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<p><center><img src="https://static.igem.org/mediawiki/2017/d/df/CuhkSWITHcandidate.PNG" style="width:700px;height:200px;" ></center></p> | <p><center><img src="https://static.igem.org/mediawiki/2017/d/df/CuhkSWITHcandidate.PNG" style="width:700px;height:200px;" ></center></p> | ||
− | < | + | <br><br><br> |
+ | <table width="100%"> | ||
+ | <tr> | ||
+ | <th colspan="4"><b>Thermodynamic parameters of chosen influenza switches</b></th> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <th>Switch Candidate</th> | ||
+ | <th>MFE RBS-Linker</th> | ||
+ | <th>MFE Switch</th> | ||
+ | <th>MFE Difference</th> | ||
+ | </tr> | ||
− | < | + | <tr> |
+ | <td>H5-1</td> | ||
+ | <td>-3.8</td> | ||
+ | <td>-19.1</td> | ||
+ | <td>+32.1</td> | ||
+ | </tr> | ||
− | < | + | <tr> |
− | < | + | <td>H5-2</td> |
− | < | + | <td>-3.8</td> |
− | + | <td>-21.1</td> | |
− | </ | + | <td>+34.8</td> |
+ | </tr> | ||
− | < | + | <tr> |
− | + | <td>H5-3</td> | |
− | </ | + | <td>-3.8</td> |
− | </ | + | <td>-24</td> |
+ | <td>+37.9</td> | ||
+ | </tr> | ||
− | < | + | <tr> |
− | < | + | <td>H7-1</td> |
+ | <td>-3.8</td> | ||
+ | <td>-24.5</td> | ||
+ | <td>+41.4</td> | ||
+ | </tr> | ||
− | < | + | <tr> |
− | + | <td>H7-2</td> | |
− | < | + | <td>-3.8</td> |
− | + | <td>-17.8</td> | |
− | </ | + | <td>+34.2</td> |
+ | </tr> | ||
− | </ | + | <tr> |
− | < | + | <td>H7-3</td> |
+ | <td>-3.8</td> | ||
+ | <td>-16.3</td> | ||
+ | <td>+26.3</td> | ||
+ | </tr> | ||
− | < | + | <tr> |
− | < | + | <td>N1-1</td> |
− | < | + | <td>-3.8</td> |
− | + | <td>-17.1</td> | |
− | + | <td>+34.4</td> | |
− | + | </tr> | |
− | + | ||
− | < | + | |
− | < | + | |
− | + | ||
− | </ | + | |
+ | <tr> | ||
+ | <td>N1-2</td> | ||
+ | <td>-3.8</td> | ||
+ | <td>-17.1</td> | ||
+ | <td>+24</td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td>N1-3</td> | ||
+ | <td>-3.8</td> | ||
+ | <td>-19.4</td> | ||
+ | <td>+25.9</td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td>N9-1</td> | ||
+ | <td>-3.8</td> | ||
+ | <td>-22.2</td> | ||
+ | <td>+34.5</td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td>N9-2</td> | ||
+ | <td>-3.8</td> | ||
+ | <td>-17.9</td> | ||
+ | <td>+30.8</td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td>N9-3</td> | ||
+ | <td>-3.8</td> | ||
+ | <td>-21.6</td> | ||
+ | <td>+27</td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td>PB2-1</td> | ||
+ | <td>-3.8</td> | ||
+ | <td>-12.5</td> | ||
+ | <td>+34.6</td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td>PB2-2</td> | ||
+ | <td>-3.8</td> | ||
+ | <td>-24.7</td> | ||
+ | <td>+38</td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td>PB2-3</td> | ||
+ | <td>-3.8</td> | ||
+ | <td>-16</td> | ||
+ | <td>+28.2</td> | ||
+ | </tr> | ||
+ | |||
+ | |||
+ | </table> | ||
+ | |||
+ | <p>To improve CGU’s oral cancer toehold switch, we employed the screening function of our program. A toehold switch was chosen that is predicted to outperform the CGU’s switch according to the MFE RBS-Linker.</p> | ||
+ | |||
+ | |||
+ | <table width="100%"> | ||
+ | <tr> | ||
+ | <th colspan="4"><b>Thermodynamic parameters of chosen influenza switches</b></th> | ||
+ | </tr> | ||
+ | |||
+ | |||
+ | <tr> | ||
+ | <th>Switch Candidate</th> | ||
+ | <th>MFE RBS-Linker</th> | ||
+ | <th>MFE Switch</th> | ||
+ | <th>MFE Difference</th> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td>CGU’s SAT switch</td> | ||
+ | <td>-9.2</td> | ||
+ | <td>-17.4</td> | ||
+ | <td>+46.8</td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td>New SAT switch</td> | ||
+ | <td>-4.1</td> | ||
+ | <td>-24.5</td> | ||
+ | <td>+23.1</td> | ||
+ | </tr> | ||
+ | |||
+ | </table> | ||
</div> | </div> | ||
+ | |||
+ | |||
</html> | </html> | ||
+ | {{Template:Hong_Kong-CUHK_footer}} |
Revision as of 18:19, 9 October 2017