Difference between revisions of "Team:HBUT-China/Results"

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        <span class="txt1">Nickel ion!</span>       
 
        <span class="txt2">Heavy metal pollutants!</span>                                 
 
        <span class="txt3 short">For this year¡¯s iGEM Competition, our team will be focusing on putting forward a biological approach to detect nickel ions as a heavy metal contaminant in the natural environment</span>                                   
 
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        <span class="txt1 blue txt_right2">In order to achieve this goal, we use a nickel-sensitive repressive promoter (pncrA)</span>     
 
        <span class="txt1 blue txt_right2">In the absence of nickel ions, the repressor protein (NcrB) binds to the promoter, preventing the expression of the subsequent gene</span>
 
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<h5>So our device only responds to nickel ions.</h5>
 
<h5>So our device only responds to nickel ions.</h5>
 
<small class="bigtitle">Quantitative analysis:</small>
 
<small class="bigtitle">Quantitative analysis:</small>
<h5>At the initial induction concentration of OD0.8, and the Induction time is 2 hours.  Under this condition, the nickel ion concentration has a significant function relationship with the fluorescence intensity.</h5>
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<h5>The initial induction concentration was OD0.8, and the induction time was 2 hours.  Under these conditions, the nickel ion concentration had a significant fucntional relationship with the fluorescence itensity.</h5>
 
<h5>Especially in the nickel ion concentration of 10-6mmol / L to 10-4mmol / L between.</h5>
 
<h5>Especially in the nickel ion concentration of 10-6mmol / L to 10-4mmol / L between.</h5>
  
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<small class="bigtitle">Assumptions:</small>
 
<small class="bigtitle">Assumptions:</small>
 
<p>The degradation of  and other substances are linear.</p>
 
<p>The degradation of  and other substances are linear.</p>
<p>Each cell has the same state.</p>
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<p>Every cell has the same state.</p>
<p>The reaction in the process satisfies the first-order kinetic reaction.</p>
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<p>The reaction in the process satisifies the requirements of the first-order kinetic reaction.</p>
<h5>Then we got some conclusions through modeling.</h5>
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<h5>Then we reached some conclusions through modeling.</h5>
 
<small class="bigtitle">Incomplete Repression: </small>
 
<small class="bigtitle">Incomplete Repression: </small>
 
<h5>Under incomplete repression, the bacteria express red fluorescent proteins without the presence of nickel ions.</h5>
 
<h5>Under incomplete repression, the bacteria express red fluorescent proteins without the presence of nickel ions.</h5>
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<small class="bigtitle">Cytotoxicity:</small>
 
<small class="bigtitle">Cytotoxicity:</small>
<p>We found that a high concentration of nickel ions will reduce the expression of fluorescence, because nickel ions have cytotoxicity. </p>
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<p>Or experiment is designed to induce the expression fo fluorescent proteins in the presence of nickel ions, however, we found that above a certain concentration of nickel ions, the expression of fluorescent proteins will be reduced due to nickel ion cytotoxicity.</p>
 
<p>The July 20 experimental data is as follows:</p>
 
<p>The July 20 experimental data is as follows:</p>
 
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Revision as of 03:06, 1 November 2017

We will show our results from three aspects:
Qualitative analysis:
After 12 hours of incubation(LB,37℃,200r/min), we observed the bacteria on a fluorescence microscope.
In the medium with the addition of nickel ions, we can see visible red fluorescence.
this is a photo
In other media, there is no such phenomenon. The whole vision is black.
this is a photo
this is a photo
this is a photo
this is a photo
this is a photo
So our device only responds to nickel ions.
Quantitative analysis:
The initial induction concentration was OD0.8, and the induction time was 2 hours. Under these conditions, the nickel ion concentration had a significant fucntional relationship with the fluorescence itensity.
Especially in the nickel ion concentration of 10-6mmol / L to 10-4mmol / L between.
this is a photo
model:
At first, we made some assumptions.
Assumptions:

The degradation of and other substances are linear.

Every cell has the same state.

The reaction in the process satisifies the requirements of the first-order kinetic reaction.

Then we reached some conclusions through modeling.
Incomplete Repression:
Under incomplete repression, the bacteria express red fluorescent proteins without the presence of nickel ions.
The incomplete repression of promoters is a major issue in our fluorescence system. This issue was particularly observed in following diagram.
this is a photo
The solution of this differential equation is as follows:
this is a photo
Cytotoxicity:

Or experiment is designed to induce the expression fo fluorescent proteins in the presence of nickel ions, however, we found that above a certain concentration of nickel ions, the expression of fluorescent proteins will be reduced due to nickel ion cytotoxicity.

The July 20 experimental data is as follows:

this is a photo

The different equation of the red fluorescent protein is then modified to:

this is a photo

Where

this is a photo