|
|
Line 23: |
Line 23: |
| <br> | | <br> |
| <p> | | <p> |
− | <h1 class="grey-text heading-weight" align = "center">Background</h1> | + | <h1 class="grey-text heading-weight" align = "center">ProtoMetrics</h1> |
| <p> | | <p> |
| <br> | | <br> |
Line 29: |
Line 29: |
| <br> | | <br> |
| <br> | | <br> |
− | <p id = "doubleSpace" class="p-font grey-text">Two years ago the Michigan Software 2014 team began development | + | <p id = "doubleSpace" class="p-font grey-text"> |
− | of ProtoCat 1.0. Like many innovative ideas, ProtoCat began because of a problem.
| + | Describe ProtoMetrics Here |
− | <a class="a-over" href="https://peerj.com/articles/148">Studies</a> have estimated
| + | |
− | that only 10-25% of published scientific results are reproducible. A 2014 survey conducted
| + | |
− | by the Michigan Software team confirmed that the repeatability problem exists in synthetic
| + | |
− | biology, with every scientist surveyed reporting prior struggles with replicating protocols.
| + | |
− | The majority of these scientists indicated unclear language and missing steps are the greatest
| + | |
− | contributors to the irreproducibility of synthetic biology protocols. A <a class="a-over"
| + | |
− | href="https://2015.igem.org/Team:Michigan_Software/Outreach">second study</a> conducted by last
| + | |
− | year's Michigan Software team only further confirmed the sentiments of the first study. These
| + | |
− | issues are what ProtoCat has been designed to solve.
| + | |
| </p> | | </p> |
| <br> | | <br> |
Line 46: |
Line 37: |
| <br> | | <br> |
| <p> | | <p> |
− | <h1 class="grey-text heading-weight" align = "center">Solution</h1> | + | <h1 class="grey-text heading-weight" align = "center">ProtoChat</h1> |
− | </p> | + | <p> |
− | <br>
| + | <br> |
| <div class="row" style="border-bottom:thin solid;"></div> | | <div class="row" style="border-bottom:thin solid;"></div> |
| <br> | | <br> |
| <br> | | <br> |
− | <p id = "doubleSpace" class="p-font grey-text">Every respondent of the second survey indicated that they | + | <p id = "doubleSpace" class="p-font grey-text"> |
− | would use a database to browse and download protocols, with over 85% indicating that
| + | Describe ProtoChat Here |
− | they would upload and maintain their own protocols if such a site existed. ProtoCat 3.0
| + | </p><br> |
− | is a free database of crowd sourced protocols designed to make existing protocols more
| + | |
− | repeatable and enable more accurate computational models of biological systems. We believe
| + | |
− | this can most efficiently be accomplished with a commitment to open source protocols and a
| + | |
− | broader more active community of digital troubleshooters. ProtoCat 3.0 works to establish
| + | |
− | such a community by giving anyone with an internet connection or smartphone access to a
| + | |
− | repository of synthetic biology protocols collected from all over the world. Additionally,
| + | |
− | ProtoCat 3.0 encourages the development of higher quality, more repeatable protocols by
| + | |
− | allowing users to document, rate, review, and edit existing methods.
| + | |
− | </p> | + | |
| <br> | | <br> |
| <br> | | <br> |
| <br> | | <br> |
− | <br>
| |
− | <p>
| |
− | <h1 class="grey-text heading-weight" align = "center">ProtoCat 4.0</h1>
| |
− | </p>
| |
− | <br>
| |
− | <div class="row" style="border-bottom:thin solid;"></div>
| |
− | <br>
| |
− | <br>
| |
− | <p id = "doubleSpace" class="p-font grey-text">ProtoCat 4.0 is optimized for collaboration among users
| |
− | and offers the best user experinece we have developed. We've added features such as threaded comments,
| |
− | notifications, protocol favoriting, and a new chat system called ProtoChat in this
| |
− | years verions of ProtoCat. Now users can communicate through commenting and chatting
| |
− | to make improvements on existing protocols or favorite one they like to quickly relocate
| |
− | it. ProtoCat also recieved a password recover system, notifications, and a better search
| |
− | algorithm to search more fields of a protocol. In addition, users can now create drafts
| |
− | of a protocol which allows them to start and finish a new protocol at their convienience.
| |
− | These are are all important features that contribute to a better user experience and our
| |
− | best version of ProtoCat.
| |
− | </p>
| |
| </div> | | </div> |
| <br> | | <br> |