Difference between revisions of "Team:Virginia/HP/SilverGold"

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<h3>★  ALERT! </h3>
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<center><h1>Integrated Human Practices</h1></center> <br>  
<p>This page is used by the judges to evaluate your team for the <a href="https://2017.igem.org/Judging/Medals">medal criterion</a> or <a href="https://2017.igem.org/Judging/Awards"> award listed above</a>. </p>
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<p> Delete this box in order to be evaluated for this medal criterion and/or award. See more information at <a href="https://2017.igem.org/Judging/Pages_for_Awards"> Instructions for Pages for awards</a>.</p>
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<center><h2 style="font-size:30px;font-family:Montserrat">Tim Castillo</h2><br></center>
  
<h1>Silver Medal Human Practices</h1>
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<div style = 'padding-right: 90px; padding-left: 90px;line-height: 25px;' >
<p>iGEM teams are leading in the area of Human Practices because they conduct their projects within a social/environmental context, to better understand issues that might influence the design and use of their technologies.</p>
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<p style="font-size:20px;">
<p>Teams work with students and advisors from the humanities and social sciences to explore topics concerning ethical, legal, social, economic, safety or security issues related to their work. Consideration of these Human Practices is crucial for building safe and sustainable projects that serve the public interest. </p>
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Tim Castillo is a Wastewater Facility Manager at Rivanna Wastewater Treatment Plant in Charlottesville, Virginia. He gave us a tour of the Rivanna facility, gave a presentation on the wastewater treatment process, and sent us data from the Rivanna plant with regular to influent and effluent concentrations of various compounds. We have corresponded with Mr. Castillo throughout the project.  
<p>For more information, please see the <a href="https://2017.igem.org/Competition/Human_Practices">Human Practices page</a>.</p>
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Before our visit to Rivanna, the team had already decided we would be concentrating our efforts in wastewater treatment. We had conducted research into where wastewater originates and what kind of consequences exist, both pathogenic and environmental, if it goes untreated. The purpose of our visit, then, was to gain insight into what a device to improve the efficiency of wastewater treatment processes would look like.  
<h3>Silver Medal Criterion #3</h3>
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<p>Convince the judges you have thought carefully and creatively about whether your work is safe, responsible and good for the world. You could accomplish this through engaging with your local, national and/or international communities or other approaches. Please note that standard surveys will not fulfill this criteria.</p>
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<br><br>
<h5>Some Human Practices topic areas </h5>
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<ul>
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<li>Philosophy</li>
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<li>Public Engagement / Dialogue</li>
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<li>Education</li>
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<li>Product Design</li>
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<li>Scale-Up and Deployment Issues</li>
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<li>Environmental Impact</li>
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<li>Ethics</li>
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<li>Safety</li>
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<li>Security</li>
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<li>Public Policy</li>
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<li>Law and Regulation</li>
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<li>Risk Assessment</li>
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</ul>
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</div>
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While Castillo gave us a full tour, we were focused specifically on the Bardonpho process. This five-step process is the Biological, or Secondary, treatment because it uses bacteria to remove harmful compounds. We were focused on ammonia, as our previous research indicated the importance of keep effluent ammonia levels low. The Bardonpho process is multiple steps because, within the process, oxygen concentrations vary between anaerobic, anoxic, and aerobic. In the aerobic condition, aerators pump air to fuel nitrification. Nitrification is the oxidation of ammonia to nitrites, which are then converted to nitrates. 
  
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<h5>What should we write about on this page?</h5>
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<p>On this page, you should write about the Human Practices topics you considered in your project, and document any special activities you did (such as visiting experts, talking to lawmakers, or doing public engagement). This should include all of the work done for the Silver Medal Criterion #3. Details for your Gold medal work and/or work for the two Human Practices special prizes should be put on those specified pages.</p>
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<center>
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<figure>
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<img src="https://static.igem.org/mediawiki/2017/f/f3/Virginia--Castillo.jpeg" style="width:600px;">
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<figcaption><p>Lauren, Tim Castillo, Ilya and Christia at the Rivanna Plant</p></figcaption>
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</figure></center>
  
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<br>
<h5>Inspiration</h5>
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<p>Read what other teams have done:</p>
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<ul>
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<li><a href="https://2014.igem.org/Team:Dundee/policypractice/experts">2014 Dundee </a></li>
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<li><a href="https://2014.igem.org/Team:UC_Davis/Policy_Practices_Overview">2014 UC Davis </a></li>
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<li><a href="https://2013.igem.org/Team:Manchester/HumanPractices">2013 Manchester </a></li>
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<li><a href="https://2013.igem.org/Team:Cornell/outreach">2013 Cornell </a></li>
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</ul>
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<center><h2 style="font-size:30px;font-family:Montserrat">Professor Aaron Mills</h2><br></center>
<h3>★  ALERT! </h3>
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<p>This page is used by the judges to evaluate your team for the <a href="https://2017.igem.org/Judging/Medals">medal criterion</a> or <a href="https://2017.igem.org/Judging/Awards"> award listed above</a>. </p>
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<p> Delete this box in order to be evaluated for this medal criterion and/or award. See more information at <a href="https://2017.igem.org/Judging/Pages_for_Awards"> Instructions for Pages for awards</a>.</p>
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<p style="font-size:20px;">Professor Mills of the Environmental Sciences Department at UVA has worked extensively with wastewater and the bacteria involved in its processing. We approached him as we were finalizing the design of our project.
  
<h1>Gold Medal and Integrated Human Practices</h1>
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<br><br>
  
<p>This page will contain information for your Gold medal Human Practices work, which you can also use to nominate your team for the Best Integrated Human Practices page. To make things easier, we have combined the Gold medal page with the Best Integrated Human Practices page since we expect the work to overlap considerably. </p>
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Mills provided Insight into the best way to culture <i>Paracoccus denitrificans</i> and <i>Nitrosomonas europaea</i>, but more importantly, our discussion helped us find a niche for our project. From our meeting with Tim Castillo, we knew that aeration costs accounted for a major portion of wastewater treatment energy bills. The goal of our device, we hope, is to slash these costs by oxidizing ammonia at a lower oxygen demand. Professor Mills revealed that this is already a process for oxidizing ammonia anaerobically, called Anammox (ANaerobic AMMonium OXidation). He was optimistic that this microbial process would one day revolutionize wastewater treatment. The problem with Anammox today is its highly restrictive growth rate and extreme sensitivity to oxygen. Aside from the infrastructural changes that would need to take place for Anammox’s implementation, there is clearly further research to be done before it can be maximally harnessed in treatment plants. While we look forward to the use of Anammox in the future, we found a niche for our device. It can flourish in the transition, functioning more efficiently than current methods without requiring the major infrastructure changes of Anammox. Our time with Professor Mills helped provide context and scope for the project.
<p>iGEM teams are unique and leading the field because they "go beyond the lab" to imagine their projects in a social/environmental context, to better understand issues that might influence the design and use of their technologies.</p>
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<p>Teams work with students and advisors from the humanities and social sciences to explore topics concerning ethical, legal, social, economic, safety or security issues related to their work. Consideration of these Human Practices is crucial for building safe and sustainable projects that serve the public interest. </p>
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<p>For more information, please see the <a href="https://2017.igem.org/Competition/Human_Practices">Human Practices page</a>.</p>
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<div class="clear"></div>
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Professor Mills also provided additional considerations that went into our experimental design. He helped teach us how to culture bacteria anaerobically. Once our device is fully functioning in wastewater aerobically, we want to find the level of aeration necessary for efficient, yet cost-effective functioning. To do so, we will culture our device anaerobically first, and in ensuing experiments, test at varying oxygen concentrations.  </p>
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<img src="https://static.igem.org/mediawiki/2017/c/cc/Virginia--Mills.jpeg" style="width:600px;">
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<figcaption><p>Prof. Aaron Mills, David and Vikram in Mills's office</p></figcaption>
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</figure></center>
  
<div class="column half_size">
 
<h3>Gold Medal Criterion #1</h3>
 
<p>Expand on your silver medal activity by demonstrating how you have integrated the investigated issues into the design and/or execution of your project.</p>
 
  
 
</div>
 
</div>
  
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<h3>Best Integrated Human Practices Special Prize</h3>
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<p>
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<center><h2 style="font-size:30px;font-family:Montserrat">Denitrification Intermediates in the Environment</h2><br></center>
To compete for the <a href="https://2017.igem.org/Judging/Awards">Best Integrated Human Practices prize</a>, please describe your work on this page and also fill out the description on the <a href="https://2017.igem.org/Judging/Judging_Form">judging form</a>.
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<br><br>
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<div style = 'padding-right: 90px; padding-left: 90px;line-height: 25px;' >
You must also delete the message box on the top of this page to be eligible for this prize.
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<p style="font-size:20px;"> Our kinetic model makes it possible to predict and monitor the concentrations of denitrification intermediates, many of which are harmful to the environment. For instance, according to Pan <i>et al.</i> (2014), nitrous oxide N<sub>2</sub>O is "[...] a potent greenhouse gas with a 300-fold stronger radiative force than carbon dioxide, and is also [the] primary ozone depleting substancein the 21st century". If accumulation of any intermediate is a concern, our model allows one to simulate a range of conditions and pick the one where no such issues occur. See our <a href="https://2017.igem.org/Team:Virginia/Model">modeling page</a> for details!</p>
</p>
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</div>
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<br><br><br>
<div class="clear"></div>
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<h5>Inspiration</h5>
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<p>Here are a few examples of excellent Integrated Human Practices work:</p>
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<ul>
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<li><a href="https://2016.igem.org/Team:INSA-Lyon/Integrated_Practices">2016 INSA Lyon</a></li>
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<li><a href="https://2016.igem.org/Team:UofC_Calgary/Integrated_Practices">2016 UofC Calgary</a></li>
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<li><a href="https://2015.igem.org/Team:Bielefeld-CeBiTec/Practices">2015 Bielefeld</a></li>
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<li><a href="https://2015.igem.org/Team:Edinburgh/Practices">2015 Edinburgh</a></li>
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</ul>
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</html>
 
</html>

Latest revision as of 00:55, 2 November 2017




Integrated Human Practices



Tim Castillo


Tim Castillo is a Wastewater Facility Manager at Rivanna Wastewater Treatment Plant in Charlottesville, Virginia. He gave us a tour of the Rivanna facility, gave a presentation on the wastewater treatment process, and sent us data from the Rivanna plant with regular to influent and effluent concentrations of various compounds. We have corresponded with Mr. Castillo throughout the project.

Before our visit to Rivanna, the team had already decided we would be concentrating our efforts in wastewater treatment. We had conducted research into where wastewater originates and what kind of consequences exist, both pathogenic and environmental, if it goes untreated. The purpose of our visit, then, was to gain insight into what a device to improve the efficiency of wastewater treatment processes would look like.

While Castillo gave us a full tour, we were focused specifically on the Bardonpho process. This five-step process is the Biological, or Secondary, treatment because it uses bacteria to remove harmful compounds. We were focused on ammonia, as our previous research indicated the importance of keep effluent ammonia levels low. The Bardonpho process is multiple steps because, within the process, oxygen concentrations vary between anaerobic, anoxic, and aerobic. In the aerobic condition, aerators pump air to fuel nitrification. Nitrification is the oxidation of ammonia to nitrites, which are then converted to nitrates.

Lauren, Tim Castillo, Ilya and Christia at the Rivanna Plant


Professor Aaron Mills


Professor Mills of the Environmental Sciences Department at UVA has worked extensively with wastewater and the bacteria involved in its processing. We approached him as we were finalizing the design of our project.

Mills provided Insight into the best way to culture Paracoccus denitrificans and Nitrosomonas europaea, but more importantly, our discussion helped us find a niche for our project. From our meeting with Tim Castillo, we knew that aeration costs accounted for a major portion of wastewater treatment energy bills. The goal of our device, we hope, is to slash these costs by oxidizing ammonia at a lower oxygen demand. Professor Mills revealed that this is already a process for oxidizing ammonia anaerobically, called Anammox (ANaerobic AMMonium OXidation). He was optimistic that this microbial process would one day revolutionize wastewater treatment. The problem with Anammox today is its highly restrictive growth rate and extreme sensitivity to oxygen. Aside from the infrastructural changes that would need to take place for Anammox’s implementation, there is clearly further research to be done before it can be maximally harnessed in treatment plants. While we look forward to the use of Anammox in the future, we found a niche for our device. It can flourish in the transition, functioning more efficiently than current methods without requiring the major infrastructure changes of Anammox. Our time with Professor Mills helped provide context and scope for the project.

Professor Mills also provided additional considerations that went into our experimental design. He helped teach us how to culture bacteria anaerobically. Once our device is fully functioning in wastewater aerobically, we want to find the level of aeration necessary for efficient, yet cost-effective functioning. To do so, we will culture our device anaerobically first, and in ensuing experiments, test at varying oxygen concentrations.


Prof. Aaron Mills, David and Vikram in Mills's office


Denitrification Intermediates in the Environment


Our kinetic model makes it possible to predict and monitor the concentrations of denitrification intermediates, many of which are harmful to the environment. For instance, according to Pan et al. (2014), nitrous oxide N2O is "[...] a potent greenhouse gas with a 300-fold stronger radiative force than carbon dioxide, and is also [the] primary ozone depleting substancein the 21st century". If accumulation of any intermediate is a concern, our model allows one to simulate a range of conditions and pick the one where no such issues occur. See our modeling page for details!