>Generator</td>
 +
<td>2812bp</td>
 +
<td>Ke Wang</td>
 +
</tr>  
  
 +
<tr>
 +
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310008">BBa_K2310008</a></td>
 +
<td>T7 RNA polymerase with strong RBS and terminator</td>
 +
<td>Generator</td>
 +
<td>2810bp</td>
 +
<td>Xiao Hu</td>
 +
</tr>
  
−
<div class="column half_size">
+
<tr>
 +
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310009">BBa_K2310009</a></td>
 +
<td>T7 RNA polymerase generator with arsenic promoter</td>
 +
<td>Generator</td>
 +
<td>3338bp</td>
 +
<td>Huiting Lin</td>
 +
</tr>  
  
−
<h5>Inspiration</h5>
+
<tr>
−
<p>We have a created  a <a href="http://parts.igem.org/Well_Documented_Parts">collection of well documented parts</a> that can help you get started.</p>
+
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310011">BBa_K2310011</a></td>
 +
<td>GFP generator with arsenic promoter</td>
 +
<td>Generator</td>
 +
<td>1401bp</td>
 +
<td>Xiao Hu</td>
 +
</tr>  
  
−
<p> You can also take a look at how other teams have documented their parts in their wiki:</p>
+
<tr>
−
<ul>
+
<td>&#160;</td>
−
<li><a href="https://2014.igem.org/Team:MIT/Parts"> 2014 MIT </a></li>
+
<td><a href="http://parts.igem.org/Part:BBa_K2310012">BBa_K2310012</a></td>  
−
<li><a href="https://2014.igem.org/Team:Heidelberg/Parts"> 2014 Heidelberg</a></li>
+
<td>GFP with arsenic promoter</td>  
−
<li><a href="https://2014.igem.org/Team:Tokyo_Tech/Parts">2014 Tokyo Tech</a></li>
+
<td>Generator</td>  
−
</ul>
+
<td>1244bp</td>  
−
</div>
+
<td>Ke Wang</td>
 +
</tr>  
  
−
<div class="column full_size">
+
<tr>
−
<h5>Part Table </h5>
+
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310101">BBa_K2310101</a></td>  
 +
<td>LuxAB generator</td>
 +
<td>Generator</td>
 +
<td>2150bp</td>
 +
<td>Xuejie Zhang</td>
 +
</tr>  
  
−
<p>Please include a table of all the parts your team has made during your project on this page. Remember part characterization and measurement data must go on your team part pages on the Registry. </p>
+
<tr>
 +
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310102">BBa_K2310102</a></td>
 +
<td>LuxAB generator controlled by arsenic</td>
 +
<td>Generator</td>
 +
<td>2633bp</td>
 +
<td>Zhongyao Zhang</td>
 +
</tr>  
  
−
<div class="highlight">
+
<tr>
 +
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310103">BBa_K2310103</a></td>
 +
<td>LuxAB with T7 promoter</td>
 +
<td>Generator</td>
 +
<td>2135bp</td>
 +
<td>Xuejie Zhang</td>
 +
</tr>  
  
 +
<tr>
 +
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310104">BBa_K2310104</a></td>
 +
<td>RFP with T7 promoter</td>
 +
<td>Generator</td>
 +
<td>889bp</td>
 +
<td>Wei Yang</td>
 +
</tr>
  
−
</html>
+
<tr>
−
<groupparts>iGEM17 XMU-China</groupparts>
+
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310105">BBa_K2310105</a></td>
 +
<td>T7 RNA polymerase generator</td>
 +
<td>Generator</td>
 +
<td>2853bp</td>
 +
<td>Xinyue Ding</td>
 +
</tr>  
  
−
<html>
+
<tr>
 +
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310106">BBa_K2310106</a></td>
 +
<td>Arsenic Detecting Device test device</td>
 +
<td>Device</td>
 +
<td>5494bp</td>
 +
<td>Xuejie Zhang</td>
 +
</tr>
 +
 
 +
<tr>
 +
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310107">BBa_K2310107</a></td>
 +
<td>Amplifier test device 1</td>
 +
<td>Device</td>
 +
<td>3750bp</td>
 +
<td>Zhongyao Zhang</td>
 +
</tr>
 +
 
 +
<tr>
 +
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310108">BBa_K2310108</a></td>
 +
<td>Amplifier test device 2</td>
 +
<td>Device</td>
 +
<td>4996bp</td>
 +
<td>Xuejie Zhang</td>
 +
</tr>
 +
 
 +
<tr>
 +
<td>&#160;</td>
 +
<td><a href="http://parts.igem.org/Part:BBa_K2310901">BBa_K2310901</a></td>
 +
<td>T7 RNA polymerase generator controlled by formaldehyde</td>
 +
<td>Generator</td>
 +
<td>3413bp</td>
 +
<td>Yang Liang</td>
 +
</tr>
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<p>Because of the limited time, some of our parts could not been tested, but we still submitted most of the well-designed parts to the Registry.</p>
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<p>Xiamen University, Fujian, China<br />
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No. 422, Siming South Road, Xiamen, Fujian, P. R. China 361005</p>
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Latest revision as of 02:18, 17 November 2017

2017.igem.org/Team:XMU-China/Parts


This year we have designed more than 20 parts, including 4 basic parts. All of the parts are designed ourselves and most of them have been tested to insure their reliability. To see their specific function, you can click here to learn about our project, or browse the specific page on parts.igem.org by clicking on the part numbers.


----------* Basic Parts *----------

This year we have designed four basic parts. BBa_K2310100 is our favorite basic part, which is obtained from X. luminescens and encodes LuxAB, emitting luciferase. Besides, we designed other basic parts to construct our detecting system.


Favorite Name Description Type length Designer
√ BBa_K2310100 LuxAB, emitting luciferase (from X. luminescens) Translational_Unit 2107bp Xuejie Zhang
  BBa_K2310900 Formaldehyde dismutase coding sequence Coding 1200bp Huiting Lin
  BBa_K2310998 Metal Binding Protein Coding 186bp Ruiqi Chen
  BBa_K2310999 Lead Binding Protein Coding 399bp Ruiqi Chen
----------* Composite Parts *----------

We have designed a series of composite parts this year, and most of them could be useful tools for constructing other devices or systems. There are also some new devices such as BBa_K2310106, BBa_K2310107, BBa_K2310108.


Favorite Name Type Description Length Designer
√ BBa_K2310000 Bio-signal amplifier based on T7 system Composite 2820bp Ruiqi Chen
  BBa_K2310002 GFP generator with T7 promoter Generator 903bp Mengke Li
  BBa_K2310003 LacZ-alpha generator with T7 promoter Generator 417bp Mengke Li
  BBa_K2310004 Double-repoter (LacZ-alpha and RFP) generator with T7 promoter Generator 1149bp Yulong Han
  BBa_K2310005 T7 RNA polymerase with terminator Composite 2792bp Huiting Lin
  BBa_K2310006 T7 RNA polymerase with weak RBS Translational Unit 2675bp Ke Wang
  BBa_K2310007 T7 RNA polymerase with weak RBS and terminator Generator 2812bp Ke Wang
  BBa_K2310008 T7 RNA polymerase with strong RBS and terminator Generator 2810bp Xiao Hu
  BBa_K2310009 T7 RNA polymerase generator with arsenic promoter Generator 3338bp Huiting Lin
  BBa_K2310011 GFP generator with arsenic promoter Generator 1401bp Xiao Hu
  BBa_K2310012 GFP with arsenic promoter Generator 1244bp Ke Wang
  BBa_K2310101 LuxAB generator Generator 2150bp Xuejie Zhang
  BBa_K2310102 LuxAB generator controlled by arsenic Generator 2633bp Zhongyao Zhang
  BBa_K2310103 LuxAB with T7 promoter Generator 2135bp Xuejie Zhang
  BBa_K2310104 RFP with T7 promoter Generator 889bp Wei Yang
  BBa_K2310105 T7 RNA polymerase generator Generator 2853bp Xinyue Ding
  BBa_K2310106 Arsenic Detecting Device test device Device 5494bp Xuejie Zhang
  BBa_K2310107 Amplifier test device 1 Device 3750bp Zhongyao Zhang
  BBa_K2310108 Amplifier test device 2 Device 4996bp Xuejie Zhang
  BBa_K2310901 T7 RNA polymerase generator controlled by formaldehyde Generator 3413bp Yang Liang

Because of the limited time, some of our parts could not been tested, but we still submitted most of the well-designed parts to the Registry.