Difference between revisions of "Team:TokyoTech/Attributions"

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<!DOCTYPE html>
 
<html>
 
<html>
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<title>Coli Sapiens</title>
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<meta charset="UTF-8">
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<meta name="viewport" content="width=device-width, initial-scale=1">
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<link rel="stylesheet" href="main.css">
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<style>
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body,h1,h2,h3,h4,h5 {font-family: "Arial", sans-serif}
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body {font-size:16px;}
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.w3-half img{margin-bottom:-6px;margin-top:16px;opacity:0.8;cursor:pointer}
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<body>
  
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<div id="loader-bg">
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  <div id="loader">
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    <div class="photo-show">
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    <img src="https://static.igem.org/mediawiki/2017/f/f4/T--TokyoTech--load_1.png" width="600">
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    <img src="https://static.igem.org/mediawiki/2017/4/43/T--TokyoTech--load_2.png" width="600">
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    </div>
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  </div>
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</div>
  
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<!-- Sidebar/menu -->
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<nav class="w3-sidebar w3-red w3-collapse w3-top w3-large w3-padding" style="z-index:3;width:300px;font-weight:bold;" id="mySidebar"><br>
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  <a href="javascript:void(0)" onclick="w3_close()" class="w3-button w3-hide-large w3-display-topleft" style="width:100%;font-size:20px">Close Menu</a>
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  <div class="w3-container" style="margin-top: 20px;margin-bottom: 25px" id="wrap">
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    <img src="https://static.igem.org/mediawiki/2017/a/a8/T--TokyoTech--logo_white_bright_10211603.png" style="width: 100%">
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  </div>
  
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  <div style="padding-top: 15px; padding-left: 25px; id="wrap">
  
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<div class="column full_size judges-will-not-evaluate">
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  <div id="contents" style="z-index: 10">
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<h3>★  ALERT! </h3>
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<p>This page is used by the judges to evaluate your team for the <a href="https://2017.igem.org/Judging/Medals">medal criterion</a> or <a href="https://2017.igem.org/Judging/Awards"> award listed above</a>. </p>
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<p> Delete this box in order to be evaluated for this medal criterion and/or award. See more information at <a href="https://2017.igem.org/Judging/Pages_for_Awards"> Instructions for Pages for awards</a>.</p>
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</div>
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<div class="clear"></div>
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    <ul class="click_menu_checkbox vertm_down">
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    <li style="margin-bottom: 10px; border: 5px double #fff; border-radius: 10px;">
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    <input type="checkbox" id="vmcb-a" />
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    <label for="vmcb-a"><a href="https://2017.igem.org/Team:TokyoTech">Home</a></label>
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    </li>
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    <li style="margin-bottom: 10px; border: 5px double #fff; border-radius: 10px">
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    <input type="checkbox" id="vmcb-b" />
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    <label for="vmcb-b"><a href="https://2017.igem.org/Team:TokyoTech/Medal">Achievements</a></label>
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    </li>
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    <li style="margin-bottom: 10px; border: 5px double #fff; border-radius: 10px">
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    <input type="checkbox" id="vmcb-c" />
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    <label for="vmcb-c"><a>Project</a></label>
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    <ul>
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      <li style="text-align: center;"><a href="https://2017.igem.org/Team:TokyoTech/Description" class="w3-bar-item w3-button w3-hover-white">Description</a></li>
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      <li style="text-align: center;"><a href="https://2017.igem.org/Team:TokyoTech/Project/Basic_Parts" onclick="w3_close()" class="w3-bar-item w3-button w3-hover-white">Basic Parts</a></li>
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      <li style="text-align: center;"><a href="https://2017.igem.org/Team:TokyoTech/Project/Composite_Parts" onclick="w3_close()" class="w3-bar-item w3-button w3-hover-white">Composite Parts</a></li>
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    </ul>
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    </li>
  
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    <li style="margin-bottom: 10px; border: 5px double #fff; border-radius: 10px">
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    <input type="checkbox" id="vmcb-d" />
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    <label for="vmcb-d"><a>Experiment</a></label>
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    <ul>
  
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        <li>
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        <input type="checkbox" id="vmcb-d1" />
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        <label for="vmcb-d1"><a href="https://2017.igem.org/Team:TokyoTech/Experiment/Overview" onclick="w3_close()" class="w3-bar-item w3-button w3-hover-white" style="text-align: center;">Overview</a></label>
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        </li>
  
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<div class="column full_size">
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        <li style="padding-bottom: 10px; padding-top: 5px">
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<h1>Attributions</h1>
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        <input type="checkbox" id="vmcb-d2" />
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          <label for="vmcb-d2"><a style="text-align: center;">Bacteria to <br>Human Cells ▼</a></label>
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            <ul>
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              <li style="text-align: center;"><a href="https://2017.igem.org/Team:TokyoTech/Experiment/TraI_Assay" onclick="w3_close()" class="w3-bar-item w3-button w3-hover-white">TraI Assay</a></li>
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              <li style="text-align: center;"><a href="https://2017.igem.org/Team:TokyoTech/Experiment/TraI_Improvement" onclick="w3_close()" class="w3-bar-item w3-button w3-hover-white">TraI Improvement <br>Assay</a></li>
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              <li style="text-align: center;"><a href="https://2017.igem.org/Team:TokyoTech/Experiment/TraR_Reporter_Assay" onclick="w3_close()" class="w3-bar-item w3-button w3-hover-white" >TraR Reporter <br>Assay</a></li>
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              <li style="text-align: center;"><a href="https://2017.igem.org/Team:TokyoTech/Experiment/Transcriptome_Analysis" onclick="w3_close()" class="w3-bar-item w3-button w3-hover-white">Transcriptome <br>Analysis</a></li>
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              <li style="text-align: center;"><a href="https://2017.igem.org/Team:TokyoTech/Experiment/Chimeric_Transcription_Factor" onclick="w3_close()" class="w3-bar-item w3-button w3-hover-white">Chimeric <br> Transcription <br> Factor Assay</a></li>
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            </ul>
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      </li>
  
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<p> Each team must clearly attribute work done by the student team members on this page. The team must distinguish work done by the students from work done by others, including the host labs, advisors, instructors, and individuals not on the team roster.
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      <li style="padding-bottom: 3px">
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<br><br>
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This is a bronze medal requirement. Please see the <a href="https://2017.igem.org/Judging/Medals">Medals requirements page</a> for more details.</p>
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    <label for="vmcb-d3"><a style="text-align: center;">Human Cells to <br>Bacteria ▼</a></label>
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        <ul>
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          <li><a href="https://2017.igem.org/Team:TokyoTech/Experiment/AHK4_Assay" onclick="w3_close()" class="w3-bar-item w3-button w3-hover-white">AHK4 Assay</a></li>
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          </ul>
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        </li>
  
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</div>
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        <li>
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        <input type="checkbox" id="vmcb-d4" />
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    <label for="vmcb-d4"><a href="https://2017.igem.org/Team:TokyoTech/InterLab" onclick="w3_close()" class="w3-bar-item w3-button w3-hover-white" style="text-align: center;">InterLab</a></label>
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        </li>
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    </ul>
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    </li>
  
  
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<div class="clear"></div>
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    <li style="margin-bottom: 10px; text-align: center; border: 5px double #fff; border-radius: 10px">
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    <input type="checkbox" id="vmcb-e" />
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    <label for="vmcb-e"><a href="https://2017.igem.org/Team:TokyoTech/Model">Modelling</a></label>
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    </li>
  
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    <li style="margin-bottom: 10px; text-align: center; border: 5px double #fff; border-radius: 10px">
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    <input type="checkbox" id="vmcb-f" />
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    <label for="vmcb-f"><a>Human Practices</a></label>
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    <ul>
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    <li style="text-align: center;"><a href="https://2017.igem.org/Team:TokyoTech/HP" onclick="w3_close()" class="w3-bar-item w3-button w3-hover-white">Overview</a></li>
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    <li style="text-align: center;"><a href="https://2017.igem.org/Team:TokyoTech/HP/Silver" onclick="w3_close()" class="w3-bar-item w3-button w3-hover-white">Silver</a></li>
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    <li style="text-align: center;"><a href="https://2017.igem.org/Team:TokyoTech/HP/Gold_Integrated" onclick="w3_close()" class="w3-bar-item w3-button w3-hover-white">Gold (Integrated)</a></li>
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    <li style="text-align: center;"><a href="https://2017.igem.org/Team:TokyoTech/Demonstrate" onclick="w3_close()" class="w3-bar-item w3-button w3-hover-white">Demonstrate</a></li>
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    <li style="text-align: center;"><a href="https://2017.igem.org/Team:TokyoTech/Collaborations" onclick="w3_close()" class="w3-bar-item w3-button w3-hover-white">Collaborations</a></li>
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    </ul>
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    </li>
  
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<div class="column half_size">
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    <li style="margin-bottom: 10px; text-align: center; border: 5px double #fff; border-radius: 10px">
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<h5> Why is this page needed? </h5>
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    <input type="checkbox" id="vmcb-g" />
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<p>The Attribution requirement helps the judges know what you did yourselves and what you had help with. We don't mind if you get help with difficult or complex techniques, but you must report what work your team did and what work was done by others.</p>
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    <label for="vmcb-g"><a>About us</a></label>
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<p>
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    <ul>
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For example, you might choose to work with an animal model during your project. Working with animals requires getting a license and applying far in advance to conduct certain experiments in many countries. This is difficult to achieve during the course of a summer, but much easier if you can work with a postdoc or PI who has the right licenses.</p>
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    <li style="text-align: center;"><a href="https://2017.igem.org/Team:TokyoTech/Team" onclick="w3_close()" class="w3-bar-item w3-button w3-hover-white">Team</a></li>
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</div>
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    <li style="text-align: center;"><a href="https://2017.igem.org/Team:TokyoTech/Attributions" onclick="w3_close()" class="w3-bar-item w3-button w3-hover-white">Attributions</a></li>
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    <li style="text-align: center;"><a href="https://2017.igem.org/Team:TokyoTech/Sponsors" onclick="w3_close()" class="w3-bar-item w3-button w3-hover-white">Sponsors</a></li>
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    </ul>
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    </li>
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    </ul>
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    </div>
  
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<h5> What should this page have?</h5>
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<header class="w3-container w3-top w3-hide-large w3-red w3-xlarge w3-padding">
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  <a href="javascript:void(0)" class="w3-button w3-red w3-margin-right" onclick="w3_open()"><img src="http://www.adultb2b.biz/wp-content/themes/adultb2b%20-%20new/assets/images/menuBtn.png" style="width: 30px"></a>
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  <span style="padding-top: 5px">iGEM Tokyo Tech</span>
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</header>
  
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<ul>
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<!-- Overlay effect when opening sidebar on small screens -->
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<li>General Support</li>
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<div class="w3-overlay w3-hide-large" onclick="w3_close()" style="cursor:pointer" title="close side menu" id="myOverlay"></div>
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<li>Project support and advice</li>
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<li>Fundraising help and advice</li>
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<li>Lab support</li>
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<li>Difficult technique support</li>
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<li>Project advisor support</li>
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<li>Wiki support</li>
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<li>Presentation coaching</li>
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<li>Human Practices support</li>
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<li> Thanks and acknowledgements for all other people involved in helping make a successful iGEM team</li>
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</ul>
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</div>
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<div class="w3-main" style="margin-left:340px;margin-right:40px">
  
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<div class="clear"></div>
 
  
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<div class="w3-container" id="contact" style="margin-top:30px">
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      <h1 class="w3-xxxlarge w3-text-red" style="padding-bottom: 10px;padding-top: 10px" align="center">Attributions</h1>
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    </div>
  
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<div class="highlight">
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<hr>
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<h5> Can we base our project on a previous one? </h5>
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<p>Yes! You can have a project based on a previous team, or based on someone else's idea, <b>as long as you state this fact very clearly and give credit for the original project.</b> </p>
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<div class="w3-container" id="overview" style="margin-top:20px">
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        <p style="font-size: 16px">　We are proud to say that all the ideas we worked on this year were proposed by undergraduate members of iGEM 2017 team TokyoTech. We also want to thank all those advisors and instructors who helped us discuss these ideas and guided us through doing the experiments. The whole experimental data produced by our team comes from experiments all carried out by undergraduates.</p>
 
</div>
 
</div>
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<div class="w3-container" id="overview" style="margin-top:20px">
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        <p style="font-size: 16px">  The project "Coli Sapiens" was proposed by Hazuki Hasegawa and Hajime Fujita. </p>
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<hr>
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</div>
 
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<div class="column half_size">
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<div class="w3-container" id="overview" style="margin-top:20px">
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        <h2 style="margin-top: 10px">Members</h2>
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        <p style="font-size: 16px"><span style="font-weight: bold; border-bottom: solid 1px;">Performing all cloning (transformation, culture cells, mini prep)</span></p>
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        <p style="font-size: 16px"> - Hazuki Hasegawa, Kazunori Motai, Takuma Yasue, Kohei Umedera, Saki Arakaki</p>
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        <p style="font-size: 16px"><span style="font-weight: bold; border-bottom: solid 1px;">Performing parts construction (restriction digest, ligation)</span></p>
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        <p style="font-size: 16px"> - Hazuki Hasegawa, Kazunori Motai, Takuma Yasue, Kohei Umedera, Saki Arakaki</p>
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        <p style="font-size: 16px"><span style="font-weight: bold; border-bottom: solid 1px;">Performing TraI Assay</span></p>
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        <p style="font-size: 16px"> - Kazunori Motai</p>
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        <p style="font-size: 16px"><span style="font-weight: bold; border-bottom: solid 1px;">Performing Human Cell Assay</span></p>
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        <p style="font-size: 16px"> - Saki Arakaki, Takuma Yasue</p>
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        <p style="font-size: 16px"><span style="font-weight: bold; border-bottom: solid 1px;">Performing AHK4 assay</span></p>
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        <p style="font-size: 16px"> - Kohei Umedera</p>
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        <p style="font-size: 16px"><span style="font-weight: bold; border-bottom: solid 1px;">Modelling</span></p>
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        <p style="font-size: 16px"> - Michio Takagi, Saki Arakaki, Hajime Fujita, Hazuki Hasegawa</p>
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        <p style="font-size: 16px"><span style="font-weight: bold; border-bottom: solid 1px;">Wiki and slide design</span></p>
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        <p style="font-size: 16px"> - Hajime Fujita, Hazuki Hasegawa, Moe Takahashi, Kazuya Isawa with help from other team members</p>
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        <p style="font-size: 16px"><span style="font-weight: bold; border-bottom: solid 1px;">Human Practices</span></p>
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        <p style="font-size: 16px"> - Hajime Fujita, Moe Takahashi, Kazuya Isawa, Hinako Kataoka, Hikaru Nakaya, Tamon Sato with help from other team members</p>
  
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<h5>Inspiration</h5>
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<hr>
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<p>Take a look at what other teams have done:</p>
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<ul>
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<li><a href="https://2011.igem.org/Team:Imperial_College_London/Team">2011 Imperial College London</a> (scroll to the bottom)</li>
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<li><a href="https://2014.igem.org/Team:Exeter/Attributions">2014 Exeter </a></li>
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<li><a href="https://2014.igem.org/Team:Melbourne/Attributions">2014 Melbourne </a></li>
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<li><a href="https://2014.igem.org/Team:Valencia_Biocampus/Attributions">2014 Valencia Biocampus</a></li>
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</ul>
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<h5>Team training and Project start</h5>
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  <div class="w3-container" id="overview" style="margin-top:20px">
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<p>Tell us if your institution teaches an iGEM or synthetic biology class and when you started your project:</p>
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<ul>
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<li>Does your institution teach an iGEM or synthetic biology course?</li>
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<li>When did you start this course?</li>
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<li>Are the syllabus and course materials freely available online?</li>
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<li>When did you start your brainstorming?</li>
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<li>When did you start in the lab?</li>
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<li>When did you start working on  your project?</li>
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</ul>
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        <h2 style="margin-top: 10px">Contributions</h2>
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        <ul class="non_dotted_list">
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          <li><h2><span style="font-size: 20px">General Support</span></h2>
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            <p style="font-size: 16px"> - <span style="font-weight: bold;">Prof. Nakashima and Prof. Hayashi</span> let us use their labs for all of our experiments and gave us advice on experimental skills.</p>
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            <p style="font-size: 16px"> - <span style="font-weight: bold;">Prof. Tagawa</span> gave us advice on our project and helped us set up a forum.</p>
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            <p style="font-size: 16px"> - <span style="font-weight: bold;">Prof. Yamamura</span> gave us advice on modeling.</p>
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            <p style="font-size: 16px"> - <span style="font-weight: bold;">Promega Corporation and Leave a Nest Co.,ltd</span> gave us several kinds of restriction enzymes used in our experiments at no charge.</p>
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            <p style="font-size: 16px"> - We'd like to thank all advisors and instructors who helped us through the discussion of these ideas and instructed us about experimental procedures.</p>
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          </li>
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<br>
  
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</div>
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          <li><h2><span style="font-size: 20px">Instrumental Analysis Support</span></h2>
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            <p style="font-size: 16px"> - <span style="font-weight: bold;">Biomaterial Analysis Center, Technical Department</span>, checked the sequences of the plasmids which we asked.</p>
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          </li>
  
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<br>
  
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          <li><h2><span style="font-size: 20px">Gene Synthesis</span></h2>
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            <p style="font-size: 16px"> - We'd also like to thank <span style="font-weight: bold;">MBL and IDT</span>.</p>
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          </li>
  
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<br>
  
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          <li><h2><span style="font-size: 20px">Human Practice Support</span></h2>
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            <p style="font-size: 16px"> - Koshigaya-Kita High School and Kasukabe High School warmly accepted our school visits.</p>
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            <p style="font-size: 16px"> - <span style="font-weight: bold;">Prof. Kiga, Prof. Oshima, Dr. Jiro Nudeshima,</span> who are working on The Tokyo Foundation, gave us lectures.</p>
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            <p style="font-size: 16px"> - <span style="font-weight: bold;">Prof. Nakasaki</span> gave us great and helpful advice.</p>
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          </li>
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<br>
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          <li><h2><span style="font-size: 20px">Presentation Advisor</span></h2>
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            <p style="font-size: 16px"> - We'd like to thank all the people who came to check our presentations and gave us useful feedbacks.</p>
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            <div class="table">
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                <p style="font-size: 16px">Professor:</p>
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                <p style="font-size: 16px"><span style="font-weight: bold; font-size: 14px">Yasunori Aizawa, Noriyuki Asakura, Hiroshi Iwasaki, Toshiaki Kamachi, Yasunori Tanji, Takeshi Hata, Takeshi Hirasawa, Junji Hirota, Shinji Masuda, Yuki Yamaguchi, Hideya Yuasa, Masaaki Wachi, Robert F. Whittier</span></p>
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          </li>
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          <li><h2><span style="font-size: 20px">Special Thanks</span></h2>
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            <p style="font-size: 16px"> - We'd like to thank <span style="font-weight: bold;">Takafumi Yamashino</span> for giving us the <span style="font-style: italic">E. coli</span> KMI002 strain used in AHK4 Assay.</p>
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            <p style="font-size: 16px"> - We'd like to thank <span style="font-weight: bold;">Tomohiro Morohoshi</span> for helping us test C8 productivity in TraI Assay.</p>
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          <p style="font-size: 16px"> -  We'd like to thank many staffs, friends, and families for their support and encouragement.</p>
 
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<div class="w3-container" id="contact" style="margin-top:20px">
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<p id="pageTop" style="text-align:right"><a href="#wrap"><img src="https://static.igem.org/mediawiki/2017/0/0d/T--TokyoTech--page_top_2.png" style="width:200px"></a></p>
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<!-- W3.CSS Container -->
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<div class="w3-light-grey w3-container w3-padding-32" style="margin-top:75px;padding-right:58px"><p class="w3-right"><a href="http://96haji.me/" title="W3.CSS" target="_blank" class="w3-hover-opacity">Hajime Fujita with W3.CSS: All Rights Reserved</a></p></div>
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<script src="http://ajax.googleapis.com/ajax/libs/jquery/1.11.1/jquery.min.js"></script>
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Latest revision as of 00:38, 2 November 2017

<!DOCTYPE html> Coli Sapiens

iGEM Tokyo Tech

Attributions

　We are proud to say that all the ideas we worked on this year were proposed by undergraduate members of iGEM 2017 team TokyoTech. We also want to thank all those advisors and instructors who helped us discuss these ideas and guided us through doing the experiments. The whole experimental data produced by our team comes from experiments all carried out by undergraduates.

The project "Coli Sapiens" was proposed by Hazuki Hasegawa and Hajime Fujita.

Members

Performing all cloning (transformation, culture cells, mini prep)

- Hazuki Hasegawa, Kazunori Motai, Takuma Yasue, Kohei Umedera, Saki Arakaki

Performing parts construction (restriction digest, ligation)

- Hazuki Hasegawa, Kazunori Motai, Takuma Yasue, Kohei Umedera, Saki Arakaki

Performing TraI Assay

- Kazunori Motai

Performing Human Cell Assay

- Saki Arakaki, Takuma Yasue

Performing AHK4 assay

- Kohei Umedera

Modelling

- Michio Takagi, Saki Arakaki, Hajime Fujita, Hazuki Hasegawa

Wiki and slide design

- Hajime Fujita, Hazuki Hasegawa, Moe Takahashi, Kazuya Isawa with help from other team members

Human Practices

- Hajime Fujita, Moe Takahashi, Kazuya Isawa, Hinako Kataoka, Hikaru Nakaya, Tamon Sato with help from other team members

Contributions

  • General Support

    - Prof. Nakashima and Prof. Hayashi let us use their labs for all of our experiments and gave us advice on experimental skills.

    - Prof. Tagawa gave us advice on our project and helped us set up a forum.

    - Prof. Yamamura gave us advice on modeling.

    - Promega Corporation and Leave a Nest Co.,ltd gave us several kinds of restriction enzymes used in our experiments at no charge.

    - We'd like to thank all advisors and instructors who helped us through the discussion of these ideas and instructed us about experimental procedures.


  • Instrumental Analysis Support

    - Biomaterial Analysis Center, Technical Department, checked the sequences of the plasmids which we asked.


  • Gene Synthesis

    - We'd also like to thank MBL and IDT.


  • Human Practice Support

    - Koshigaya-Kita High School and Kasukabe High School warmly accepted our school visits.

    - Prof. Kiga, Prof. Oshima, Dr. Jiro Nudeshima, who are working on The Tokyo Foundation, gave us lectures.

    - Prof. Nakasaki gave us great and helpful advice.


  • Presentation Advisor

    - We'd like to thank all the people who came to check our presentations and gave us useful feedbacks.

    Professor:

    Yasunori Aizawa, Noriyuki Asakura, Hiroshi Iwasaki, Toshiaki Kamachi, Yasunori Tanji, Takeshi Hata, Takeshi Hirasawa, Junji Hirota, Shinji Masuda, Yuki Yamaguchi, Hideya Yuasa, Masaaki Wachi, Robert F. Whittier

  • Special Thanks

    - We'd like to thank Takafumi Yamashino for giving us the E. coli KMI002 strain used in AHK4 Assay.

    - We'd like to thank Tomohiro Morohoshi for helping us test C8 productivity in TraI Assay.

    - We'd like to thank many staffs, friends, and families for their support and encouragement.

Hajime Fujita with W3.CSS: All Rights Reserved