Difference between revisions of "Team:UNC-Asheville/InterLab"

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<h2> LUDOX-S40 was used to obtain a conversion factor to normalize the absorbance measurements to a standard optical density of 600 nanometers (OD 600). The correction factor was determined by measuring LUDOX-S40 in the multimode plate reader Synergy HTX (BioTek, Software gen5 2.09), and comparing the subsequent data to the optical density reference point. To normalize the fluorescence measurements, the fluorescence readings were obtained from a serial dilution of fluorescein in phosphate buffered saline solution (PBS).<br><br> A dilution series of fluorescein in 4 replicates was created, and the fluorescence was quantified in a 96 well plate (Grenier Half Area Flat Bottom). The resulting data was used to correct the cell based readings to an equivalent fluorescein concentration, and subsequently converted to a concentration of GFP. The creation of a standard curve for the correction factor and fluorescence measurements allowed for the direct comparison of data between labs.<br><br> The E. coli strain K-12 DH5-alpha was used for the calibration measurements. Two colonies were chosen from the performed transformation and inoculated in 5 mL cultures of LB and chloramphenicol. Both strains were incubated overnight at 37℃ and 220 rpm. The OD600 was measured for both of the overnight cultures. <br><br>Each culture was diluted to a target OD600 of 0.02 in a 12 m​l medium of LB with chloramphenicol. The diluted cultures were incubated at 37°C and 220 rpm. 500 µL of each culture was taken at 0, 2, 4, and 6 hours of incubation. The postliminary data was used to create the calibration curve. </h2>
 
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<h2> LUDOX-S40 was used to obtain a conversion factor to normalize the absorbance measurements to a standard optical density of 600 nanometers (OD 600). The correction factor was determined by measuring LUDOX-S40 in the multimode plate reader Synergy HTX (BioTek, Software gen5 2.09), and comparing the subsequent data to the optical density reference point. To normalize the fluorescence measurements, the fluorescence readings were obtained from a serial dilution of fluorescein in phosphate buffered saline solution (PBS).<br><br> A dilution series of fluorescein in 4 replicates was created, and the fluorescence was quantified in a 96 well plate (Grenier Half Area Flat Bottom). The resulting data was used to correct the cell based readings to an equivalent fluorescein concentration, and subsequently converted to a concentration of GFP. The creation of a standard curve for the correction factor and fluorescence measurements allowed for the direct comparison of data between labs.<br><br> The E. coli strain K-12 DH5-alpha was used for the calibration measurements. Two colonies were chosen from the performed transformation and inoculated in 5 mL cultures of LB and chloramphenicol. Both strains were incubated overnight at 37℃ and 220 rpm. The OD600 was measured for both of the overnight cultures. <br><br>Each culture was diluted to a target OD600 of 0.02 in a 12 m​l medium of LB with chloramphenicol. The diluted cultures were incubated at 37°C and 220 rpm. 500 µL of each culture was taken at 0, 2, 4, and 6 hours of incubation. The postliminary data was used to create the calibration curve. </h2>
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Revision as of 01:52, 2 November 2017

About Us

Interlab Measurement Assay

Interlab Measurement Assay

We didn't break the expensive machine!




Results


The Protocol


LUDOX-S40 was used to obtain a conversion factor to normalize the absorbance measurements to a standard optical density of 600 nanometers (OD 600). The correction factor was determined by measuring LUDOX-S40 in the multimode plate reader Synergy HTX (BioTek, Software gen5 2.09), and comparing the subsequent data to the optical density reference point. To normalize the fluorescence measurements, the fluorescence readings were obtained from a serial dilution of fluorescein in phosphate buffered saline solution (PBS).

A dilution series of fluorescein in 4 replicates was created, and the fluorescence was quantified in a 96 well plate (Grenier Half Area Flat Bottom). The resulting data was used to correct the cell based readings to an equivalent fluorescein concentration, and subsequently converted to a concentration of GFP. The creation of a standard curve for the correction factor and fluorescence measurements allowed for the direct comparison of data between labs.

The E. coli strain K-12 DH5-alpha was used for the calibration measurements. Two colonies were chosen from the performed transformation and inoculated in 5 mL cultures of LB and chloramphenicol. Both strains were incubated overnight at 37℃ and 220 rpm. The OD600 was measured for both of the overnight cultures.

Each culture was diluted to a target OD600 of 0.02 in a 12 m​l medium of LB with chloramphenicol. The diluted cultures were incubated at 37°C and 220 rpm. 500 µL of each culture was taken at 0, 2, 4, and 6 hours of incubation. The postliminary data was used to create the calibration curve.