Difference between revisions of "Team:LUBBOCK TTU"

 
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{{Team:LUBBOCK_TTU/test2}}
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{{LUBBOCK_TTU/fontawesome/css/font-awesome-ie7.css}}
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{{LUBBOCK_TTU/fontawesome/css/font-awesome-ie7.min.css}}
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{{LUBBOCK_TTU/fontawesome/css/font-awesome.css}}
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{{LUBBOCK_TTU/fontawesome/css/font-awesome.min.css}}
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{{LUBBOCK_TTU/navi}}
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{{LUBBOCK_TTU/imagehover}}
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{{LUBBOCK_TTU/linkcolors}}
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<html>
 
<html>
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<meta name="viewport" content="width=device-width, initial-scale=1">
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<link rel="stylesheet" href="https://www.w3schools.com/w3css/4/w3.css">
  
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<head>  
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<!-- Font Awesome -->
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<link href='https://fonts.googleapis.com/css?family=Roboto+Slab' rel='stylesheet' type='text/css'>
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<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/4.7.0/css/font-awesome.min.css">
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<link href='https://fonts.googleapis.com/css?family=Raleway' rel='stylesheet' type='text/css'>
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<!-- End Font Awesome -->
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<link rel="stylesheet" href="http://code.jquery.com/ui/1.11.1/themes/smoothness/jquery-ui.css">
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<!-- Bootstrap Grid Basic -->
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<link rel="stylesheet" href="https://2014.igem.org/Team:Imperial/Resources/CSS:wiki?action=raw&ctype=text/css">
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  <link rel="stylesheet" href="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.7/css/bootstrap.min.css">
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</head>
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  <script src="https://ajax.googleapis.com/ajax/libs/jquery/3.2.1/jquery.min.js"></script>
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  <script src="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.7/js/bootstrap.min.js"></script>
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<!-- End Bootstrap Grid Basic -->
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<!--DEFAULT WIKI SETTINGS-->
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<style> /* Clear the default wiki settings */
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#home_logo, #sideMenu { display:none; }
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#sideMenu, #top_title, .patrollink  {display:none;}
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#content { width:100%; padding:0px;  margin-top:1px; margin-left:0px;}
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body {background-color:white; }
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#bodyContent h1, #bodyContent h2, #bodyContent h3, #bodyContent h4, #bodyContent h5 { margin-bottom: 0px; }
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</style>
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<!-- FOOTER CSS -->
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<style>
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/**
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* Demo Styles
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*/
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html {
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  height: 100%;
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  box-sizing: border-box;
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}
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*,
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*:before,
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*:after {
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  box-sizing: inherit;
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}
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body {
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  position: relative;
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  margin: 0;
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  <!--padding-bottom: 6rem;-->
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  min-height: 100%;
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}
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/**
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* Footer Styles
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*/
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.footer {
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  position: absolute;
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  right: 0;
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  bottom: -900;
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  left: 0;
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  padding: 1rem;
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  background-color: #fff;
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  text-align: center;
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}
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</style>
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<!-- END FOOTER CSS -->
  
 
<body>
 
<body>
  
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<nav id="navigation" class="site-navigation" role="navigation">
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<!-- HEADER -->
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<ul class="menu">
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<div style="background-image: url(https://static.igem.org/mediawiki/2017/9/9e/Lubbock_TTU_header.png);>
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<li class="menu-item"><a href="LINK">    Awards    </a>
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<p align="center><font face="Arial" size="6" color="white">
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        <ul class="dropdown">
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<center>
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Applied_Design">Applied Design</a></li>
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<div style="line-height:200%;">
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Entrepreneurship">Entrepreneurship</a></li>
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    <br>
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Hardware">Hardware</a></li>
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</div>
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Measurement">Measurement</a></li>
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<i class="fa fa-flask" style="font-size:px;color:white;"></i></br>Characterization of a Calcium-Sensitive Reporter in</br><i>Saccharomyces cerevisiae</i></br></br></center></font></p>
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Model">Model</a></li>
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</div>
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Plant">Plant</a></li>
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<!-- END HEADER-->
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Software">Software</a></li>
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        </ul></li>
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<li class="menu-item"><a href="LINK">    Human Practices    </a>
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        <ul class="dropdown">
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/HP/Silver">Silver HP</a></li>
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/HP/Gold_Integrated">Integrated & Gold</a></li>
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Engagement">Public Engagement</a></li>
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        </ul></li>
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<li class="menu-item"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Safety">    Safety    </a></li>
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<li class="menu-item"><a href="">    Parts    </a>
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        <ul class="dropdown">
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Parts">Parts</a></li>
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Basic_Part">Basic Parts</a></li>
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Composite_Part">Composite Parts</a></li>
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Part_Collection">Part Collection</a></li>
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        </ul></li>
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<li class="menu-item"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Notebook">    Notebook    </a></li>
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<li class="menu-item"><a href="">    Project  Info  </a>
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        <ul class="dropdown">
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Description">Description
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Design">Design</a></li>
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Experiments">Experiments</a></li>
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/InterLab">InterLab</a></li>
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Contribution">Contribution</a></li>
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Model">Model</a></li>
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Results">Results</a></li>
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Demonstrate">Demonstrate</a></li>
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Improve">Improve</a></li>
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        <li class="menu-item sub-menu"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Attributions">Attributions</a></li>
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        </ul></li>
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<li class="menu-item"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Collaborations">    Collaborations    </a></li>
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<li class="menu-item"><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Team">    Meet the Team    </a></li>
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<li class="menu-item"><a href="https://2017.igem.org/Team:LUBBOCK_TTU">    Home    </a></li>
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</nav>
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<br>
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<br>
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<p>
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<!-- end of menu -->
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<div class="container"><!-- For NAVI -->
  
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<div class="column full_size" >
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<!-- PROJECT DESCRIPTION -->
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<h1> Welcome to iGEM 2017! </h1>
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<div style="background-color:#fff; overflow: hidden;">
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<p>Your team has been approved and you are ready to start the iGEM season! </p>
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<div class="col-sm-12">
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</div>  
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</br></br>
 +
<font face="Arial" size="6"><center>Project Description</center></font><hr>
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</br><font face="Arial" size="4">
  
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<div class="clear"></div>
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  <div class="row">
 +
    <div class="col-sm-6"><font face="Arial" size="4">Our current work was inspired by the ability of a thermosensitive ion channel, known as TRPV1, to import calcium into the cell in response to temperature changes. This process could one day be used to provide a method of <i>In-Silico</i> control of genetic circuits in synthetic biology. Our project explores the characterization of a calcium-sensitive reporter in <i>Saccharomyces cerevisiae</i> to monitor gene expression levels within a range of temperatures.
 +
</br></br><center><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Description">Learn more &#8594;</a></center></font></div>
 +
    <div class="col-sm-6">
 +
<video width="450" height="300" controls><source src="https://static.igem.org/mediawiki/2017/1/10/Lubbock_TTU_animation.mp4" type="video/mp4"></video>
 +
  </div></br>
  
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<div class="column full_size" >
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</font></br>
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<h5>Before you start: </h5>
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</div><!-- end col-sm-10 -->
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<p> Please read the following pages:</p>
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<ul>
+
−
<li>  <a href="https://2017.igem.org/Competition">Competition Hub</a> </li>
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−
<li> <a href="https://2017.igem.org/Competition/Deliverables/Wiki">Wiki Requirements page</a></li>
+
−
<li> <a href="https://2017.igem.org/Resources/Template_Documentation">Template documentation</a></li>
+
−
</ul>
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</div>
 
</div>
  
−
<div class="column full_size" >
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</div>
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<div class="highlight">
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<!-- END PROJECT DESCRIPTION -->
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<h5> Styling your wiki </h5>
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−
<p>You may style this page as you like or you can simply leave the style as it is. You can easily keep the styling and edit the content of these default wiki pages with your project information and completely fulfill the requirement to document your project.</p>
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<!-- HP -->
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<p>While you may not win Best Wiki with this styling, your team is still eligible for all other awards. This default wiki meets the requirements, it improves navigability and ease of use for visitors, and you should not feel it is necessary to style beyond what has been provided.</p>  
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<div style="background-color:#fff; overflow: auto;" class="clear_fix">
 +
<div class="col-sm-12">
 +
</br></br>
 +
<font face="Arial" size="6"><center>Human Practices</center></font><hr>
 +
</br><font face="Arial" size="4">Human Practices is an integral part of creating impactful relationships with our community, and conducting research that is embraced by a generalized audience. The iGEM competition is centered around synthetic biology, of which includes genetic engineering, which traditionally has been a controversial area of research. Careful consideration of Human Practices ensures that our research is ethical, responsible, safe, secure, and sustainable.
 +
 
 +
</br></br><center><a href="https://2017.igem.org/Team:LUBBOCK_TTU/HP/Silver">Learn more &#8594;</a>
 +
</font></br></br></br>
 
</div>
 
</div>
 
</div>
 
</div>
 +
<!-- END HP -->
  
−
<div class="column full_size" >
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<!-- INTERLAB -->
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<h5> Wiki template information </h5>
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<div style="background-color:#fff; overflow: auto;" class="clear_fix">
−
<p>We have created these wiki template pages to help you get started and to help you think about how your team will be evaluated. You can find a list of all the pages tied to awards here at the <a href="https://2017.igem.org/Judging/Pages_for_Awards">Pages for awards</a> link. You must edit these pages to be evaluated for medals and awards, but ultimately the design, layout, style and all other elements of your team wiki is up to you!</p>
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<div class="col-sm-12">
−
</div>
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<font face="Arial" size="6"><center>InterLab Study</center></font><hr>
 +
</br><font face="Arial" size="4">The iGEM Measurement Committee aims to develop robust measurement procedures for enhancing the quantification and reproducibility of results through the InterLab Study. The objective of the 2017 InterLab Study is to determine absolute units for measuring green fluorescent protein (GFP) that are easily comparable regardless of the type of plate reader used to make the measurement. We used a standardized protocol and analysis method for measuring GFP with a BioTek Synergy 4 plate reader.
  
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<div class="column full_size" >
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</br></br><center><a href="https://2017.igem.org/Team:LUBBOCK_TTU/InterLab">View 2017 InterLab Study results &#8594;</a></center></font></br></br>
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<h5> Editing your wiki </h5>
+
−
<p>On this page you can document your project, introduce your team members, document your progress and share your iGEM experience with the rest of the world! </p>  
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−
<p> <a href="https://2017.igem.org/wiki/index.php?title=Team:Example&action=edit"> </a>Use WikiTools - Edit in the black menu bar to edit this page</p>
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</div>
 
</div>
 +
</div>
 +
<!-- END INTELRAB -->
  
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<div class="column full_size" >
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<!-- ABOUT US -->
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<h5>Tips</h5>
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<div class="container-fluid">
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<p>This wiki will be your team’s first interaction with the rest of the world, so here are a few tips to help you get started: </p>
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</br>
−
<ul>
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  <div class="row">
−
<li>State your accomplishments! Tell people what you have achieved from the start. </li>
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<div class="col-sm-5"><font face="Arial" size="6">About Us</font><hr></br><font face="Arial" size="4">The Lubbock_TTU Team is part of a student organization at Texas Tech University known as iGEM Raiders. This year, the Lubbock_TTU team is composed of 10 undergraduate and graduate students.</br></br><center><a href="https://2017.igem.org/Team:LUBBOCK_TTU/Team">Meet the Team &#8594;</a></center></font></div>
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<li>Be clear about what you are doing and how you plan to do this.</li>
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<div class="col-sm-1"></div>
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<li>You have a global audience! Consider the different backgrounds that your users come from.</li>
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<div class="col-sm-4"><img src="https://static.igem.org/mediawiki/2017/8/80/Lubbock_TTU_teamphoto.jpg" width="450px"></div>
−
<li>Make sure information is easy to find; nothing should be more than 3 clicks away.  </li>
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<div class="col-sm-1"></div>
−
<li>Avoid using very small fonts and low contrast colors; information should be easy to read.  </li>
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  </div></br></br></br>
−
<li>Start documenting your project as early as possible; don’t leave anything to the last minute before the Wiki Freeze. For a complete list of deadlines visit the <a href="https://2017.igem.org/Calendar">iGEM 2017 calendar</a> </li>
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−
<li>Have lots of fun! </li>
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−
</ul>  
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</div>
 
</div>
 +
<!-- END ABOUT US -->
  
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<div class="column full_size" >
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<!-- COLLABS -->
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<h5>Inspiration</h5>
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<div class="col-sm-12"><font face="Arial" size="6"><center>Collaborations</center></font><hr></div>
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<p> You can also view other team wikis for inspiration! Here are some examples:</p>
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<ul>
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<div class="col-sm-4">
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<li> <a href="https://2014.igem.org/Team:SDU-Denmark/"> 2014 SDU Denmark </a> </li>
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<div class="hover11 column">
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<li> <a href="https://2014.igem.org/Team:Aalto-Helsinki">2014 Aalto-Helsinki</a> </li>
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<a href="https://2017.igem.org/Team:LUBBOCK_TTU/Collaborations"><figure><img src="https://static.igem.org/mediawiki/2017/9/90/Lubbock_TTU_collaborations.jpg" width="230" height="230"></figure></a>
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<li> <a href="https://2014.igem.org/Team:LMU-Munich">2014 LMU-Munich</a> </li>
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</div>
−
<li> <a href="https://2014.igem.org/Team:Michigan"> 2014 Michigan</a></li>
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−
<li> <a href="https://2014.igem.org/Team:ITESM-Guadalajara">2014 ITESM-Guadalajara </a></li>
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−
<li> <a href="https://2014.igem.org/Team:SCU-China"> 2014 SCU-China </a></li>
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−
</ul>
+
 
</div>
 
</div>
  
−
<div class="column full_size" >
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<div class="col-sm-4">
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<h5> Uploading pictures and files </h5>
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<div class="hover11 column">
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<p> You can upload your pictures and files to the iGEM 2017 server. Remember to keep all your pictures and files within your team's namespace or at least include your team's name in the file name. <br />
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<a href="https://2017.igem.org/Team:LUBBOCK_TTU/Collaborations"><figure><img src="https://www.tacc.utexas.edu/documents/1084364/1085221/utaustin-seal.png/2254124a-1d13-44cc-8e3f-6d925af2391d?t=1412720755000" width="230" height="230"></figure></a>
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When you upload, set the "Destination Filename" to <br><code>T--YourOfficialTeamName--NameOfFile.jpg</code>. (If you don't do this, someone else might upload a different file with the same "Destination Filename", and your file would be erased!)<br><br>
+
</div>
 +
</div>
  
−
<a href="https://2017.igem.org/Special:Upload">
+
<div class="col-sm-4">
−
UPLOAD FILES
+
<div class="hover11 column">
−
</a>
+
<a href="https://2017.igem.org/Team:LUBBOCK_TTU/Collaborations"><figure><img src="https://static.igem.org/mediawiki/2017/thumb/1/17/T--Erlangen_Nuremberg--Logo.png/240px-T--Erlangen_Nuremberg--Logo.png" width="230" height="230"></figure></a>
−
</p>
+
</div>
 
</div>
 
</div>
 +
<!-- END COLLABS -->
  
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</br>
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</div> <!-- /container --><!-- end of for NAVI -->
 +
 
 +
<!-- QL -->
 +
<style>
 +
.btn-group button {
 +
    background-color: #cc3d3d; /* Green #4CAF50 background */
 +
    border: 1px solid #cc3d3d; /* Border color */
 +
    color: white; /* White text */
 +
    padding: 10px 24px; /* Some padding */
 +
    cursor: pointer; /* Pointer/hand icon */
 +
    float: left; /* Float the buttons side by side */
 +
}
 +
 
 +
/* Clear floats (clearfix hack) */
 +
.btn-group:after {
 +
    content: "";
 +
    clear: both;
 +
    display: table;
 +
}
 +
 
 +
.btn-group button:not(:last-child) {
 +
    border-right: none; /* Prevent double borders */
 +
}
 +
 
 +
/* Add a background color #3e8e41 on hover */
 +
.btn-group button:hover {
 +
    background-color: #b23535;
 +
}
 +
</style>
 +
 
 +
<div class="btn-group" style="width:100%">
 +
  <a href="https://2017.igem.org/Team:LUBBOCK_TTU/Notebook"><button style="width:25%"><i class="fa fa-book" style="font-size:45px;color:;"></i></br>Notebook</button></a>
 +
  <a href="https://2017.igem.org/Team:LUBBOCK_TTU/Part_Collection"><button style="width:25%"><i class="fa fa-cogs" style="font-size:45px;color:;"></i></br>Parts</button></a>
 +
  <a href="https://2017.igem.org/Team:LUBBOCK_TTU/Safety"><button style="width:25%"><i class="fa fa-medkit" style="font-size:45px;color:;"></i></br>Safety</button></a>
 +
  <a href="https://2017.igem.org/Team:LUBBOCK_TTU/Engagement"><button style="width:25%"><i class="fa fa-spinner" style="font-size:45px;color:;"></i></br>Public Engagement</button></a>
 +
</div>
 +
<!-- END OF QL -->
 +
 
 +
<!-- SPONSORS -->
 +
<style>
 +
.btn-group2 button {
 +
    background-color: #b7b7b7; /* Background */
 +
    border: 1px solid #b7b7b7; /* Border color */
 +
    color: white; /* Text color */
 +
    padding: 10px 24px; /* Some padding */
 +
    float: left; /* Float the buttons side by side */
 +
}
 +
 
 +
/* Clear floats (clearfix hack) */
 +
.btn-group2:after {
 +
    content: "";
 +
    clear: both;
 +
    display: table;
 +
}
 +
 
 +
.btn-group2 button:not(:last-child) {
 +
    border-right: none; /* Prevent double borders */
 +
}
 +
</style>
 +
 
 +
<center>
 +
<div class="btn-group2" style="width:100%">
 +
<button style="width:100%"">
 +
<div style="line-height:120%;">
 +
 
 +
<!--<div class="col col-sm-12"><font face="Arial" size="6"></br>Our Sponsors</font></div>-->
 +
 
 +
<div class="col col-sm-3"></br></br><img src="https://static.igem.org/mediawiki/2017/e/e4/Lubbock_TTU_artsandsciences.png" width="230"></div>
 +
<div class="col col-sm-3"></br></br><img src="https://static.igem.org/mediawiki/2016/5/51/Muc16_Sponsor_IDT.png" width="200"></div>
 +
<div class="col col-sm-3"></br></br><img src="https://static.igem.org/mediawiki/2014/5/5a/York_Genscript_logo-1-.png" width="200"></div>
 +
<div class="col col-sm-3"><img src="https://static.igem.org/mediawiki/2016/a/ad/T--Lubbock_TTU--ulabs.png" height="150"></div>
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Latest revision as of 17:38, 12 December 2017



Characterization of a Calcium-Sensitive Reporter in
Saccharomyces cerevisiae



Project Description

Our current work was inspired by the ability of a thermosensitive ion channel, known as TRPV1, to import calcium into the cell in response to temperature changes. This process could one day be used to provide a method of In-Silico control of genetic circuits in synthetic biology. Our project explores the characterization of a calcium-sensitive reporter in Saccharomyces cerevisiae to monitor gene expression levels within a range of temperatures.

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Human Practices

Human Practices is an integral part of creating impactful relationships with our community, and conducting research that is embraced by a generalized audience. The iGEM competition is centered around synthetic biology, of which includes genetic engineering, which traditionally has been a controversial area of research. Careful consideration of Human Practices ensures that our research is ethical, responsible, safe, secure, and sustainable.

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InterLab Study

The iGEM Measurement Committee aims to develop robust measurement procedures for enhancing the quantification and reproducibility of results through the InterLab Study. The objective of the 2017 InterLab Study is to determine absolute units for measuring green fluorescent protein (GFP) that are easily comparable regardless of the type of plate reader used to make the measurement. We used a standardized protocol and analysis method for measuring GFP with a BioTek Synergy 4 plate reader.

View 2017 InterLab Study results →



About Us

The Lubbock_TTU Team is part of a student organization at Texas Tech University known as iGEM Raiders. This year, the Lubbock_TTU team is composed of 10 undergraduate and graduate students.

Meet the Team →



Collaborations
© 2017 Lubbock_TTU