CharisKomos (Talk | contribs) (Created page with "function importScientific(){ $.ajax({ "url": 'https://static.igem.org/mediawiki/2017/2/25/Back.txt', "type": "GET", "dataType": "text", "timeout": 10000, "da...") |
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function importScientific(){ | function importScientific(){ | ||
+ | /* Sub section 1 and General (titles and src) */ | ||
$.ajax({ | $.ajax({ | ||
− | "url": 'https://static.igem.org/mediawiki/2017/ | + | "url": 'https://static.igem.org/mediawiki/2017/0/0c/Greekom_subsection1.txt', |
"type": "GET", | "type": "GET", | ||
"dataType": "text", | "dataType": "text", | ||
Line 8: | Line 9: | ||
"data": {} | "data": {} | ||
}).done(function(data, textStatus, jqxhr) { | }).done(function(data, textStatus, jqxhr) { | ||
− | $('# | + | |
+ | /* General - Execute once */ | ||
+ | $('#label').html('At a glance'); | ||
$('#mode').val('simple'); | $('#mode').val('simple'); | ||
+ | $('#label').css('right', '199px'); | ||
+ | |||
+ | /* Header */ | ||
+ | $('#header').html('Project Description'); | ||
+ | $('#sub_header_1').html('BIO-LOGICAL INFORMATION PROCESSING'); | ||
+ | $('#sub_header_2').html(''); | ||
+ | $('#sub_header_3').html('APPLICATIONS OF BIOLOGICAL COMPUTERS'); | ||
+ | $('#sub_header_4').html('pANDORRA: A BIOLOGICAL COMPUTER TO TREAT CANCER'); | ||
+ | $('#sub_header_5').html('WHY COLORECTAL CANCER?'); | ||
+ | $('#sub_header_6').html('TRANSFERENCE TO CANCER CELLS'); | ||
+ | |||
+ | /* Images */ | ||
+ | $('#image_1').attr({'src' : 'https://static.igem.org/mediawiki/2017/3/36/Greekom_image1.png'}); | ||
+ | $('#image_2').attr({'src' : 'https://static.igem.org/mediawiki/2017/b/b1/Greekom_image2_glance.png'}); | ||
+ | $('#image_3').attr({'src' : 'https://static.igem.org/mediawiki/2017/0/09/Greekom_image3_glance.gif'}); | ||
+ | |||
+ | /* Section 1 */ | ||
+ | $('#sub_section_1').html(data); | ||
+ | |||
console.log('This is from console alone' + data); | console.log('This is from console alone' + data); | ||
}).fail(function(jqxhr, textStatus, errorThrown) { | }).fail(function(jqxhr, textStatus, errorThrown) { | ||
//Write code to be executed when the request FAILS. | //Write code to be executed when the request FAILS. | ||
}); | }); | ||
+ | |||
+ | /* Sub section 2 */ | ||
+ | $.ajax({ | ||
+ | "url": 'https://static.igem.org/mediawiki/2017/1/1a/Greekom_text2.txt', | ||
+ | "type": "GET", | ||
+ | "dataType": "text", | ||
+ | "timeout": 10000, | ||
+ | "data": {} | ||
+ | }).done(function(data, textStatus, jqxhr) { | ||
+ | |||
+ | /* Section */ | ||
+ | $('#sub_section_2').html(data); | ||
+ | |||
+ | }).fail(function(jqxhr, textStatus, errorThrown) { | ||
+ | //Write code to be executed when the request FAILS. | ||
+ | }); | ||
+ | |||
+ | /* Sub section 3 */ | ||
+ | $.ajax({ | ||
+ | "url": 'https://static.igem.org/mediawiki/2017/3/34/Greekom_subsection3_glance.txt', | ||
+ | "type": "GET", | ||
+ | "dataType": "text", | ||
+ | "timeout": 10000, | ||
+ | "data": {} | ||
+ | }).done(function(data, textStatus, jqxhr) { | ||
+ | |||
+ | /* Section */ | ||
+ | $('#sub_section_3').html(data); | ||
+ | |||
+ | }).fail(function(jqxhr, textStatus, errorThrown) { | ||
+ | //Write code to be executed when the request FAILS. | ||
+ | }); | ||
+ | |||
+ | /* Sub section 4 */ | ||
+ | $.ajax({ | ||
+ | "url": 'https://static.igem.org/mediawiki/2017/2/2e/Greekom_text4.txt', | ||
+ | "type": "GET", | ||
+ | "dataType": "text", | ||
+ | "timeout": 10000, | ||
+ | "data": {} | ||
+ | }).done(function(data, textStatus, jqxhr) { | ||
+ | |||
+ | /* Section */ | ||
+ | $('#sub_section_4').html(data); | ||
+ | |||
+ | }).fail(function(jqxhr, textStatus, errorThrown) { | ||
+ | //Write code to be executed when the request FAILS. | ||
+ | }); | ||
+ | |||
+ | /* Sub section 5 */ | ||
+ | $.ajax({ | ||
+ | "url": 'https://static.igem.org/mediawiki/2017/0/06/Greekom_subsection5_glance.txt', | ||
+ | "type": "GET", | ||
+ | "dataType": "text", | ||
+ | "timeout": 10000, | ||
+ | "data": {} | ||
+ | }).done(function(data, textStatus, jqxhr) { | ||
+ | |||
+ | /* Section */ | ||
+ | $('#sub_section_5').html(data); | ||
+ | |||
+ | }).fail(function(jqxhr, textStatus, errorThrown) { | ||
+ | //Write code to be executed when the request FAILS. | ||
+ | }); | ||
+ | |||
+ | /* Sub section 6 */ | ||
+ | $.ajax({ | ||
+ | "url": 'https://static.igem.org/mediawiki/2017/a/a7/Greekom_text6.txt', | ||
+ | "type": "GET", | ||
+ | "dataType": "text", | ||
+ | "timeout": 10000, | ||
+ | "data": {} | ||
+ | }).done(function(data, textStatus, jqxhr) { | ||
+ | |||
+ | /* Section */ | ||
+ | $('#sub_section_6').html(data); | ||
+ | |||
+ | }).fail(function(jqxhr, textStatus, errorThrown) { | ||
+ | //Write code to be executed when the request FAILS. | ||
+ | }); | ||
+ | |||
+ | /* Sub section 7 */ | ||
+ | $.ajax({ | ||
+ | "url": 'https://static.igem.org/mediawiki/2017/0/07/Greekom_subsection7_glance.txt', | ||
+ | "type": "GET", | ||
+ | "dataType": "text", | ||
+ | "timeout": 10000, | ||
+ | "data": {} | ||
+ | }).done(function(data, textStatus, jqxhr) { | ||
+ | |||
+ | /* Section */ | ||
+ | $('#sub_section_7').html(data); | ||
+ | |||
+ | }).fail(function(jqxhr, textStatus, errorThrown) { | ||
+ | //Write code to be executed when the request FAILS. | ||
+ | }); | ||
+ | |||
+ | $('#Description').removeClass('grayscale'); | ||
} | } | ||
function importGeneral(){ | function importGeneral(){ | ||
− | |||
$.ajax({ | $.ajax({ | ||
− | "url": 'https://static.igem.org/mediawiki/2017/ | + | "url": 'https://static.igem.org/mediawiki/2017/1/12/Greekom_text1.txt', |
"type": "GET", | "type": "GET", | ||
"dataType": "text", | "dataType": "text", | ||
Line 26: | Line 145: | ||
"data": {} | "data": {} | ||
}).done(function(data, textStatus, jqxhr) { | }).done(function(data, textStatus, jqxhr) { | ||
− | + | ||
+ | /* General - Execute once */ | ||
$('#mode').val('scientific'); | $('#mode').val('scientific'); | ||
+ | $('#label').html('In depth'); | ||
+ | $('#label').css('right', '210px'); | ||
console.log('This is from console alone' + data); | console.log('This is from console alone' + data); | ||
+ | |||
+ | |||
+ | /* Header */ | ||
+ | $('#header').html('Project Description'); | ||
+ | $('#sub_header_1').html('BIOMOLECULAR COMPUTING'); | ||
+ | $('#sub_header_2').html('APPLICATIONS OF BIOMOLECULAR COMPUTERS'); | ||
+ | $('#sub_header_3').html('pANDORRA: PROGRAMMABLE AND OR RNAi ASSEMBLY'); | ||
+ | $('#sub_header_4').html('COLORECTAL CANCER'); | ||
+ | $('#sub_header_5').html('A HOLISTIC CANCER THERAPY'); | ||
+ | $('#sub_header_6').html(''); | ||
+ | |||
+ | /* Section 1 */ | ||
+ | $('#sub_section_1').html(data); | ||
+ | $('#sub_section_2').html("Being assembled exclusively from biomolecules, these circuits possess two highly advantageous characteristics; being compatible with in vivo applications and "+ "exhibiting the remarkable information processing potential of biological systems which opens up opportunities for a variety of applications."+ | ||
+ | "<ul><li style='list-style:none'>1. Creation of intelligent diagnostic systems capable of molecular profiling a disease state and subsequent emission of a detectable signal. [3]</li>"+ | ||
+ | "<li style='list-style:none'>2. Creation of intelligent therapeutic systems capable of selective actuation upon a predetermined molecular profile. [3]</li>"+ | ||
+ | "<li style='list-style:none'>3. Creation of biomolecular high-throughput assays for RNA profiling. [4]</li>"+ | ||
+ | "<li style='list-style:none'>4. Application of highly parallel and energy efficient computing for computationally complex problems. [5]</li>"+ | ||
+ | "<li style='list-style:none'>5. Information storage and retrieval. [6]</li></ul>And many more yet to be imagined..."); | ||
+ | |||
+ | $('#sub_section_3').html("MicroRNAs (miRNAs) constitute ideal building blocks for biochemical logic circuits as they inherently implement a NOR gate upon the gene they regulate. [7] In fact,"+" any logic formula can be computed by miRNAs acting upon multiple transcriptional and post-transcriptional regulators and synthetic miRNAs encoded by them. [2] Therefore, we focused our "+"efforts on developing a toolbox of highly modular and interchangeable parts, sufficient to assemble a plethora of customizable, multi-leveled circuits, enabling easy manipulations of miRNA inputs "+"as well as circuit topologies to accommodate a less arduous application of classifying circuits by prospective iGEM teams and the entire SynBio community. We applied our engineered circuit in our "+"cell line of interest, Caco-2, to actuate selective protein expression upon integration of multiple miRNA inputs, elicited from our model as quintessential to optimize our circuit’s classifying "+"ability, demonstrating the feasibility of approaching colorectal cancer therapeutics with molecular-profiling-based expression systems of proteins of therapeutic potential."); | ||
+ | |||
+ | $('#sub_section_4').html("Colorectal cancer (CRC) is the second most common cause of cancer-related deaths in the US. [8] CRC's lifetime prevalence equals 4.7% and 4.4% for men and women "+ "respectively, whereas the 5- and 10-year survival rate is 65% and 58% respectively. An array of novel methods and approaches have been described over the last years based on our increasing "+ "knowledge of the molecular events that contribute to carcinogenesis and tumor proliferation, however the go-to method for CRC's treatment remains surgical excision along with chemotherapy (adjuvant "+"or neoadjuvant) and radiation therapy. [9] The aforementioned therapeutic approaches suffer from one or more of the following: nonspecific targeting of cancer cells, insufficient penetration to "+"the target tissue and inadequate cytotoxicity, all of which are associated with increased mortality and decreased quality of life. [10]"); | ||
+ | |||
+ | console.log('This is from console alone' + data); | ||
+ | |||
+ | $('#sub_section_5').html("Towards our vision of an RNAi-based logic circuit application to cancer treatment, inspired by the bottom-up philosophy of synthetic biology, we could not help but "+"envision what characteristics the ideal cancer treatment should entail. Our notion essentially described a controllable agent to transfer the classifier plasmids, providing selective targeting, "+"enhanced motility and therefore penetration to tissues of interest as well as responsiveness to external stimuli operating as control signals. Bacteria are surprisingly well suited to perform "+"this transference, due to their inherent propensity to favor colonization of tumorous tissue owing to the advantageous growth conditions that cancer microenvironment exhibits as well as the fact "+"that they naturally possess biological mechanisms which can be exploited by means of synthetic biology to perform the aforementioned functions. [10] We engineered a strain of E. coli capable of "+"selective binding to colorectal cancer cells and expressing invasion machinery under the control of a quorum sensing system so as to achieve cell density-dependent invasion, associated with "+"tumorous microenvironment."); | ||
+ | |||
+ | $('#sub_section_6').html(''); | ||
+ | $('#sub_section_7').html(''); | ||
}).fail(function(jqxhr, textStatus, errorThrown) { | }).fail(function(jqxhr, textStatus, errorThrown) { | ||
//Write code to be executed when the request FAILS. | //Write code to be executed when the request FAILS. | ||
}); | }); | ||
+ | |||
+ | |||
+ | $('#Description').addClass('grayscale'); | ||
+ | $('#display_box').css('height','4650px'); | ||
} | } |
Latest revision as of 03:57, 16 December 2017
function importScientific(){
/* Sub section 1 and General (titles and src) */
$.ajax({ "url": 'https://static.igem.org/mediawiki/2017/0/0c/Greekom_subsection1.txt', "type": "GET", "dataType": "text", "timeout": 10000, "data": {}
}).done(function(data, textStatus, jqxhr) {
/* General - Execute once */
$('#label').html('At a glance'); $('#mode').val('simple'); $('#label').css('right', '199px');
/* Header */
$('#header').html('Project Description'); $('#sub_header_1').html('BIO-LOGICAL INFORMATION PROCESSING'); $('#sub_header_2').html(); $('#sub_header_3').html('APPLICATIONS OF BIOLOGICAL COMPUTERS'); $('#sub_header_4').html('pANDORRA: A BIOLOGICAL COMPUTER TO TREAT CANCER'); $('#sub_header_5').html('WHY COLORECTAL CANCER?'); $('#sub_header_6').html('TRANSFERENCE TO CANCER CELLS');
/* Images */ $('#image_1').attr({'src' : 'https://static.igem.org/mediawiki/2017/3/36/Greekom_image1.png'}); $('#image_2').attr({'src' : 'https://static.igem.org/mediawiki/2017/b/b1/Greekom_image2_glance.png'}); $('#image_3').attr({'src' : 'https://static.igem.org/mediawiki/2017/0/09/Greekom_image3_glance.gif'});
/* Section 1 */
$('#sub_section_1').html(data);
console.log('This is from console alone' + data);
}).fail(function(jqxhr, textStatus, errorThrown) {
//Write code to be executed when the request FAILS.
});
/* Sub section 2 */
$.ajax({ "url": 'https://static.igem.org/mediawiki/2017/1/1a/Greekom_text2.txt', "type": "GET", "dataType": "text", "timeout": 10000, "data": {}
}).done(function(data, textStatus, jqxhr) {
/* Section */
$('#sub_section_2').html(data);
}).fail(function(jqxhr, textStatus, errorThrown) {
//Write code to be executed when the request FAILS.
});
/* Sub section 3 */
$.ajax({ "url": 'https://static.igem.org/mediawiki/2017/3/34/Greekom_subsection3_glance.txt', "type": "GET", "dataType": "text", "timeout": 10000, "data": {}
}).done(function(data, textStatus, jqxhr) {
/* Section */
$('#sub_section_3').html(data);
}).fail(function(jqxhr, textStatus, errorThrown) {
//Write code to be executed when the request FAILS.
});
/* Sub section 4 */
$.ajax({ "url": 'https://static.igem.org/mediawiki/2017/2/2e/Greekom_text4.txt', "type": "GET", "dataType": "text", "timeout": 10000, "data": {}
}).done(function(data, textStatus, jqxhr) {
/* Section */
$('#sub_section_4').html(data);
}).fail(function(jqxhr, textStatus, errorThrown) {
//Write code to be executed when the request FAILS.
});
/* Sub section 5 */
$.ajax({ "url": 'https://static.igem.org/mediawiki/2017/0/06/Greekom_subsection5_glance.txt', "type": "GET", "dataType": "text", "timeout": 10000, "data": {}
}).done(function(data, textStatus, jqxhr) {
/* Section */
$('#sub_section_5').html(data);
}).fail(function(jqxhr, textStatus, errorThrown) {
//Write code to be executed when the request FAILS.
});
/* Sub section 6 */
$.ajax({ "url": 'https://static.igem.org/mediawiki/2017/a/a7/Greekom_text6.txt', "type": "GET", "dataType": "text", "timeout": 10000, "data": {}
}).done(function(data, textStatus, jqxhr) {
/* Section */
$('#sub_section_6').html(data);
}).fail(function(jqxhr, textStatus, errorThrown) {
//Write code to be executed when the request FAILS.
});
/* Sub section 7 */
$.ajax({ "url": 'https://static.igem.org/mediawiki/2017/0/07/Greekom_subsection7_glance.txt', "type": "GET", "dataType": "text", "timeout": 10000, "data": {}
}).done(function(data, textStatus, jqxhr) {
/* Section */
$('#sub_section_7').html(data);
}).fail(function(jqxhr, textStatus, errorThrown) {
//Write code to be executed when the request FAILS.
});
$('#Description').removeClass('grayscale');
}
function importGeneral(){
$.ajax({ "url": 'https://static.igem.org/mediawiki/2017/1/12/Greekom_text1.txt', "type": "GET", "dataType": "text", "timeout": 10000, "data": {}
}).done(function(data, textStatus, jqxhr) {
/* General - Execute once */
$('#mode').val('scientific'); $('#label').html('In depth'); $('#label').css('right', '210px'); console.log('This is from console alone' + data);
/* Header */
$('#header').html('Project Description'); $('#sub_header_1').html('BIOMOLECULAR COMPUTING'); $('#sub_header_2').html('APPLICATIONS OF BIOMOLECULAR COMPUTERS'); $('#sub_header_3').html('pANDORRA: PROGRAMMABLE AND OR RNAi ASSEMBLY'); $('#sub_header_4').html('COLORECTAL CANCER'); $('#sub_header_5').html('A HOLISTIC CANCER THERAPY'); $('#sub_header_6').html();
/* Section 1 */
$('#sub_section_1').html(data); $('#sub_section_2').html("Being assembled exclusively from biomolecules, these circuits possess two highly advantageous characteristics; being compatible with in vivo applications and "+ "exhibiting the remarkable information processing potential of biological systems which opens up opportunities for a variety of applications."+"
- 1. Creation of intelligent diagnostic systems capable of molecular profiling a disease state and subsequent emission of a detectable signal. [3] "+ "
- 2. Creation of intelligent therapeutic systems capable of selective actuation upon a predetermined molecular profile. [3] "+ "
- 3. Creation of biomolecular high-throughput assays for RNA profiling. [4] "+ "
- 4. Application of highly parallel and energy efficient computing for computationally complex problems. [5] "+ "
- 5. Information storage and retrieval. [6]
$('#sub_section_3').html("MicroRNAs (miRNAs) constitute ideal building blocks for biochemical logic circuits as they inherently implement a NOR gate upon the gene they regulate. [7] In fact,"+" any logic formula can be computed by miRNAs acting upon multiple transcriptional and post-transcriptional regulators and synthetic miRNAs encoded by them. [2] Therefore, we focused our "+"efforts on developing a toolbox of highly modular and interchangeable parts, sufficient to assemble a plethora of customizable, multi-leveled circuits, enabling easy manipulations of miRNA inputs "+"as well as circuit topologies to accommodate a less arduous application of classifying circuits by prospective iGEM teams and the entire SynBio community. We applied our engineered circuit in our "+"cell line of interest, Caco-2, to actuate selective protein expression upon integration of multiple miRNA inputs, elicited from our model as quintessential to optimize our circuit’s classifying "+"ability, demonstrating the feasibility of approaching colorectal cancer therapeutics with molecular-profiling-based expression systems of proteins of therapeutic potential.");
$('#sub_section_4').html("Colorectal cancer (CRC) is the second most common cause of cancer-related deaths in the US. [8] CRC's lifetime prevalence equals 4.7% and 4.4% for men and women "+ "respectively, whereas the 5- and 10-year survival rate is 65% and 58% respectively. An array of novel methods and approaches have been described over the last years based on our increasing "+ "knowledge of the molecular events that contribute to carcinogenesis and tumor proliferation, however the go-to method for CRC's treatment remains surgical excision along with chemotherapy (adjuvant "+"or neoadjuvant) and radiation therapy. [9] The aforementioned therapeutic approaches suffer from one or more of the following: nonspecific targeting of cancer cells, insufficient penetration to "+"the target tissue and inadequate cytotoxicity, all of which are associated with increased mortality and decreased quality of life. [10]");
console.log('This is from console alone' + data);
$('#sub_section_5').html("Towards our vision of an RNAi-based logic circuit application to cancer treatment, inspired by the bottom-up philosophy of synthetic biology, we could not help but "+"envision what characteristics the ideal cancer treatment should entail. Our notion essentially described a controllable agent to transfer the classifier plasmids, providing selective targeting, "+"enhanced motility and therefore penetration to tissues of interest as well as responsiveness to external stimuli operating as control signals. Bacteria are surprisingly well suited to perform "+"this transference, due to their inherent propensity to favor colonization of tumorous tissue owing to the advantageous growth conditions that cancer microenvironment exhibits as well as the fact "+"that they naturally possess biological mechanisms which can be exploited by means of synthetic biology to perform the aforementioned functions. [10] We engineered a strain of E. coli capable of "+"selective binding to colorectal cancer cells and expressing invasion machinery under the control of a quorum sensing system so as to achieve cell density-dependent invasion, associated with "+"tumorous microenvironment.");
$('#sub_section_6').html(); $('#sub_section_7').html();
}).fail(function(jqxhr, textStatus, errorThrown) {
//Write code to be executed when the request FAILS.
});
$('#Description').addClass('grayscale');
$('#display_box').css('height','4650px');
}