Difference between revisions of "Team:Arizona State/Experiments"

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</ol>
 
</ol>
 
2. Lyse Cells
 
2. Lyse Cells
a. Lyse the resuspended cells by adding 200 µL of the Lysis Solution
+
<ol type="a">
b. Mix the contents by gentle inversion (6-8 times) until the mixture becomes clear and viscous (Don’t vortex)
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<li> Lyse the resuspended cells by adding 200 µL of the Lysis Solution </li>
c. Do not allow the lysis reaction to exceed 5 minutes
+
<li> Mix the contents by gentle inversion (6-8 times) until the mixture becomes clear and viscous (Don’t vortex) </li>
 +
<li> Do not allow the lysis reaction to exceed 5 minutes </li>
 +
</ol>
 
3. Neutralize
 
3. Neutralize
a. Precipitate the cell debris by adding 350 µL of the Neutralization/Binding Solution
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<ol type="a">
b. Gently invert the tube 4-6 times
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<li> Precipitate the cell debris by adding 350 µL of the Neutralization/Binding Solution </li>
c. Pellet the cell debris by centrifuging at ≥ 12,000 x g or maximum speed for 10 minutes
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<li> Gently invert the tube 4-6 times </li>
d. Cell debris, proteins, lipids, SDS, and chromosomal DNA should fall out as a cloudy, viscous precipitate.
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<li> Pellet the cell debris by centrifuging at ≥ 12,000 x g or maximum speed for 10 minutes </li>
e. If the supernatant contains a large amount of floating particulates after centrifugation, re-centrifuge the supernatant  
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<li> Cell debris, proteins, lipids, SDS, and chromosomal DNA should fall out as a cloudy, viscous precipitate. </li>
 +
<li> If the supernatant contains a large amount of floating particulates after centrifugation, re-centrifuge the supernatant </li>
 +
</ol>
 
4. Prepare Column
 
4. Prepare Column
a. Insert a GenElute Miniprep Binding Column into a provided micro-centrifuge tube, if not already assembled
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<ol type="a">
b. Add 500 µL of the Column Preparation Solution to each miniprep column and centrifuge at ≥ 12,000 x g for 30 seconds to 1 minute
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<li> Insert a GenElute Miniprep Binding Column into a provided micro-centrifuge tube, if not already assembled </li>
c. Discard the flow-through liquid
+
 
 +
<li> Add 500 µL of the Column Preparation Solution to each miniprep column and centrifuge at ≥ 12,000 x g for 30 seconds to 1 minute </li>
 +
<li> Discard the flow-through liquid </li>
 +
</ol>
 
5. Load cleared lysate
 
5. Load cleared lysate
a. Transfer the cleared lysate from step 3 to the column prepared in step 4 and centrifuge at ≥ 12,000 x g for 30 seconds to 1 minute.
+
<ol type="a">
b. Discard the flow-through liquid
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<li> Transfer the cleared lysate from step 3 to the column prepared in step 4 and centrifuge at ≥ 12,000 x g for 30 seconds to 1 minute. </li>
 +
<li> Discard the flow-through liquid </li>
 +
</ol>
 
6. Wash Column (verify that ethanol has been added to the bottle of Wash Solution 2)
 
6. Wash Column (verify that ethanol has been added to the bottle of Wash Solution 2)
a. Add 750 µL of the diluted Wash Solution to the column
+
<ol type="a">
b. Centrifuge at ≥ 12,000 x g for 30 seconds to 1 minute
+
<li> Add 750 µL of the diluted Wash Solution to the column </li>
c. Discard the flow-through liquid and centrifuge again at maximum speed for 1-2 minutes without any additional Wash Solution to remove excess ethanol
+
<li> Centrifuge at ≥ 12,000 x g for 30 seconds to 1 minute </li>
 +
<li> Discard the flow-through liquid and centrifuge again at maximum speed for 1-2 minutes without any additional Wash Solution to remove excess ethanol </li>
 +
</ol>
 
7. Elute DNA
 
7. Elute DNA
a. Transfer the column to a fresh collection tube. Add 100 µL of Elution Solution or molecular biology reagent water to the column
+
<ol type="a">
b. For DNA sequencing and other enzymatic application, use water or 5 Mm Tris-HCL, Ph 8.0, as an eluant
+
<li> Transfer the column to a fresh collection tube. Add 100 µL of Elution Solution or molecular biology reagent water to the column </li>
c. Centrifuge at ≥ 12,000 x g for 1 minute
+
<li> For DNA sequencing and other enzymatic application, use water or 5 Mm Tris-HCL, Ph 8.0, as an eluant </li>
d. Use immediately or store at -20˚C
+
<li> Centrifuge at ≥ 12,000 x g for 1 minute </li>
 +
<li> Use immediately or store at -20˚C </li>
 +
</ol>
 
</p>
 
</p>
  

Revision as of 00:38, 22 September 2017