Difference between revisions of "Template:Heidelberg/safetynet/JS"

Revision as of 21:19, 26 October 2017

function createTable(name, organism, organism_safety, functionality,

                    functionality_safety, id, identity, e_value, onkogenes) {

 var table_head = [
   'Name', 'Organism', 'Group', 'Functionality', 'ID', 'Identity', 'E-Value',
   'Onkogenicity'
 ];

 var div = document.getElementById('safety_table');
 var table = document.createElement('table');
 var thead = document.createElement('thead');
 var tbody = document.createElement('tbody');

 var tr_head = document.createElement('tr');
 for (var i = 0; i < 8; i++) {
   var td_head = document.createElement('th');
   td_head.append(document.createTextNode(table_head[i]));
   tr_head.appendChild(td_head);
 }
 thead.appendChild(tr_head);

 for (var j = 0; j < organism.length; j++) {
   var table_body = [];

   table_body[0] = name[j];
   table_body[1] = organism[j];
   table_body[2] = "S" + organism_safety[j].toString();
   table_body[3] = functionality[j];

   table_body[4] = id[j];
   table_body[5] = identity[j];
   table_body[6] = e_value[j];
   table_body[7] = onkogenes[j];

   var tr_body = document.createElement('tr');
   for (var k = 0; k < 8; k++) {
     var td_body = document.createElement('td');

     if (k == 3) {

       var inner_func = table_body[k].split(',');
       for (var w = 0; w < functionality[j].split(',').length; w++) {
         var tr_inner = document.createElement('tr');
         var td_inner = document.createElement('td');
         td_inner.append(document.createTextNode(inner_func[w]));
         tr_inner.appendChild(td_inner);
         td_body.appendChild(tr_inner);
       }

     } else {
       td_body.append(document.createTextNode(table_body[k]));
       if (organism_safety[j] > 1 && k == 2) {
         td_body.style.backgroundColor = 'red';
       } else if (organism_safety[j] <= 1 && k == 2) {
         td_body.style.backgroundColor = 'green';
       } else {
         // Nothing
       }
     }

     if (functionality_safety[j][0] > 1 && k == 3) {
       td_body.style.backgroundColor = 'red';
     } else if (functionality_safety[j][0] <= 1 && k == 3) {
       td_body.style.backgroundColor = 'green';
     } else {
       // Nothing
     }
     tr_body.appendChild(td_body);
   }
   tbody.appendChild(tr_body);
 }

 table.appendChild(thead);
 table.appendChild(tbody);
 table.className = "table table-bordered mdl-shadow--4dp";
 div.appendChild(table);

}

function register_handlers() {

 $("#hyperreference1").one("click", function() {
   sequence = $("#push_sequence")[0].value;
   doSafetyQuery(sequence).then(function(result) {
     console.log(result);
     nhits = result.hits.length;
     name = [];
     organism = [];
     organism_safety = [];
     functionality = [];
     functionality_safety = [];
     id = [];
     identity = [];
     e_value = [];
     onkogenes = [];
     console.log("ORGANISMS: ", result.organisms);
     for (idx = 0; idx < nhits; ++idx) {
       name.push(result.functions[idx]);
       organism.push(result.matches[idx]);
       organism_safety.push(result.organisms[idx][1]);
       functionality.push(result.functions[idx]);
       functionality_safety.push(result.onkogenes[idx]);
       id.push(result.hits[idx].id);
       identity.push(result.hits[idx].identity);
       e_value.push(result.hits[idx].evalue);
       onkogenes.push(result.onkogenes[idx]);
     }
     createTable(name, organism, organism_safety, functionality,
                 functionality_safety, id, identity, e_value, onkogenes);
   });
 });
 $("#hyperreference2").one("click", function() {
   rid = $("#get_sequence")[0].value;
   doSafetyQueryWithRID(rid).then(function(result) {
     console.log(result);
     let nhits = result.hits.length;
     var name = [];
     var organism = [];
     var organism_safety = [];
     var functionality = [];
     var functionality_safety = [];
     var id = [];
     var identity = [];
     var e_value = [];
     var onkogenes = [];
     for (idx = 0; idx < nhits; ++idx) {
       console.log("ORGANISMS: ", result.organisms[idx][1]);
       name.push(result.functions[idx]);
       organism.push(result.matches[idx]);
       organism_safety.push(result.organisms[idx][1]);
       functionality.push(result.functions[idx]);
       functionality_safety.push(result.onkogenes[idx]);
       id.push(result.hits[idx].id);
       identity.push(result.hits[idx].identity);
       e_value.push(result.hits[idx].evalue);
       onkogenes.push(result.onkogenes[idx]);
     }
     createTable(name, organism, organism_safety, functionality,
                 functionality_safety, id, identity, e_value, onkogenes);
   });
 });

}

register_handlers();