Difference between revisions of "Team:Cadets2Vets/Design"

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<head><meta name="viewport" content="width=device-width, initial-scale=1"><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><script>function disputeIframe(){setTimeout(function (){self.document.open();self.document.write("<h1><a style='font-weight: normal; color: #000; font-family: arial;' href='" + self.location.href + "' target='_top'>Iframes are not supported on a free plan.</a></h1>");                    self.document.close();},200);} try {if (self!=top){disputeIframe();}}catch(e){disputeIframe();}</script><link href="//d33rxv6e3thba6.cloudfront.net/asset/sites/css/bootstrap3.min.css" rel="stylesheet"><link rel="stylesheet" href="//d33rxv6e3thba6.cloudfront.net/asset/sites/css/font-awesome.min4.css"><link href="//d33rxv6e3thba6.cloudfront.net/asset/sites/css/hover-min.css" rel="stylesheet"><link href="/static/css/style.css?v=2.0.4" rel="stylesheet"><link href="/static/css/blocks.css?v=2.0.4" rel="stylesheet"><link href="/static/css/theme-css/ez.css?v=2.0.4" rel="stylesheet"><style  type='text/css' data='Page Custom CSS'></style><script src="//code.jquery.com/jquery-1.12.4.min.js" integrity="sha256-ZosEbRLbNQzLpnKIkEdrPv7lOy9C27hHQ+Xp8a4MxAQ=" crossorigin="anonymous"></script><script> if (!window.jQuery) {  document.write('<script src="//d33rxv6e3thba6.cloudfront.net/asset/sites/js/jquery.js"></scr' + 'ipt>'); }</script><meta name="page-source" site="//sites.simbla.com/52b5a023-1bcf-d512-a412-3351ef830f04" page="design" site-id="593aca5737cad4ed7fa1fc16" page-id="59416e8195f86d9166bcfe25" master-page-id="" /><link rel="canonical" href="//sites.simbla.com/52b5a023-1bcf-d512-a412-3351ef830f04/design" /></head><body data-spy="scroll" data-target=".navbar-collapse" class="static-page"><div id="windowDiv"><div id="MarginsTop" style="height: 0px;" class="row"></div><div id="bodyContainer" style="width:100%"><div class="simblaEL simblaBlock headerBlock containerHolder" data-drag="P0" id="P0" style="position: relative;"><a class="simblaEL anchorElm" data-drag="divCounter" name="Intro0" id="Intro0"></a><div class="container" style="width: 100%; padding: 0px;"><header class="simblaEL container-fluid" data-drag="P2" id="P2"><div class="row simblaEL rDivider" data-drag="P4" id="P4" style="position: relative;"><div class="sDivider col-md-2 index0" data-colsize="2"></div><div class="sDivider col-md-10 index1" data-colsize="10"></div></div></header></div></div><div class="simblaEL containerHolder" data-drag="P0" id="P0" style=""><a class="simblaEL anchorElm" data-drag="divCounter" name="Intro0" id="Intro0"></a><div class="container-fluid minHeight60 active" data-border-type="All" style="overflow: hidden; min-height: 416.4px; border-radius: 0px; background-image: url(&quot;//d33rxv6e3thba6.cloudfront.net/2015/10/5648949c3a571f390c74a1cb/3153-1yh8305.png&quot;); background-attachment: initial; background-color: initial; background-size: initial; background-origin: initial; background-clip: initial; background-position: initial; background-repeat: repeat;"><div class="simblaEL containerHolder" data-drag="P10" id="P10" style="position: relative;"><div class="container" style=""><div class="row simblaEL rDivider" data-drag="P12" id="P12" style="position: relative; padding-top: 30px;"><div class="sDivider col-md-6 index0" data-colsize="6"><div class="simblaEL tcH" data-drag="P14" id="P14" style="position: relative;"><div class="textContainer H1" style="cursor: text; padding-top: 80px;"><h1>Design</h1></div></div><div class="simblaEL tcH" data-drag="P16" id="P16"><div class="textContainer H2" style="cursor: text;"><h2><div style="text-align: left;">The foundation of our circuit</div></h2></div></div><div class="simblaEL tcH" data-drag="P18" id="P18" style="position: relative;"><div class="textContainer H3" style="cursor: text; padding-bottom: 30px; padding-right: 20px;"><h3><font style="font-size: 24px;" color="#444444">
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Our circuit was designed to utilize specific parts so that when the E-coli cells containing this gene circuit are exposed to arsenic, the Green Florescent Protein (GFP) is produced making the ticket glow under a blue light.&nbsp;</font><div><br></div></h3></div></div></div><div class="sDivider col-md-6 index1" data-colsize="6"><div class="simblaEL simblaImg" data-drag="P20" id="P20"><img draggable="false" class="" alt="" data-id="" title="" src="https://s3.amazonaws.com/simbla-static/2017/5/593aca5737cad4ed7fa1fc16/12707-ymd99p.jpg"></div></div></div></div></div></div></div><div style="position: relative;" id="P21" class="simblaEL  simblaBlock contentBlock content11 containerHolder" data-drag="P21"><a class="simblaEL anchorElm" data-drag="divCounter" name="Content0" id="Content0" data-id="594172e45e8cf097669ba07b"></a><div style="border-radius: 0px; width: 100%; margin-top: 35px;" data-border-type="All" class="container"><div style="position: relative;" class="simblaEL containerHolder" data-drag="P23" id="P23"><div class="container" style="padding: 0px; margin: 0px auto;"><div class="row simblaEL rDivider" data-drag="P25" id="P25" style=""><div class="sDivider col-md-6 index0" data-colsize="6" style=""><div class="row main simblaEL rDivider" data-drag="P27" id="P27" style="padding: 20px 25px 25px; margin-bottom: 25px; border-radius: 4px;" data-border-type="All"><div class="sDivider col-md-2 index0" data-colsize="2" style=""><div class="simblaEL iconElm" data-drag="P29" id="P29" style="padding: 0px; margin-top: 20px; margin-right: 0px; margin-bottom: 0px;"><i class="fa fa-anchor bicon" style="" data-color="#ffffff" data-bgcolor="#2e3144" data-shadow="s5" data-border="circle borderI"></i></div></div><div class="sDivider col-md-10 index1" data-colsize="10"><div class="simblaEL tcH" data-drag="P31" id="P31"><div class="textContainer H2" style="cursor: text;"><h2>PHASE 1</h2></div></div><div class="simblaEL tcH" data-drag="P33" id="P33"></div><div class="simblaEL tcH" data-drag="P35" id="P35"></div><div class="simblaEL tcH" data-drag="P37" id="P37"></div><div class="simblaEL tc" data-drag="P39" id="P39"><div class="textContainer" style="cursor: text; line-height: 24px;"><p style="line-height: 24px;"></p><span style="color: rgb(255, 255, 255); line-height: 24px;"><ul><li><font style="font-size: 24px;">Test efficacy of the circuit in vivo&nbsp;<br></font></li><li><font style="font-size: 24px;">Grow transformed e.coli with plasmid circuit in Arsenic laced media&nbsp;<br></font></li><li><font style="font-size: 24px;">Serial dilution of  arsenic and arsenite  to find the lowest activation amount of the circuit in vivo</font><br></li></ul></span><p style="line-height: 24px;"></p></div></div><div class="simblaEL tc" data-drag="P41" id="P41" style="position: relative;"></div></div></div></div><div class="sDivider col-md-6 index1" data-colsize="6" style=""><div class="row simblaEL main rDivider" data-drag="P43" id="P43" style="padding: 20px 25px 25px; margin-bottom: 25px; position: relative; border-radius: 4px;" data-border-type="All"><div class="sDivider col-md-2 index0" data-colsize="2" style=""><div class="simblaEL iconElm" data-drag="P45" id="P45" style="padding: 0px; margin-top: 20px; margin-right: 0px; margin-bottom: 0px;"><i class="fa fa-cogs bicon" style="" data-color="#ffffff" data-bgcolor="#2e3144" data-shadow="s5" data-border="circle borderI"></i></div></div><div class="sDivider col-md-10 index1" data-colsize="10"><div class="simblaEL tcH" data-drag="P47" id="P47"></div><div class="simblaEL tcH" data-drag="P49" id="P49"></div><div class="simblaEL tcH" data-drag="P51" id="P51"><div class="textContainer H2" style="cursor: text;"><h2>PHASE 2</h2></div></div><div class="simblaEL tc" data-drag="P53" id="P53"><div class="textContainer" style="cursor: text; line-height: 24px;"><p style="line-height: 24px;"></p><ul><li style="color: rgb(255, 255, 255);"><font style="font-size: 24px;" color="#ffffff">Test the efficacy of the plasmid circuit in situ&nbsp;<br></font></li><li style="color: rgb(255, 255, 255);"><font style="font-size: 24px;" color="#ffffff">Perform above experiments with minipreped plasmid circuit&nbsp;<br></font></li><li style="color: rgb(255, 255, 255);"><font style="font-size: 24px;" color="#ffffff">Titrate both circuit and trigger to find optimal mixture&nbsp;<br></font></li><li style="color: rgb(255, 255, 255);"><font style="font-size: 24px;" color="#ffffff">Standardize reactions &nbsp;<br></font></li><li style="color: rgb(255, 255, 255);"><font style="font-size: 24px;" color="#ffffff">Test on paper matrix</font><br></li></ul><p></p></div></div><div class="simblaEL tc" data-drag="P55" id="P55"></div></div></div></div></div><div class="row simblaEL rDivider" data-drag="P57" id="P57" style="padding: 0px; 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line-height: 24px;"><p style="line-height: 24px;"></p><ul><li style="color: rgb(255, 255, 255);"><font style="font-size: 24px;" color="#ffffff">Test efficacy of freeze drying circuit on paper for distribution and storage purposes. &nbsp;</font></li></ul><p></p><p style="line-height: 24px;"><br></p></div></div><div class="simblaEL tc" data-drag="P71" id="P71"></div></div></div></div><div class="sDivider col-md-6 index1" data-colsize="6" data-title="Column"></div></div></div></div></div></div></div></div><a href="https://www.simbla.com" target="_blank" id="linkToSimbla" class="en"><span class="main">SIMBLA</span><span class="s">Website Builder</span></a><script src="//d33rxv6e3thba6.cloudfront.net/asset/sites/js/jquery.bootpag.min.js"></script><script src="//d33rxv6e3thba6.cloudfront.net/asset/sites/js/bootstrap3.min.js"></script><script src="//d33rxv6e3thba6.cloudfront.net/asset/sites/js/Chart.min.js"></script><script src="//d33rxv6e3thba6.cloudfront.net/asset/sites/js/numeral.min.js"></script><script src="/static/js/simbla.js?v=2.0.4"></script><script src="https://www.google.com/recaptcha/api.js?onload=onloadRecaptcha&render=explicit" async defer></script></body>
  
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<div class="paragraph" style="text-align:center;"><font size="5">Our circuit was designed to utilize specific parts so that when the E-coli cells containing this gene circuit are exposed to arsenic, the Green Florescent Protein (GFP) is produced making the ticket glow under a blue light.</font><br /></div>
 
 
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<div class="paragraph"><strong><u>Phase one</u></strong><ul><li>Test efficacy of the circuit in vivo<ul><li>grow transformed e.coli with plasmid circuit in Arsenic laced media</li><li>Serial dilution of &nbsp;arsenic and arsenite &nbsp;to find the lowest activation amount of the circuit in vivo</li></ul></li></ul> <strong><u>Phase two</u></strong><ul><li>Test the efficacy of the plasmid circuit in situ<ul><li>perform above experiments with minipreped plasmid circuit<br /></li><li>Titrate both circuit and trigger to find optimal mixture</li><li>standardize reactions&nbsp;</li><li>Test on paper matrix<br /></li></ul></li></ul> <strong><u>Phase three</u></strong><br />Test efficacy of freeze drying circuit on paper for distribution and storage purposes.&nbsp;</div>
 
 
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Revision as of 17:41, 14 June 2017

Cadets2Vets

Design

The foundation of our circuit

Our circuit was designed to utilize specific parts so that when the E-coli cells containing this gene circuit are exposed to arsenic, the Green Florescent Protein (GFP) is produced making the ticket glow under a blue light. 

PHASE 1

  • Test efficacy of the circuit in vivo 
  • Grow transformed e.coli with plasmid circuit in Arsenic laced media 
  • Serial dilution of arsenic and arsenite to find the lowest activation amount of the circuit in vivo

PHASE 2

  • Test the efficacy of the plasmid circuit in situ 
  • Perform above experiments with minipreped plasmid circuit 
  • Titrate both circuit and trigger to find optimal mixture 
  • Standardize reactions  
  • Test on paper matrix

PHASE 3

  • Test efficacy of freeze drying circuit on paper for distribution and storage purposes.  


SIMBLAWebsite Builder

Design

Design is the first step in the design-build-test cycle in engineering and synthetic biology. Use this page to describe the process that you used in the design of your parts. You should clearly explain the engineering principles used to design your project.

This page is different to the "Applied Design Award" page. Please see the Applied Design page for more information on how to compete for that award.

What should this page contain?
  • Explanation of the engineering principles your team used in your design
  • Discussion of the design iterations your team went through
  • Experimental plan to test your designs