Difference between revisions of "Team:Aix-Marseille/Parts"

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{{Aix-Marseille|title=Parts|toc=__TOC__}}
 
{{Aix-Marseille|title=Parts|toc=__TOC__}}
  
==Basic Parts==
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During the summer, several basic parts were constructed. Some of them are not construct in [http://parts.igem.org/Help:Standards/Assembly/RFC10 Rfc10] assembly standard, but in [http://parts.igem.org/Assembly_standard_25 Rfc25], which help to create fusion protein.
 
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During the summer, several basic parts were constructed. Some of them are not construct in Rfc10 assembly standard, but in [http://parts.igem.org/Assembly_standard_25 Rfc25], which help to create fusion protein.
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'''We create basic part for any of our approach : '''
 
'''We create basic part for any of our approach : '''

Revision as of 12:13, 5 October 2017

Parts

During the summer, several basic parts were constructed. Some of them are not construct in [http://parts.igem.org/Help:Standards/Assembly/RFC10 Rfc10] assembly standard, but in [http://parts.igem.org/Assembly_standard_25 Rfc25], which help to create fusion protein.

We create basic part for any of our approach :

  • Xylella fastidiosa constitutive promoter + strong RBS (Rfc10) - [http://parts.igem.org/Part:BBa_K2255004 BBa_K2255004]
  • Multi-Tag (Rfc25) - [http://parts.igem.org/Part:BBa_K2255003 BBa_K2255003]

We design 3 parts for the quorum sensing approach :

  • Enoyl-CoA hydratase (Rfc10) - [http://parts.igem.org/Part:BBa_K2255000 BBa_K2255000]
  • Acyl-CoA isomerase (Rfc10) - [http://parts.igem.org/Part:BBa_K2255001 BBa_K2255001]
  • Thioesterase (Rfc10) - [http://parts.igem.org/Part:BBa_K2255002 BBa_K2255002]

We design a part for the disruption of the biofilm :

  • EPS-Depolymerase (Rfc25) - [http://parts.igem.org/Part:BBa_K2255006 BBa_K2255006]

Finally, we design some basic part for the phage-like particle approach :

  • Domain 3 of p3 from M13 (Rfc25) - [http://parts.igem.org/Part:BBa_K2255005 BBa_K2255005]
  • Signal sequence of p3 from M13 (Rfc25) - [http://parts.igem.org/Part:BBa_K2255007 BBa_K2255007]

The collection part use for the creation of phage-like particle, those part correspond to the domaine 1 (D1) and 2 (D2) of the p3 protein. They allow the phage-like particle to target the specific bacterium. To test the specificity of our phage-like particle and to target other pathogenic bacterium, we design a large scale of attachment protein :

  • p3_E.coli (Rfc25) - [http://parts.igem.org/Part:BBa_K2255008 BBa_K2255008]
  • p3_ N.gonorrhoeae (Rfc25) - [http://parts.igem.org/Part:BBa_K2255009 BBa_K2255009]
  • p3_P.aeruginosa (Rfc25) - [http://parts.igem.org/Part:BBa_K2255010 BBa_K2255010]
  • p3_R.solanacearum_RSM1 (Rfc25) - [http://parts.igem.org/Part:BBa_K2255011 BBa_K2255011]
  • p3_R.solanacearum_RSS1 (Rfc25) - [http://parts.igem.org/Part:BBa_K2255012 BBa_K2255012]
  • p3_V.Cholerae_CTXΦ (Rfc25) - [http://parts.igem.org/Part:BBa_K2255013 BBa_K2255013]
  • p3_V.Cholerae_fs2 (Rfc25) - [http://parts.igem.org/Part:BBa_K2255014 BBa_K2255014]
  • p3_V.Cholerea_VGJΦ (Rfc25) - [http://parts.igem.org/Part:BBa_K2255015 BBa_K2255015]
  • p3_X.campestris (Rfc25) - [http://parts.igem.org/Part:BBa_K2255016 BBa_K2255016]
  • p3_X.fastidiosa (Rfc25) - [http://parts.igem.org/Part:BBa_K2255017 BBa_K2255017]
  • p3_X.fuscans (Rfc25) - [http://parts.igem.org/Part:BBa_K2255018 BBa_K2255018]