Difference between revisions of "Team:UChicago/Results"

 
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<h1>Solution</h1>
 
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  We will identify the minimal, essential region of the Pichia centromere that, when incorporated into a plasmid backbone, will allow the plasmid to mimic a Pichia chromosome during replication. This region can then be incorporated into Pichia backbones to convert them into centromere plasmids, which transform with high efficiency, have low and constant copy numbers, and are stably maintained without integration. Ultimately, we will contribute an important foundational tool for flexible, creative, and impactful cloning in yeast. If successful, the centromeric plasmids will serve a multitude of purposes in the bioengineering and industrial fields.
 
 
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Our team has already made significant strides towards creating the proposed centromeric plasmid vector. We have transformed psB1C3mut into competent E. coli and grown the cultures in LB + CAM plates and liquid media. We similarly transformed psD000 into E. coli as well, along with <i>Pichia pastors</i> (which we grew up in drop-out arginine plates). <br><br>
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Additionally, we have amplified five potential centromeric regions in total from the chromosomal DNA of <i>Pichia pastors</i>.<br><br>
 
  
Our team has already made significant strides towards creating the proposed centromeric plasmid vector. We have grown psB1C3mut in LB+CAM (chloramphenicol), psD000 in LB+CAM and drop-out arginine plates and psD001 in LB+CAM. Additionally, we have amplified five potential centromeric regions in total from the chromosomal DNA of <i>Pichia pastors</i>.<br><br>
 
  
We PCRd yEmRFP from a plasmid in the Glick lab (pOW1-yEmRFP) and ligated it into psD000. In the future, we must sequence psD001 and attempt to grow it in yeast on -Arg plates. <br><br>
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Although GeneHackers has made significant progress in our experiment, we still have some parts of our experiment that have not been achieved yet. We need to Gibson assembly various chromosomal sequences into psD001and perform assays of this plasmid in <i>Pichia pastors</i>. Furthermore, if we are successful in creating the centromeric plasmid, we hope to incorporate the plasmid within the bioengineering and the industrial fields. Here, we want to test the efficiency and practicality of our plasmid within human environments. After these rounds of experimentation, we want to come back to the laboratory and improve our research with this plasmid. Hopefully, we will be able to work toward a final centromeric plasmid that will improve the course of scientific research.<br><br>
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<h1>Results</h1>
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<div class="paragraph">
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Our team has already made significant strides towards creating the proposed centromeric plasmid vector. We have transformed psB1C3mut into competent E. coli and grown the cultures in LB + CAM plates and liquid media. We similarly transformed psD000 into E. coli as well, along with <i>Pichia pastoris</i> (which we grew up in drop-out arginine plates). <br><br>
  
 +
Additionally, we have amplified five potential centromeric regions in total from the chromosomal DNA of <i>Pichia pastoris</i>.<br><br>
 +
 +
Our team has already made significant strides towards creating the proposed centromeric plasmid vector. We have grown psB1C3mut in LB+CAM (chloramphenicol), psD000 in LB+CAM and drop-out arginine plates and psD001 in LB+CAM. Additionally, we have amplified five potential centromeric regions in total from the chromosomal DNA of <i>Pichia pastoris</i>.<br><br>
 +
 +
We PCRd yEmRFP from a plasmid in the Glick lab (pOW1-yEmRFP) and ligated it into psD000. In the future, we must sequence psD001 and attempt to grow it in yeast on -Arg plates.
 +
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 +
<h1>Future</h1>
 +
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Although GeneHackers has made significant progress in our experiment, we still have some parts of our experiment that have not been achieved yet. We need to Gibson assembly various chromosomal sequences into psD001and perform assays of this plasmid in <i>Pichia pastoris</i>. Furthermore, if we are successful in creating the centromeric plasmid, we hope to incorporate the plasmid within the bioengineering and the industrial fields. Here, we want to test the efficiency and practicality of our plasmid within human environments. After these rounds of experimentation, we want to come back to the laboratory and improve our research with this plasmid. Hopefully, we will be able to work toward a final centromeric plasmid that will improve the course of scientific research.
 
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<a href="mailto:genehackers.uchicago@gmail.com">GeneHackers 2017</a>
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Latest revision as of 03:31, 1 November 2017

Results

Our team has already made significant strides towards creating the proposed centromeric plasmid vector. We have transformed psB1C3mut into competent E. coli and grown the cultures in LB + CAM plates and liquid media. We similarly transformed psD000 into E. coli as well, along with Pichia pastoris (which we grew up in drop-out arginine plates).

Additionally, we have amplified five potential centromeric regions in total from the chromosomal DNA of Pichia pastoris.

Our team has already made significant strides towards creating the proposed centromeric plasmid vector. We have grown psB1C3mut in LB+CAM (chloramphenicol), psD000 in LB+CAM and drop-out arginine plates and psD001 in LB+CAM. Additionally, we have amplified five potential centromeric regions in total from the chromosomal DNA of Pichia pastoris.

We PCRd yEmRFP from a plasmid in the Glick lab (pOW1-yEmRFP) and ligated it into psD000. In the future, we must sequence psD001 and attempt to grow it in yeast on -Arg plates.

Future

Although GeneHackers has made significant progress in our experiment, we still have some parts of our experiment that have not been achieved yet. We need to Gibson assembly various chromosomal sequences into psD001and perform assays of this plasmid in Pichia pastoris. Furthermore, if we are successful in creating the centromeric plasmid, we hope to incorporate the plasmid within the bioengineering and the industrial fields. Here, we want to test the efficiency and practicality of our plasmid within human environments. After these rounds of experimentation, we want to come back to the laboratory and improve our research with this plasmid. Hopefully, we will be able to work toward a final centromeric plasmid that will improve the course of scientific research.