Difference between revisions of "Team:Freiburg/Tumor microenvironment"

 
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  <div class="flex-item-sidebar-project" style="font-weight: bold; background-color: #DCDCDC; font-size: 130%">Project</div>
 
  <div class="flex-item-sidebar-project"><a href="https://2017.igem.org/Team:Freiburg/Introduction">Introduction</a></div>
 
  <div class="flex-item-sidebar-project"><a href="https://2017.igem.org/Team:Freiburg/Motivation">Motivation</div>
 
  <div class="flex-item-sidebar-project"><a href="https://2017.igem.org/Team:Freiburg/CAR">CAR T Cells</div> 
 
  <div class="flex-item-sidebar-project"><a href="https://2017.igem.org/Team:Freiburg/Tumor_microenvironment"><b>Tumor Microenvironment</b></div> 
 
  <div class="flex-item-sidebar-project"><a href="https://2017.igem.org/Team:Freiburg/Design">AND Gate</div> 
 
  <div class="flex-item-sidebar-project">Knockout</div> 
 
  <div class="flex-item-sidebar-project"><a href="https://2017.igem.org/Team:Freiburg/Demonstrate">Demonstrate</div> 
 
  <div class="flex-item-sidebar-project"><a href="https://2017.igem.org/Team:Freiburg/Outlook">Outlook</div> 
 
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<h1 align="center">Tumor Microenvironment</h1>
 
<h1 align="center">Tumor Microenvironment</h1>
  
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<p>Tumor microenvironment (TM) refers to the cellular environment surrounding a tumor, which includes blood vessels, normal cells and molecules. The interaction between a tumor and its microenvironment results in different physiological processes providing both beneficial and adverse consequences for tumorigenesis <span class="italic">(Quail & Joyce, 2013)</span>. Gene expression is altered in tumor cells to secrete molecules such as cytokines and growth factors and cellular components for instance exosomes to recruit stroma and vascular cells <span class="italic">(Quail & Joyce, 2013; Mittal et al., 2014)</span>. Regardless of different tumor types and their tissue of origin there are some general hallmarks that govern tumorigenesis. Various immune effector cells can also be found in tumor microenvironment, yet their anti-tumor functions are downregulated due to tumor-derived signals such as cytokines <span class="italic">(TL Whiteside, 2013)</span>. Hypoxia is defined as the reduction or lack of oxygen in organs, tissues or cells <span class="italic">(Wu D. & Yotnda P., 2010)</span>. Hypoxia is a constantly evolving participant in overall tumor growth <span class="italic">(Patel & Sant, 2016; Kim Y et al.,2009)</span> and remains the predominant regulator of angiogenesis in the tumor microenvironment <span class="italic">(Mittal et al., 2014)</span>. Tumor angiogenesis is normally induced by a tumor to generate its dedicated blood supply for oxygen and other nutrients by secretion of various growth factors including vascular endothelial growth factor (VEGF). VEGF promotes growth of blood vessels of a tumor and is regarded as constituent element of the tumor microenvironment <span class="italic">(Mittal et al. 2014)</span>. In addition, acidic extracellular pH is a major feature of tumor tissue due to lactate secretion from anaerobic glycolysis and CO<sub>2</sub> from the pentose phosphate pathway <span class="italic">(Kato et al. 2013)</span>. Those factors that determine the nature of tumor are considered to develop targeted therapies. In our project, three of the most common characteristics of tumor microenvironment are chosen to implement one AND-Gate and control the expression of CAR.  
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<p>Tumor microenvironment (TM) refers to the cellular environment surrounding a tumor, which includes blood vessels, normal cells and molecules. The interaction between a tumor and its microenvironment results in different physiological processes providing both beneficial and adverse consequences for tumorigenesis (Quail & Joyce, 2013). Generally speaking, gene expression is altered in tumor cells leading to the secretion of various molecules such as cytokines, growth factors, and cellular components, for instance, exosomes to recruit stroma and vascular cells (Quail & Joyce, 2013; Mittal <i>et al.</i>, 2014). Additionally, various immune effector cells can also be found in the tumor microenvironment, yet their anti-tumor functions are downregulated due to tumor-derived signals such as cytokines (Whiteside, 2008). There are several factors which are altered in comparison to the healthy interstitium. In the following we will highlight and describe some of the major factors.
 
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<h2>Hypoxia</h2>
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<p>The oxygen supply provided by blood vessels is designed to support the regular amount of cells in the tissue. When a tumor is present in the tissue, the oxygen level is not sufficient to supply the cells in and around the tumor with enough oxygen. This oxygen depletion occurs due to the high metabolism and proliferation rate of tumor cells. The result is hypoxia in the microenvironment of tumors. It was shown that HIF1α, a transcription factor of HRE, gets stabilized under hypoxia.
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                <img src="https://static.igem.org/mediawiki/2017/c/cb/T-FREIBURG-tumor-micro.png" alt="Tumor Microenvironment" height="100%" width="100%">
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                    <p style="font-size:14px;"><strong>Figure 1: Tumor Microenvironment</strong> <br>
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                          In the tumor microenvironment the levels of VEGF (vascular endothelial growth factor) are increased, while the extracellular pH as well as the oxygen concentration decrease, which creates an acidic and hypoxic environment.</p>
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<p>One of the key characterisitics of tumors is their fast growth, which in turn leads to a <b>lack of oxygen</b>, termed hypoxia (Yotnda <i>et al.</i>, 2011). Hypoxia (<b>Fig. 1</b>) is a constantly evolving participant in overall tumor growth (Patel & Sant, 2016; Kim <i>et al.</i>, 2009) and remains the predominant regulator of angiogenesis in the tumor microenvironment (Mittal <i>et al.</i>, 2014). The actual physiological level of oxygen in healthy tissues ranges from 3-6 % (Tian & Bae, 2012), while that of tumors is approximately 1 % (McKeown, 2014), which can be an important factor to distinguish healthy tissues and tumors.
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<p>To overcome this oxygen limitation, tumors typically induce angiogenesis to generate its dedicated blood supply for oxygen and other nutrients. To do so, it secretes various growth factors, including <b>vascular endothelial growth factor (VEGF)</b>. VEGF (<b>Fig. 1</b>) promotes growth of blood vessels and is regarded as constituent element of the tumor microenvironment (Mittal <i>et al.</i>, 2014).
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<p>In addition, <b>acidic extracellular pH </b>(<b>Fig. 1</b>) is a major feature of tumor tissue due to lactate secretion from anaerobic glycolysis and CO<sub>2</sub> from the pentose phosphate pathway (Kato <i>et al.</i>, 2013). Studies on different tumor nodules in human patients reveal an average extracellular pH of 7.0, in contrast to the physiological pH of 7.4 (Tian & Bae, 2012).
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<p>Those factors that determine the nature of the tumor are considered by most therapeutic approaches to develop targeted therapies. Hypoxia, low pH and VEGF are three common characteristics of the tumor microenvironment. Therefore, we chose these conditions to control the expression of <a href="https://2017.igem.org/Team:Freiburg/CAR"> chimeric antigen receptor (CAR)</a> in T cells by an <a href="https://2017.igem.org/Team:Freiburg/Design">AND gate</a>.
 
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<h2>pH</h2>
 
<p>As a result of the hypoxic conditions in the tissue around the tumor, the cells switch to anaerobic metabolism, which leads to the secretion of lactic acid. The effect is a lowering of the pH value. In our project we make use of the ability of cells to sense low pH. A low pH activates the TDAG8 receptor, thus triggering a signaling cascade which ends in the activation of pCRE.
 
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<h2>VEGF (Vascular Endothelial Growth Factor)</h2>
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<p>VEGF is often found in high concentrations in the microenvironment of tumors. Tumor cells secrete VEGF in order to trigger the formation of new blood vessels thereby overcoming hypoxia. High VEGF concentrations are detected by the VEGFR2-receptor leading to a signaling cascade which forms the transcription factor NFAT. pCTLA4 is then activated via NFAT.
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                      <p><strong>CAR T Cells</strong></p></a>
 
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                      <p><strong>AND Gate</strong></p></a>
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Latest revision as of 00:59, 2 November 2017

Tumor Microenvironment


Tumor microenvironment (TM) refers to the cellular environment surrounding a tumor, which includes blood vessels, normal cells and molecules. The interaction between a tumor and its microenvironment results in different physiological processes providing both beneficial and adverse consequences for tumorigenesis (Quail & Joyce, 2013). Generally speaking, gene expression is altered in tumor cells leading to the secretion of various molecules such as cytokines, growth factors, and cellular components, for instance, exosomes to recruit stroma and vascular cells (Quail & Joyce, 2013; Mittal et al., 2014). Additionally, various immune effector cells can also be found in the tumor microenvironment, yet their anti-tumor functions are downregulated due to tumor-derived signals such as cytokines (Whiteside, 2008). There are several factors which are altered in comparison to the healthy interstitium. In the following we will highlight and describe some of the major factors.

Tumor Microenvironment

Figure 1: Tumor Microenvironment
In the tumor microenvironment the levels of VEGF (vascular endothelial growth factor) are increased, while the extracellular pH as well as the oxygen concentration decrease, which creates an acidic and hypoxic environment.

One of the key characterisitics of tumors is their fast growth, which in turn leads to a lack of oxygen, termed hypoxia (Yotnda et al., 2011). Hypoxia (Fig. 1) is a constantly evolving participant in overall tumor growth (Patel & Sant, 2016; Kim et al., 2009) and remains the predominant regulator of angiogenesis in the tumor microenvironment (Mittal et al., 2014). The actual physiological level of oxygen in healthy tissues ranges from 3-6 % (Tian & Bae, 2012), while that of tumors is approximately 1 % (McKeown, 2014), which can be an important factor to distinguish healthy tissues and tumors.

To overcome this oxygen limitation, tumors typically induce angiogenesis to generate its dedicated blood supply for oxygen and other nutrients. To do so, it secretes various growth factors, including vascular endothelial growth factor (VEGF). VEGF (Fig. 1) promotes growth of blood vessels and is regarded as constituent element of the tumor microenvironment (Mittal et al., 2014).

In addition, acidic extracellular pH (Fig. 1) is a major feature of tumor tissue due to lactate secretion from anaerobic glycolysis and CO2 from the pentose phosphate pathway (Kato et al., 2013). Studies on different tumor nodules in human patients reveal an average extracellular pH of 7.0, in contrast to the physiological pH of 7.4 (Tian & Bae, 2012).

Those factors that determine the nature of the tumor are considered by most therapeutic approaches to develop targeted therapies. Hypoxia, low pH and VEGF are three common characteristics of the tumor microenvironment. Therefore, we chose these conditions to control the expression of chimeric antigen receptor (CAR) in T cells by an AND gate.