Difference between revisions of "Team:UCSC/Safety"

 
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<h1>SAFETY</h1>
 
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   <p><span class="firstword">When</span> choosing an organism to help us produce acetaminophen and vitamin B<sub>12</sub> we sought out an FDA-approved microbe; however, we resorted to using a non-toxic cyanobacteria as a model for spirulina. Spirulina is generally recognized as safe organism and our genes were chosen from bio-safety level 1 (BSL-1) organisms.</p>
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   <p><span class="firstword">When</span> choosing an organism to help us produce acetaminophen and vitamin B<sub>12</sub> we sought out an FDA-approved microbe; however, we resorted to using a non-toxic cyanobacteria, <i>Synechococcus elongatus</i> strain PCC 7942, as a model for <i>Arthrospira platensis</i>. <i>A. platensis</i> is a generally recognized as safe organism and our genes were chosen from bio-safety level 1 (BSL-1) organisms.</p>
  
  
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<p>We are growing two different strains of <i>S. elongatus</i>: 7002 and 7942. While PCC 7942 will act as our host organism due to its metabolic similarity to <i>A. platensis</i>, we plan to use PCC 7002, which requires external B<sub>12</sub> for survival, as a growth reference for the detection of vitamin B<sub>12</sub>. PCC 7942 was obtained from the University of California, San Diego (UCSD) iGEM team and PCC 7002 was obtained from Dr. Donald Bryant at Pennsylvania State University.</p>
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<!--<p>We are growing two different strains of <i>S. elongatus</i>: 7002 and 7942. While PCC 7942 will act as our host organism due to its metabolic similarity to <i>A. platensis</i>, we plan to use PCC 7002, which requires external B<sub>12</sub> for survival, as a growth reference for the detection of vitamin B<sub>12</sub>. PCC 7942 was obtained from the University of California, San Diego (UCSD) iGEM team and PCC 7002 was obtained from Dr. Donald Bryant at Pennsylvania State University.</p>-->
 
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<h3>VITAMIN B<sub>12</sub></h3>
 
<h3>VITAMIN B<sub>12</sub></h3>

Latest revision as of 23:58, 1 November 2017


http://freevector.co/vector-icons/fashion/protection-gloves.html

SAFETY



When choosing an organism to help us produce acetaminophen and vitamin B12 we sought out an FDA-approved microbe; however, we resorted to using a non-toxic cyanobacteria, Synechococcus elongatus strain PCC 7942, as a model for Arthrospira platensis. A. platensis is a generally recognized as safe organism and our genes were chosen from bio-safety level 1 (BSL-1) organisms.

L A B SAFETY






Proper PPE for BSL-1 organisms are worn in our laboratory. Within the lab space, every person is expected to be wearing gloves, long pants, close-toed shoes, a lab coat, and protective goggles. All personnel also must be accompanied with one other person so that there is no one alone in lab.





P R O J E C T SAFETY


VITAMIN B12


G E N E S U S E D:


I. ssuE --> produces FMN reductase

Organism: Synechoccocous elongatus strain PCC 7002
Biosafety Level I

The synthesis of 5,6-DMB first requires the presence of reduced flavin mononucleotide (FMNH2). FMNH2 is reduced from flavin mononucleotide (FMN) by FMN reductase, which is encoded with the ssuE gene[19,20].

FMNH2 + NADP+ = FMN + NADPH

II. bluB --> 5,6-DMB synthase

Organism: Sinorhizobium meliloti 1021
Biosafety Level I



ACETAMINOPHEN


G E N E S U S E D:


I. 4ABH --> 4-aminophenol

Organism: Agaricus bisporus
Biosafety Level I

II. nhoA --> converts 4-aminophenol into acetaminophen

Organism: Escherichia coli
Biosafety Level I




  • [19] R. Caspi, T. Altman, J. M. Dale, K. Dreher, C. A. Fulcher, F. Gilham, P. Kaipa, A. S. Karthikeyan, A. Kothari, M. Krummenacker, M. Latendresse, L. A. Mueller, S. Paley, L. Popescu, A. Pujar, A. G. Shearer, P. Zhang, and P. D. Karp, “The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases,” Nucleic Acids Research, vol. 38, pp. D473–D479, Jan. 2010.
  • [20] “ssuE - FMN reductase (NADPH) - Escherichia coli (strain K12) - ssuE gene & protein.”