Team:Evry Paris-Saclay/Basic Part

IGEM Evry Paris-Saclay



Basic Parts


During this project, our team designed the following basic BioBricks:

Coding sequences:

Part number Name Submitted to the registry Improves the function of an existing BioBrick Part
BBa_K2448001 mEmerald yes
BBa_K2448003 LacZ-alpha (pUC19 like)
BBa_K2448004 mCherry yes Yes of Part:BBa_J06504
BBa_K2448006 PsiR from Agrobacterium tumefaciens
BBa_K2448007 PsiR from Sinorhizobium fredii
BBa_K2448008 PsiR from Sinorhizobium meliloti
BBa_K2448009 FruR from Escherichia coli
BBa_K2448021 D-Psicose 3-epimerase (Dpe) from Clostridium cellulolyticum
BBa_K2448022 D-Psicose 3-epimerase (Dpe) from Agrobacterium tumefaciens

Plasmid backbones:

Part number Name Submitted to the registry Improves the function of an existing BioBrick Part
BBa_K2448036 pSB1C3 BsmBI free yes Yes of Part:pSB1C3
BBa_K2448037 pSB3K3 BsaI free yes Yes of Part:pSB3K3
BBa_K2448038 pSB1C3 LacIq yes Yes of Part:pSB1C3

Ribosomal binding sites (RBS):

Part number Name Submitted to the registry Improves the function of an existing BioBrick Part
BBa_K2448000 B0034 with scars AGGA and AGATCA
BBa_K2448002 B0034 like RBS with scars AATT and CAGCT
BBa_K2448020 B0034 with scars TAC and CAT
BBa_K2448039 B0034 with scars GTAC and TACCAT
BBa_K2448049 B0034 with scars GTAC and CTCGAGg
BBa_K2448019 RBS (pET like)

Promoters:

Part number Name Submitted to the registry Improves the function of an existing BioBrick Part
BBa_K2448016 pPsiTac1 Yes of Part:BBa_K864400
BBa_K2448050 pPsiTac2 Yes of Part:BBa_K864400
BBa_K2448010 pPsiA from Agrobacterium tumefaciens
BBa_K2448011 pPsiR from Agrobacterium tumefaciens
BBa_K2448012 pPsiA from Sinorhizobium fredii
BBa_K2448013 pPsiR from Sinorhizobium fredii
BBa_K2448014 pPsiA from Sinorhizobium meliloti
BBa_K2448015 pPsiR from Sinorhizobium meliloti
BBa_K2448017 pFruB from Escherichia coli

Terminators:

Part number Name Submitted to the registry Improves the function of an existing BioBrick Part
BBa_K2448005 B0015 with scars T and TGTT
BBa_K2448051 B0015 with scars AGCGGCATGC and GCAGA
BBa_K2448018 L3S1P51 terminator
BBa_K2448052 L2U3H03 Terminator

And various spacers in between the functional elements of our composite parts containing cloning sites :

Part number Name Submitted to the registry Improves the function of an existing BioBrick Part
BBa_K2448040 spacer with cloning sites XhoI and BsmBI
BBa_K2448041 spacer with cloning sites BsmBI and SphI
BBa_K2448042 spacer with cloning sites BamHI and BbsI
BBa_K2448043 spacer with cloning sites BbsI and NcoI
BBa_K2448044 spacer with cloning sites XhoI, BsmBI x2, SphI
BBa_K2448045 spacer with cloning sites BamHI, BbsI x2, NcoI
BBa_K2448046 spacer with cloning site SphI
BBa_K2448047 spacer with cloning site BamHI
BBa_K2448048 spacer with cloning site NcoI

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