To make sure we perform our experiments consistently, and that they can be reproduced by other scientists, we have written protocols for the experiments we have performed across the three subprojects. We have collected them all together below:
General (Used across subprojects)
- Protocol for PCR
- Protocol for gel electrophoresis
- Protocol for plasmid purification
- Protocol for DNA purification by gel extraction
- Protocol for Mix&Go Transformation
- Protocol for LB media
- Protocol for Colony PCR
- Protocol for DNA sequencing
- Protocol for growth curves and OD600 measurements
- Protocol for USER ligation
- Protocol for USER linearization
- Protocol for blunt ligation
- Protocol for Restriction digestion
- Protocol for transformation into BL21
Interdependency
- Protocol for YNB media
- Protocol for serial growth experiments
- Protocol for HPLC-MS quantification of tryptophan
Number control
- Protocol for gRNA seed sequence insertion
- Protocol for Heat-shock transformation
- Protocol for refined growth curve
Protein Import