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<!-- start of content --> | <!-- start of content --> | ||
<div class="igem_2017_content_wrapper"> | <div class="igem_2017_content_wrapper"> | ||
− | |||
<div style="text-align: center"> | <div style="text-align: center"> | ||
<h1 style="color:#DF6A6A">Contribution | <h1 style="color:#DF6A6A">Contribution | ||
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<hr width="20%" /> | <hr width="20%" /> | ||
</div> | </div> | ||
+ | <div class="content"> | ||
+ | |||
+ | <h2> | ||
+ | 1. Interlab measurement study | ||
+ | </h2> | ||
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+ | <p> | ||
+ | We have finished the interlab experiments and get lots of results in the page of interlab. | ||
+ | </p> | ||
− | < | + | <h2> |
− | + | 2. Contribution of new parts | |
− | + | </h2> | |
− | </ | + | |
− | + | ||
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− | <p> | + | <p> |
− | We have contributed 12 new biobricks for iGEM part registry and submitted 9 parts to iGEM headquarter.(Table 1) | + | We have contributed 12 new biobricks for iGEM part registry and submitted 9 parts to iGEM headquarter.(Table 1) |
− | </p | + | </p> |
− | + | ||
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− | < | + | <table style="border:3px #cccccc solid;" cellpadding="10" border='1';"font-size:18px";"font-family:Comic Sans MS"> |
− | < | + | <tr> |
− | < | + | <td style="background-color:#99c2ff">biobrick</td> |
− | + | <td style="background-color:#99c2ff">type</td> | |
− | </ | + | <td style="background-color:#99c2ff">name</td> |
− | </ | + | <td style="background-color:#99c2ff">description</td> |
− | </ | + | <td style="background-color:#99c2ff">designer</td> |
+ | <td style="background-color:#99c2ff">length</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td style="background-color:#ffe680"><a href="http://parts.igem.org/Part:BBa_K2354000">K2354000</a></td> | ||
+ | <td style="background-color:#ffe680">basic</td> | ||
+ | <td style="background-color:#ffe680">HRP</td> | ||
+ | <td style="background-color:#ffe680">Degrade Estrogen Disrupt Chemicals</td> | ||
+ | <td style="background-color:#ffe680">Chan, Wei-Jen</td> | ||
+ | <td style="background-color:#ffe680">927</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td style="background-color:#ffe680"><a href="http://parts.igem.org/Part:BBa_K2354001">K2354001</a></td> | ||
+ | <td style="background-color:#ffe680">basic</td> | ||
+ | <td style="background-color:#ffe680">Laccase BP</td> | ||
+ | <td style="background-color:#ffe680">Degrade Estrogen Disrupt Chemicals</td> | ||
+ | <td style="background-color:#ffe680">Chan, Wei-Jen</td> | ||
+ | <td style="background-color:#ffe680">1572</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td style="background-color:#ffe680"><a href="http://parts.igem.org/Part:BBa_K2354002">K2354002</a></td> | ||
+ | <td style="background-color:#ffe680">basic</td> | ||
+ | <td style="background-color:#ffe680">Laccase SC</td> | ||
+ | <td style="background-color:#ffe680">Degrade Estrogen Disrupt Chemicals</td> | ||
+ | <td style="background-color:#ffe680">Chan, Wei-Jen</td> | ||
+ | <td style="background-color:#ffe680">1539</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td style="background-color:#ffe680"><a href="http://parts.igem.org/Part:BBa_K2354003">K2354003</a></td> | ||
+ | <td style="background-color:#ffe680">basic</td> | ||
+ | <td style="background-color:#ffe680">Laccase TC</td> | ||
+ | <td style="background-color:#ffe680">Degrade Estrogen Disrupt Chemicals</td> | ||
+ | <td style="background-color:#ffe680">Chan, Wei-Jen</td> | ||
+ | <td style="background-color:#ffe680">1593</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td style="background-color:#ffe680"><a href="http://parts.igem.org/Part:BBa_K2354004">K2354004</a></td> | ||
+ | <td style="background-color:#ffe680">basic</td> | ||
+ | <td style="background-color:#ffe680">Laccase TV</td> | ||
+ | <td style="background-color:#ffe680">Degrade Estrogen Disrupt Chemicals</td> | ||
+ | <td style="background-color:#ffe680">Chan, Wei-Jen</td> | ||
+ | <td style="background-color:#ffe680">1557</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td style="background-color:#ffe680"><a href="http://parts.igem.org/Part:BBa_K2354005">K2354005</a></td></td> | ||
+ | <td style="background-color:#ffe680">basic</td> | ||
+ | <td style="background-color:#ffe680">monobody TV</td> | ||
+ | <td style="background-color:#ffe680">Bind to ER alpha when ER alpha is bind with EDCs</td> | ||
+ | <td style="background-color:#ffe680">Chan, Wei-Jen</td> | ||
+ | <td style="background-color:#ffe680">435</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td style="background-color:#ffe680"><a href="http://parts.igem.org/Part:BBa_K2354006">K2354006</a></td></td> | ||
+ | <td style="background-color:#ffe680">basic</td> | ||
+ | <td style="background-color:#ffe680">MNP TV</td> | ||
+ | <td style="background-color:#ffe680">Degrade Estrogen Disrupt Chemicals</td> | ||
+ | <td style="background-color:#ffe680">Chan, Wei-Jen</td> | ||
+ | <td style="background-color:#ffe680">1095</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td style="background-color:#ffe680"><a href="http://parts.igem.org/Part:BBa_K2354007">K2354007</a></td> | ||
+ | <td style="background-color:#ffe680">basic</td> | ||
+ | <td style="background-color:#ffe680">ER-alpha TV</td> | ||
+ | <td style="background-color:#ffe680">Bind to EDCs</td> | ||
+ | <td style="background-color:#ffe680">Chan, Wei-Jen</td> | ||
+ | <td style="background-color:#ffe680">759</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td style="background-color:#ffe680"><a href="http://parts.igem.org/Part:BBa_K2354008">K2354008</a></td> | ||
+ | <td style="background-color:#ffe680">basic</td> | ||
+ | <td style="background-color:#ffe680">monobody</td> | ||
+ | <td style="background-color:#ffe680">Bind to ER alpha when ER alpha is bind with EDCs</td> | ||
+ | <td style="background-color:#ffe680">Chan, Wei-Jen</td> | ||
+ | <td style="background-color:#ffe680">288</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td style="background-color:#ffe680"><a href="http://parts.igem.org/Part:BBa_K2354009">K2354009</a></td> | ||
+ | <td style="background-color:#ffe680">basic</td> | ||
+ | <td style="background-color:#ffe680">ER-alpha HS</td> | ||
+ | <td style="background-color:#ffe680">Bind to EDCs</td> | ||
+ | <td style="background-color:#ffe680">Chan, Wei-Jen</td> | ||
+ | <td style="background-color:#ffe680">897</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td style="background-color:#ffe680"><a href="http://parts.igem.org/Part:BBa_K2354010">K2354010</a></td> | ||
+ | <td style="background-color:#ffe680">composite</td> | ||
+ | <td style="background-color:#ffe680">monobody-GBP HS</td> | ||
+ | <td style="background-color:#ffe680">Bind to ER alpha when ER alpha is bind with EDCs and it can bind on the gold surface.</td> | ||
+ | <td style="background-color:#ffe680">Chan, Wei-Jen</td> | ||
+ | <td style="background-color:#ffe680">850</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td style="background-color:#ffe680"><a href="http://parts.igem.org/Part:BBa_K2354011">K2354011</a></td> | ||
+ | <td style="background-color:#ffe680">composite</td> | ||
+ | <td style="background-color:#ffe680">INP-ER-alpha HS </td> | ||
+ | <td style="background-color:#ffe680">Expression of ER-alpha on the membrane of <I>E. coli</I> and ER-alpha can bind to EDCs</td> | ||
+ | <td style="background-color:#ffe680">Chan, Wei-Jen</td> | ||
+ | <td style="background-color:#ffe680">2284</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td style="background-color:#ffe680"><a href="http://parts.igem.org/Part:BBa_K2354012">K2354012</a></td> | ||
+ | <td style="background-color:#ffe680">composite</td> | ||
+ | <td style="background-color:#ffe680">HRP-his tag</td> | ||
+ | <td style="background-color:#ffe680">Degrade Estrogen Disrupt Chemicals</td> | ||
+ | <td style="background-color:#ffe680">Chan, Wei-Jen</td> | ||
+ | <td style="background-color:#ffe680">1325</td> | ||
+ | </tr> | ||
+ | </table> | ||
− | <p> | + | <p><center><font size="2"> |
− | < | + | Table 1. the list of our 12 new parts |
− | + | </font></center></p> | |
− | </ | + | |
− | </ | + | |
− | < | + | |
− | < | + | <h2> |
− | + | 3. Validation of composite parts’ function | |
− | </ | + | </h2> |
− | + | ||
− | |||
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− | <p> | + | <p> |
− | + | We constructed three composite parts and all of their function have been validated: | |
− | </p | + | </p> |
− | + | ||
− | |||
− | |||
− | |||
− | |||
− | <p> | + | <p> |
− | ( | + | (1) |
− | <a href="http://parts.igem.org/Part: | + | <a href="http://parts.igem.org/Part:BBa_K2354010">Part:BBa_K2354010</a> |
− | : | + | :monobody-GBP HS |
− | </p> | + | </p> |
− | <p> | + | <p> |
− | <img src="https://static.igem.org/mediawiki/2017/ | + | <img src="https://static.igem.org/mediawiki/2017/7/71/T--NTHU_Taiwan--Parts--10.png"> |
− | </p | + | </p> |
− | + | ||
− | |||
− | |||
− | |||
− | |||
− | <p> | + | <p> |
− | + | Monobody was fused with gold binding protein and linked with 6×his tag. This fused protein can bind to the gold surface by the function of the gold-binding protein, and it can thus capture our ER-alpha/EDCs complex. | |
− | + | </p> | |
− | + | ||
− | </p> | + | |
− | |||
− | |||
− | |||
− | |||
− | <p> | + | <p> |
− | + | (2) | |
− | </ | + | <a href="http://parts.igem.org/Part:BBa_K2354011">Part:BBa_K2354011</a> |
− | < | + | :INP-ER-alpha HS |
+ | </p> | ||
− | </ | + | <p> |
− | </ | + | <img src="https://static.igem.org/mediawiki/2017/e/eb/T--NTHU_Taiwan--Parts--k11.png"> |
+ | </p> | ||
− | </ | + | <p> |
+ | ER-alpha was fused with ice nucleating protein. This fused protein can be anchored to the membrane of <I>E. coli</I> via the function of ice nucleating protein and ER-alpha can bind to EDCs for detection. | ||
+ | </p> | ||
− | |||
− | < | + | <p> |
+ | (3) | ||
+ | <a href="http://parts.igem.org/Part:BBa_K2354012">Part:BBa_K2354012</a> | ||
+ | :HRP-his tag | ||
+ | </p> | ||
− | // | + | <p> |
− | + | <img src="https://static.igem.org/mediawiki/2017/0/06/T--NTHU_Taiwan--Parts-k12.png"> | |
+ | </p> | ||
− | |||
− | + | <p> | |
+ | Horseradish peroxidase is one kind of peroxidase which uses heme as a cofactor, and it can degrade EDCs to the less toxic compounds. Moreover, we linked fused protein with 6×his tag for purification. | ||
+ | </p> | ||
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− | + | </div> | |
− | + | </div> | |
− | + | ||
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Revision as of 11:58, 31 October 2017
Contribution
1. Interlab measurement study
We have finished the interlab experiments and get lots of results in the page of interlab.
2. Contribution of new parts
We have contributed 12 new biobricks for iGEM part registry and submitted 9 parts to iGEM headquarter.(Table 1)
biobrick | type | name | description | designer | length |
K2354000 | basic | HRP | Degrade Estrogen Disrupt Chemicals | Chan, Wei-Jen | 927 |
K2354001 | basic | Laccase BP | Degrade Estrogen Disrupt Chemicals | Chan, Wei-Jen | 1572 |
K2354002 | basic | Laccase SC | Degrade Estrogen Disrupt Chemicals | Chan, Wei-Jen | 1539 |
K2354003 | basic | Laccase TC | Degrade Estrogen Disrupt Chemicals | Chan, Wei-Jen | 1593 |
K2354004 | basic | Laccase TV | Degrade Estrogen Disrupt Chemicals | Chan, Wei-Jen | 1557 |
K2354005 | basic | monobody TV | Bind to ER alpha when ER alpha is bind with EDCs | Chan, Wei-Jen | 435 |
K2354006 | basic | MNP TV | Degrade Estrogen Disrupt Chemicals | Chan, Wei-Jen | 1095 |
K2354007 | basic | ER-alpha TV | Bind to EDCs | Chan, Wei-Jen | 759 |
K2354008 | basic | monobody | Bind to ER alpha when ER alpha is bind with EDCs | Chan, Wei-Jen | 288 |
K2354009 | basic | ER-alpha HS | Bind to EDCs | Chan, Wei-Jen | 897 |
K2354010 | composite | monobody-GBP HS | Bind to ER alpha when ER alpha is bind with EDCs and it can bind on the gold surface. | Chan, Wei-Jen | 850 |
K2354011 | composite | INP-ER-alpha HS | Expression of ER-alpha on the membrane of E. coli and ER-alpha can bind to EDCs | Chan, Wei-Jen | 2284 |
K2354012 | composite | HRP-his tag | Degrade Estrogen Disrupt Chemicals | Chan, Wei-Jen | 1325 |
3. Validation of composite parts’ function
We constructed three composite parts and all of their function have been validated:
(1) Part:BBa_K2354010 :monobody-GBP HS
Monobody was fused with gold binding protein and linked with 6×his tag. This fused protein can bind to the gold surface by the function of the gold-binding protein, and it can thus capture our ER-alpha/EDCs complex.
(2) Part:BBa_K2354011 :INP-ER-alpha HS
ER-alpha was fused with ice nucleating protein. This fused protein can be anchored to the membrane of E. coli via the function of ice nucleating protein and ER-alpha can bind to EDCs for detection.
(3) Part:BBa_K2354012 :HRP-his tag
Horseradish peroxidase is one kind of peroxidase which uses heme as a cofactor, and it can degrade EDCs to the less toxic compounds. Moreover, we linked fused protein with 6×his tag for purification.