Difference between revisions of "Team:SHSBNU China/Improve"

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             <div class="entry" style="opacity: 0.95;">
 
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                 <p style = "font-family:arial;color:#444444;font-size:32px; text-align: center"> Improvement</p>
 
                 <p style = "font-family:arial;color:#444444;font-size:32px; text-align: center"> Improvement</p>
                 <p>Before our marine <i>Shewanella baltica</i> TtrS/R (<a href="http://parts.igem.org/Part:BBa_K2507013" style = "opacity: 1;">BBa_K2507013</a>, <a href="http://parts.igem.org/Part:BBa_K2507014" style = "opacity: 1;">BBa_K2507014</a>,<a href="http://parts.igem.org/Part:BBa_K2507015" style = "opacity: 1;">BBa_K2507015</a>,<a href="http://parts.igem.org/Part:BBa_K2507016" style = "opacity: 1;">BBa_K2507016</a>,<a href="http://parts.igem.org/Part:BBa_K2507017" style = "opacity: 1;">BBa_K2507017</a>) system, the only known genetically encoded tetrathionate sensor is the <i>Salmonella typhimurium</i> TtrSR two-component system (TCS) (Hensel et al, 1999; Price-Carter et al, 2001). However, they found <i>S.typhimurium’s</i> promoter PttrB is repressed by oxygen and nitrate via the global regulator Nitrate Reductase Regulator (FNR). While the oxygen levels in the intestinal are poorly understood by human beings Kristina et al think the oxygen level maybe relatively high near the epithelial mucosal boundary because of near to the blood. Meanwhile, nitrate levels in intestinal have been shown to be improved during inflammation (Winter et al, 2013). In iGEM 2012, Dundee used <i>Salmonella</i> TtrSR system  <a href="http://parts.igem.org/Part:BBa_K895007" style = "opacity: 1;">BBa_K895007</a> and the system works well.</p>
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                 <p>Before our marine <i>Shewanella baltica</i> TtrS/R (<a href="http://parts.igem.org/Part:BBa_K2507013" style = "opacity: 1;">BBa_K2507013</a>, <a href="http://parts.igem.org/Part:BBa_K2507014" style = "opacity: 1;">BBa_K2507014</a>, <a href="http://parts.igem.org/Part:BBa_K2507015" style = "opacity: 1;">BBa_K2507015</a>, <a href="http://parts.igem.org/Part:BBa_K2507016" style = "opacity: 1;">BBa_K2507016</a>, <a href="http://parts.igem.org/Part:BBa_K2507017" style = "opacity: 1;">BBa_K2507017</a>) system, the only known genetically encoded tetrathionate sensor is the <i>Salmonella typhimurium</i> TtrSR two-component system (TCS) (Hensel et al, 1999; Price-Carter et al, 2001). However, they found <i>S.typhimurium’s</i> promoter PttrB is repressed by oxygen and nitrate via the global regulator Nitrate Reductase Regulator (FNR). While the oxygen levels in the intestinal are poorly understood by human beings Kristina et al think the oxygen level maybe relatively high near the epithelial mucosal boundary because of near to the blood. Meanwhile, nitrate levels in intestinal have been shown to be improved during inflammation (Winter et al, 2013). In iGEM 2012, Dundee used <i>Salmonella</i> TtrSR system  <a href="http://parts.igem.org/Part:BBa_K895007" style = "opacity: 1;">BBa_K895007</a> and the system works well.</p>
 
                 <P>The sensor we use <i>S.baltica</i> TtrSR which is only weakly repressed by oxygen and not repressed by nitrate in <i>E. coli.</i> And our <i>S.baltica</i> TtrSR system can work well using protoviolaceinic acid as the reporter, which display dark-green color. And our system could also work poorly using sfGFP as the reporter.</P>
 
                 <P>The sensor we use <i>S.baltica</i> TtrSR which is only weakly repressed by oxygen and not repressed by nitrate in <i>E. coli.</i> And our <i>S.baltica</i> TtrSR system can work well using protoviolaceinic acid as the reporter, which display dark-green color. And our system could also work poorly using sfGFP as the reporter.</P>
 
                 <img src="https://static.igem.org/mediawiki/2017/7/79/SHSBNU_17_12a00.jpg" style=""/>
 
                 <img src="https://static.igem.org/mediawiki/2017/7/79/SHSBNU_17_12a00.jpg" style=""/>

Revision as of 15:47, 1 November 2017

SHSBNU-China iGEM 2017 Home Page

Improvement

Before our marine Shewanella baltica TtrS/R (BBa_K2507013, BBa_K2507014, BBa_K2507015, BBa_K2507016, BBa_K2507017) system, the only known genetically encoded tetrathionate sensor is the Salmonella typhimurium TtrSR two-component system (TCS) (Hensel et al, 1999; Price-Carter et al, 2001). However, they found S.typhimurium’s promoter PttrB is repressed by oxygen and nitrate via the global regulator Nitrate Reductase Regulator (FNR). While the oxygen levels in the intestinal are poorly understood by human beings Kristina et al think the oxygen level maybe relatively high near the epithelial mucosal boundary because of near to the blood. Meanwhile, nitrate levels in intestinal have been shown to be improved during inflammation (Winter et al, 2013). In iGEM 2012, Dundee used Salmonella TtrSR system BBa_K895007 and the system works well.

The sensor we use S.baltica TtrSR which is only weakly repressed by oxygen and not repressed by nitrate in E. coli. And our S.baltica TtrSR system can work well using protoviolaceinic acid as the reporter, which display dark-green color. And our system could also work poorly using sfGFP as the reporter.

Figure1. Schematic diagram of ligand-induced signaling through TtrS/R and plasmid-borne implementation of the sensor components. We combine BBa_ K2507006 with BBa_K2507017.

Figure2. Overnight cultures of E. coli Top10 overexpressing vioABDE, producing protoviolaceinic acid in different tetrathionate concentration.