Difference between revisions of "Team:ETH Zurich/Applied Design"

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<h1 class="headline">CATE Treatment (Applied Design)</h1>
 
<h1 class="headline">CATE Treatment (Applied Design)</h1>
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<section class="first">
 
<section class="first">
    <h1>Overview</h1>
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     <p>We envision the treatment with our novel bacterial cancer therapy, CATE, to follow the depicted strategy. A <em>short duration</em>, <em>enhanced safety</em> and <em>overall effectiveness</em> are expected to be decisive factors for choosing to treat with CATE instead of conventional therapies. </p>
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    <p>The following steps will guide you through the treatment:</p>
     <p>This is a prize for the team that has developed a synbio product to solve a real world problem in the most elegant way. The students will have considered how well the product addresses the problem versus other potential solutions, how the product integrates or disrupts other products and processes, and how its lifecycle can more broadly impact our lives and environments in positive and negative ways. To compete for the <a href="https://2017.igem.org/Judging/Awards">Best Applied Design prize</a>, please describe your work on this page and also fill out the description on the <a href="https://2017.igem.org/Judging/Judging_Form">judging form</a>. </p>
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-->
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</section>
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<section>
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<p>
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We envision the treatment with our novel bacterial cancer therapy - CATE, to follow the depicted strategy. A <em>short duration</em>, <em>enhanced safety</em> and <em>overall effectiveness</em> are expected to be decisive factors for choosing to treat with CATE instead of conventional therapies. </p>
+
<p>The following steps will guide you through the treatment:</p>
+
 
+
        <fieldset>
+
            <legend>1. Administration of the Bacterial Therapeutic</legend>
+
            <p>Following diagnostic procedures and the decision to use CATE, the patient will receive a soluble formulation of CATE in an intravenous injection. This is a quick and easy step for both the patient and the doctor.</p>
+
        </fieldset>
+
        <fieldset>
+
            <legend>2. Colonization of the Tumor Tissue</legend>
+
            <p>CATE distributes throughout the body and specifically populates the tumor tissue. Only in this special microenvironment, rich in nutrients and hidden from the immune system, CATE can grow to a high cell density. </p>
+
        </fieldset> 
+
 
+
        <!--<hr> <p>CHECKPOINT 1</p>-->
+
 
+
        <fieldset class="checkpoint">
+
            <legend>3. Tumor Sensing </legend>
+
            <div class="legend_checkpoint">CHECKPOINT 1</div>
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            <p>CATE is designed so that the two conditions necessary to pass the safety Checkpoint1 are only present in the tumor tissue and not in the healthy tissue. </p>
+
            <ul>
+
                <li>The first condition is the high cell density of the bacteria, that CATE can only reach in tumors because of their unique microenvironment.</li>
+
                <li>The second condition is the presence of a high concentration of lactate, a molecule typically overproduced by cancer cells. </li>
+
            </ul>
+
            <p>Only If these two conditions are satisfied, CATE will pass Checkpoint 1 and proceed to the next step. </p>
+
        </fieldset>  
+
  
         <p>Read more about how CATE can identify tumors: <a href="https://2017.igem.org/Team:ETH_Zurich/Circuit/Fa_Tumor_Sensor">Function A: Tumor Sensor</a></p>
+
    <fieldset>
 +
        <legend>1. Administration of the Bacterial Therapeutic</legend>
 +
         <p>Following diagnostic procedures and the decision to use CATE, the patient will receive a soluble formulation of CATE in an intravenous injection. This is a quick and easy step for both the patient and the doctor.</p>
 +
    </fieldset>
  
         <!--<hr>-->
+
    <fieldset>
 +
         <legend>2. Colonization of the Tumor Tissue</legend>
 +
        <p>CATE distributes throughout the body and specifically populates the tumor tissue. Only in this special microenvironment, rich in nutrients and hidden from the immune system, CATE can grow to a high cell density. </p>
 +
    </fieldset>  
  
        <fieldset>
+
    <fieldset class="checkpoint">
            <legend>4. Anti-Cancer Toxin and MRI Contrast Agent Production</legend>
+
        <legend>3. Tumor Sensing</legend>
            <p>To pass Checkpoint 1, cell density of the bacteria in the tumor has to be high enough to kill it. Once this has been achieved, CATE will start to produce an Anti-Cancer Toxin. However, the toxin will not be released yet. It will reside in CATE until the second checkpoint has been passed. At the same time, CATE will also produce an MRI Contrast Agent. This will allow the doctor to confirm through an MRI scan that the Toxin is ready and the bacteria have indeed colonized the correct location. </p>
+
        <div class="legend_checkpoint">CHECKPOINT 1</div>
         </fieldset>
+
        <p>CATE is designed so that the two conditions necessary to pass the safety Checkpoint1 are only present in the tumor tissue and not in the healthy tissue. </p>
       
+
         <ul>
        <p>Find out more about <a href="https://2017.igem.org/Team:ETH_Zurich/Circuit/Fb_Contrast_Agent">Function B: MRI Contrast Agent</a></p>
+
            <li>The first condition is the high cell density of the bacteria, that CATE can only reach in tumors because of their unique microenvironment.</li>
         <p>Find out more about <a href="https://2017.igem.org/Team:ETH_Zurich/Circuit/Fc_Anti_Cancer_Toxin">Function C: Anti-Cancer Toxin</a></p>
+
            <li>The second condition is the presence of a high concentration of lactate, a molecule typically overproduced by cancer cells.</li>
 +
        </ul>
 +
         <p>Only If these two conditions are satisfied, CATE will pass Checkpoint 1 and proceed to the next step.</p>
 +
    </fieldset>  
  
        <fieldset>
+
    <p>Read more about how CATE can identify tumors: <a href="https://2017.igem.org/Team:ETH_Zurich/Circuit/Fa_Tumor_Sensor">Function A: Tumor Sensor</a></p>
            <legend>5. Magnetic Resonance Imaging</legend>
+
            <p>The patient is examined in an MRI machine and the doctor can inspect the location of CATE. Because the MRI Contrast Agent is produced together with the Anti-Cancer Toxin, the doctor can also be indirectly assured that enough of the Toxin is available to eradicate the tumor. This additional security step is unique to our bacterial cancer therapy with CATE. Neither conventional cancer treatments that include systemically administered toxic compounds, nor modern targeted therapies with engineered immune cells have the advantage of combining a molecular tumor-recognition with a location-approved toxicity-activation.</p>
+
        </fieldset>  
+
  
        <fieldset>
+
    <fieldset>
            <legend>6. Focused Ultrasound</legend>
+
        <legend>4. Anti-Cancer Toxin and MRI Contrast Agent Production</legend>
            <p>This step is directly coupled to Magnetic Resonance Imaging. Immediately after examining the MRI scan, the doctor can apply focused ultrasound specifically to the tumor site. Focused ultrasound is an emerging new medical technology that is already built in in modern MRI devices. It allows for high-energy sound waves outside of the audible spectrum (the same ones used by bats for navigation) to transmit their energy to a specific location in the inside of the body. This results in a temperature increase from 37&deg;C to 45&deg;C in a narrowly defined area of the tumor. It is applied to the tumor where CATE is present for 3 h.</p>
+
        <p>To pass Checkpoint 1, cell density of the bacteria in the tumor has to be high enough to kill it. Once this has been achieved, CATE will start to produce an Anti-Cancer Toxin. However, the toxin will not be released yet. It will reside in CATE until the second checkpoint has been passed. At the same time, CATE will also produce an MRI Contrast Agent. This will allow the doctor to confirm through an MRI scan that the Toxin is ready and the bacteria have indeed colonized the correct location.</p>
        </fieldset>  
+
    </fieldset>
  
      <!--<hr> <p>CHECKPOINT 2</p>-->
+
    <p>Find out more about <a href="https://2017.igem.org/Team:ETH_Zurich/Circuit/Fb_Contrast_Agent">Function B: MRI Contrast Agent</a></p>
 +
    <p>Find out more about <a href="https://2017.igem.org/Team:ETH_Zurich/Circuit/Fc_Anti_Cancer_Toxin">Function C: Anti-Cancer Toxin</a></p>
  
        <fieldset class="checkpoint">
+
    <fieldset>
            <legend>7. Heat Sensing</legend>
+
        <legend>5. Magnetic Resonance Imaging</legend>
            <div class="legend_checkpoint">CHECKPOINT 2</div>
+
        <p>The patient is examined in an MRI machine and the doctor can inspect the location of CATE. Because the MRI Contrast Agent is produced together with the Anti-Cancer Toxin, the doctor can also be indirectly assured that enough of the Toxin is available to eradicate the tumor. This additional security step is unique to our bacterial cancer therapy with CATE. Neither conventional cancer treatments that include systemically administered toxic compounds, nor modern targeted therapies with engineered immune cells have the advantage of combining a molecular tumor-recognition with a location-approved toxicity-activation.</p>
            <p>The change in the temperature, from 37&deg;C to 45&deg;C, caused by the doctor via focused ultrasound, alerts CATE that Checkpoint 2 has been passed due to the release of a protein that has been blocking the activation of the Heat Sensing circuit. Then CATE continues with the next step of the treatment procedure.</p>
+
    </fieldset>  
        </fieldset>  
+
  
         <p>Find out more about
+
    <fieldset>
<a href="https://2017.igem.org/Team:ETH_Zurich/Circuit/Fd_Heat_Sensor">Function D: Heat Sensor</a></p>
+
         <legend>6. Focused Ultrasound</legend>
 +
        <p>This step is directly coupled to Magnetic Resonance Imaging. Immediately after examining the MRI scan, the doctor can apply focused ultrasound specifically to the tumor site. Focused ultrasound is an emerging new medical technology that is already built in in modern MRI devices. It allows for high-energy sound waves outside of the audible spectrum (the same ones used by bats for navigation) to transmit their energy to a specific location in the inside of the body. This results in a temperature increase from 37&deg;C to 45&deg;C in a narrowly defined area of the tumor. It is applied to the tumor where CATE is present for 3 h.</p>
 +
    </fieldset>  
  
         <!--<hr>-->
+
    <fieldset class="checkpoint">
 +
         <legend>7. Heat Sensing</legend>
 +
        <div class="legend_checkpoint">CHECKPOINT 2</div>
 +
        <p>The change in the temperature, from 37&deg;C to 45&deg;C, caused by the  doctor via focused ultrasound, alerts CATE that Checkpoint 2 has been passed due to the release of a protein that has been blocking the activation of the Heat Sensing circuit. Then CATE continues with the next step of the treatment procedure.</p>
 +
    </fieldset>  
  
        <fieldset>
+
    <p>Find out more about
            <legend>8. Cell Lysis and Toxin Release</legend>
+
    <a href="https://2017.igem.org/Team:ETH_Zurich/Circuit/Fd_Heat_Sensor">Function D: Heat Sensor</a></p>
            <p>After successfully going through Checkpoint 2, CATE is designed to produce a special protein that originates from bacteria-killing phages. This protein interferes with the bacterial cell wall synthesis which leads to pore formation and ultimately, the breakdown of CATE. This way, the previously accumulated Anti-Cancer Toxin is released to the tumor tissue.</p>
+
        </fieldset>  
+
  
         <p>Find out more about <a href="https://2017.igem.org/Team:ETH_Zurich/Circuit/Fe_Cell_Lysis">Function E: Cell Lysis</a></p>
+
    <fieldset>
 +
         <legend>8. Cell Lysis and Toxin Release</legend>
  
        <fieldset>
+
    </fieldset>  
            <legend>9. Cancer Killing</legend>
+
            <p>After the Anti-Cancer Toxin gets released, it enters the malignant cells. Once inside, it interferes with the cell cycle through stabilization of a  tumor-suppressor protein. This interference leads to the death of cancer cells through apoptosis. With this, CATE’s mission is accomplished.</p>
+
        </fieldset>  
+
  
        <!--<p>Read more about
+
    <p>Find out more about <a href="https://2017.igem.org/Team:ETH_Zurich/Circuit/Fe_Cell_Lysis">Function E: Cell Lysis</a></p>
<a href="https://2017.igem.org/Team:ETH_Zurich/Circuit/Fc_Cancer_Toxin">Function C: Anti-Cancer Toxin</a></p>-->
+
  
 +
    <fieldset>
 +
        <legend>9. Cancer Killing</legend>
 +
        <p>After the Anti-Cancer Toxin gets released, it enters the malignant cells. Once inside, it interferes with the cell cycle through stabilization of a  tumor-suppressor protein. This interference leads to the death of cancer cells through apoptosis. With this, CATE’s mission is accomplished.</p>
 +
    </fieldset>
 
</section>
 
</section>
<!--
 
<section>
 
    <h1>Inspiration</h1>
 
    <p>Take a look at what some teams accomplished for this prize.</p>
 
    <ul>
 
        <li><a href="https://2016.igem.org/Team:NCTU_Formosa/Design">2016 NCTU Formosa</a></li>
 
        <li><a href="https://2016.igem.org/Team:HSiTAIWAN/Product?locationId=Design">2016 HSiTAIWAN</a></li>
 
        <li><a href="https://2016.igem.org/Team:Pasteur_Paris/Design">2016 Pasteur Paris</a></li>
 
    </ul>
 
</section>-->
 
 
</main>
 
</main>
 
</html>
 
</html>
 
{{ETH_Zurich/Footer_N}}
 
{{ETH_Zurich/Footer_N}}

Revision as of 15:23, 29 October 2017

CATE Treatment (Applied Design)

We envision the treatment with our novel bacterial cancer therapy, CATE, to follow the depicted strategy. A short duration, enhanced safety and overall effectiveness are expected to be decisive factors for choosing to treat with CATE instead of conventional therapies.

The following steps will guide you through the treatment:

1. Administration of the Bacterial Therapeutic

Following diagnostic procedures and the decision to use CATE, the patient will receive a soluble formulation of CATE in an intravenous injection. This is a quick and easy step for both the patient and the doctor.

2. Colonization of the Tumor Tissue

CATE distributes throughout the body and specifically populates the tumor tissue. Only in this special microenvironment, rich in nutrients and hidden from the immune system, CATE can grow to a high cell density.

3. Tumor Sensing
CHECKPOINT 1

CATE is designed so that the two conditions necessary to pass the safety Checkpoint1 are only present in the tumor tissue and not in the healthy tissue.

  • The first condition is the high cell density of the bacteria, that CATE can only reach in tumors because of their unique microenvironment.
  • The second condition is the presence of a high concentration of lactate, a molecule typically overproduced by cancer cells.

Only If these two conditions are satisfied, CATE will pass Checkpoint 1 and proceed to the next step.

Read more about how CATE can identify tumors: Function A: Tumor Sensor

4. Anti-Cancer Toxin and MRI Contrast Agent Production

To pass Checkpoint 1, cell density of the bacteria in the tumor has to be high enough to kill it. Once this has been achieved, CATE will start to produce an Anti-Cancer Toxin. However, the toxin will not be released yet. It will reside in CATE until the second checkpoint has been passed. At the same time, CATE will also produce an MRI Contrast Agent. This will allow the doctor to confirm through an MRI scan that the Toxin is ready and the bacteria have indeed colonized the correct location.

Find out more about Function B: MRI Contrast Agent

Find out more about Function C: Anti-Cancer Toxin

5. Magnetic Resonance Imaging

The patient is examined in an MRI machine and the doctor can inspect the location of CATE. Because the MRI Contrast Agent is produced together with the Anti-Cancer Toxin, the doctor can also be indirectly assured that enough of the Toxin is available to eradicate the tumor. This additional security step is unique to our bacterial cancer therapy with CATE. Neither conventional cancer treatments that include systemically administered toxic compounds, nor modern targeted therapies with engineered immune cells have the advantage of combining a molecular tumor-recognition with a location-approved toxicity-activation.

6. Focused Ultrasound

This step is directly coupled to Magnetic Resonance Imaging. Immediately after examining the MRI scan, the doctor can apply focused ultrasound specifically to the tumor site. Focused ultrasound is an emerging new medical technology that is already built in in modern MRI devices. It allows for high-energy sound waves outside of the audible spectrum (the same ones used by bats for navigation) to transmit their energy to a specific location in the inside of the body. This results in a temperature increase from 37°C to 45°C in a narrowly defined area of the tumor. It is applied to the tumor where CATE is present for 3 h.

7. Heat Sensing
CHECKPOINT 2

The change in the temperature, from 37°C to 45°C, caused by the doctor via focused ultrasound, alerts CATE that Checkpoint 2 has been passed due to the release of a protein that has been blocking the activation of the Heat Sensing circuit. Then CATE continues with the next step of the treatment procedure.

Find out more about Function D: Heat Sensor

8. Cell Lysis and Toxin Release

Find out more about Function E: Cell Lysis

9. Cancer Killing

After the Anti-Cancer Toxin gets released, it enters the malignant cells. Once inside, it interferes with the cell cycle through stabilization of a tumor-suppressor protein. This interference leads to the death of cancer cells through apoptosis. With this, CATE’s mission is accomplished.