Difference between revisions of "Team:Nanjing-China/Model"

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<h3>★ ALERT! </h3>
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<p>This page is used by the judges to evaluate your team for the <a href="https://2017.igem.org/Judging/Medals">medal criterion</a> or <a href="https://2017.igem.org/Judging/Awards"> award listed above</a>. </p>
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<p> Delete this box in order to be evaluated for this medal criterion and/or award. See more information at <a href="https://2017.igem.org/Judging/Pages_for_Awards"> Instructions for Pages for awards</a>.</p>
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<h1> Modeling</h1>
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<p>Mathematical models and computer simulations provide a great way to describe the function and operation of BioBrick Parts and Devices. Synthetic Biology is an engineering discipline, and part of engineering is simulation and modeling to determine the behavior of your design before you build it. Designing and simulating can be iterated many times in a computer before moving to the lab. This award is for teams who build a model of their system and use it to inform system design or simulate expected behavior in conjunction with experiments in the wetlab.</p>
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<div id="HOME">
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<div class="sub">
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  <ul><li><a href="https://2017.igem.org/Team:Nanjing-China/Model">Model</a></ul></li></div>
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      <ul>
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    <li><a href="#ch2o">For CH<sub>2</sub>O</a></li>
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  <li><a href="#h2">For H<sub>2</sub>S</a></li>
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    <li><a href="#h2s">For H<sub>2</sub></a></li>
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  </ul>
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</div></div>
 
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<div class="column half_size">
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<h3> Gold Medal Criterion #3</h3>
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<p>
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To complete for the gold medal criterion #3, please describe your work on this page and fill out the description on your <a href="https://2017.igem.org/Judging/Judging_Form">judging form</a>. To achieve this medal criterion, you must convince the judges that your team has gained insight into your project from modeling. You may not convince the judges if your model does not have an effect on your project design or implementation.
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</p>
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<p>
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Please see the <a href="https://2017.igem.org/Judging/Medals"> 2017 Medals Page</a> for more information.
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<div class="container" align="center">
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<div class="column half_size">
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  <div class="header"><img src="https://static.igem.org/mediawiki/2017/e/e3/T-Nanjing-China-title.png" width="100%" onload="MM_effectAppearFade('menu', 4000, 0, 100, false)" />
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<h3>Best Model Special Prize</h3>
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<div id="menu">
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    <ul>
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<p>
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  <li><a href="https://2017.igem.org/Team:Nanjing-China">HOME</a>
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To compete for the <a href="https://2017.igem.org/Judging/Awards">Best Model prize</a>, please describe your work on this page  and also fill out the description on the <a href="https://2017.igem.org/Judging/Judging_Form">judging form</a>. Please note you can compete for both the gold medal criterion #3 and the best model prize with this page.  
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    <ul>
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<br><br>
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        <li><a href="https://2017.igem.org/Team:Nanjing-China">Introduction</a></li>
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You must also delete the message box on the top of this page to be eligible for the Best Model Prize.
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            <li><a href="https://2017.igem.org/Team:Nanjing-China/Background">Background</a></li>
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</p>
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</ul>
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    </li>
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    <li><a href="https://2017.igem.org/Team:Nanjing-China/CH2O">PARTS</a>
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    <ul>
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        <li><a href="https://2017.igem.org/Team:Nanjing-China/CH2O">CH<sub>2</sub>o</a></li>
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            <li><a href="https://2017.igem.org/Team:Nanjing-China/H2">H<sub>2</sub></a></li>
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          <li><a href="https://2017.igem.org/Team:Nanjing-China/H2S">H<sub>2</sub>S</a></li>
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</ul>
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    </li>
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    <li><a href="https://2017.igem.org/Team:Nanjing-China/Sliver">JUDGE</a>
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    <ul>
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        <li><a href="https://2017.igem.org/Team:Nanjing-China/Sliver">Sliver</a></li>
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            <li><a href="https://2017.igem.org/Team:Nanjing-China/Gold">Gold</a></li>
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</ul>
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      </li>
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    <li><a href="https://2017.igem.org/Team:Nanjing-China/Design">PROJECT</a>
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    <ul>
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        <li><a href="https://2017.igem.org/Team:Nanjing-China/Design">Design</a></li>
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                <li><a href="https://2017.igem.org/Team:Nanjing-China/Notebook">Notebook</a></li>
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                <li><a href="https://2017.igem.org/Team:Nanjing-China/Demonstrate">Demonstrate</a></li>
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            <li><a href="https://2017.igem.org/Team:Nanjing-China/Improvement">Improvement</a></li>
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</ul>
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        </li>
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        <li><a href="https://2017.igem.org/Team:Nanjing-China/TEAM/Introduction">TEAM</a>
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    <ul>
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        <li><a href="https://2017.igem.org/Team:Nanjing-China/TEAM/Introduction">Introduction</a></li>
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            <li><a href="https://2017.igem.org/Team:Nanjing-China/TEAM/Members">Members</a></li>
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                <li><a href="https://2017.igem.org/Team:Nanjing-China/TEAM/Attributions">Attributions</a></li>
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                <li><a href="https://2017.igem.org/Team:Nanjing-China/TEAM/Collaborations">Collaboration</a></li>
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</ul>
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    </li>
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    <li><a href="https://2017.igem.org/Team:Nanjing-China/Safty">OTHERS</a>
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    <ul>
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        <li><a href="https://2017.igem.org/Team:Nanjing-China/HP/Silver">Safety</a></li>
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            <li><a href="https://2017.igem.org/Team:Nanjing-China/Model">Model</a></li>
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                <li><a href="https://2017.igem.org/Team:Nanjing-China/HP/Gold_Integrated">HP</a></li>
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</ul>
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    </li>
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      </ul>
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  </div>
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    <div id="h2">
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      <div class="word">
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      <h1 align="center">H<sub>2</sub></h1>
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      <div align="left">
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      <p>Our cellular model develops on the  characterization of the hoxBC-hoxJ and hoxA regulation pathway as well as predicting  the behavior of our Hydrogen biosensor under its designed conditions, through  which we can learn more details about the procession of hoxBC-hoxJ and hoxA regulation  pathway[1]. <br />
 +
The main modelling environment utilized in  this project is the MATLAB SimBiology toolbox, a plugin designed specifically  for computational systems biology. SimBiology will be utilized with a  deterministic differential equation solver method. However in real life, there  is some degree of random variation in the quantities - this is where a  stochastic model would be useful. However, over a cell population these random  variations average out to give deterministic results.</p>
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      <div class="model">
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    <ul><li onclick="MM_swapImage('pageh2','','https://static.igem.org/mediawiki/2017/e/e9/T-Nanjing-China-model-h2-1.png',1)">1</li>
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  <div class="footer">
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<h5> Inspiration </h5>
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    <div align="center">
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<p>
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      <div class="f">
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Here are a few examples from previous teams:
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        <div class="f-word"><p><strong><u>Address</u></strong></p>
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</p>
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            <p>Life Science Department<br />
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<ul>
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              #163 Xianlin Blvd, Qixia District<br />
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<li><a href="https://2016.igem.org/Team:Manchester/Model">Manchester 2016</a></li>
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              Nanjing University<br />
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<li><a href="https://2016.igem.org/Team:TU_Delft/Model">TU Delft 2016 </li>
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              Nanjing, Jiangsu Province<br />
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<li><a href="https://2014.igem.org/Team:ETH_Zurich/modeling/overview">ETH Zurich 2014</a></li>
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              P.R. of China<br />
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<li><a href="https://2014.igem.org/Team:Waterloo/Math_Book">Waterloo 2014</a></li>
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              Zip: 210046
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</ul>
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            </p>
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            <p><strong><u>Email</u></strong></p>
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            <p>nanjing_china@163.com</p>
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            <p><strong><u>Social media</u></strong></p>
 +
            <p>Twitter button: <br/>
 +
            <a href="https://twitter.com/Guja1501">iGEM Nanjing-China@nanjing_china</a></p>
 +
        </div>
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        <div class="f-img">
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          <div align="center"><img src="https://static.igem.org/mediawiki/2017/0/04/T-Nanjing-China-%E5%8D%97%E4%BA%AC%E5%A4%A7%E5%AD%A6.png" name="img1" width="160" height="220" id="img1" onmouseover="MM_changeProp('img1','','width','180px','IMG');MM_changeProp('img1','','height','240px','IMG')" onmouseout="MM_changeProp('img1','','width','160px','IMG');MM_changeProp('img1','','height','220px','IMG')" /></div>
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        </div>
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          <div class="f-img">
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            <div align="right"><img src=" https://static.igem.org/mediawiki/2017/d/d4/T-Nanjing-China-%E5%9B%BE%E7%89%873.png
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          </div>
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          <div class="f-img">
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            <div align="center"><img src="https://static.igem.org/mediawiki/2017/3/37/T-Nanjing-China-s1.png" name="img3" width="160" height="160" id="img3"  onmouseover="MM_changeProp('img3','','width','180px','IMG');MM_changeProp('img3','','height','180px','IMG')" onmouseout="MM_changeProp('img3','','width','160px','IMG');MM_changeProp('img3','','height','160px','IMG')" align="absmiddle" /></div>
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Revision as of 11:11, 24 October 2017

Team:Nanjing-China - 2017.igem.org

H2

Our cellular model develops on the characterization of the hoxBC-hoxJ and hoxA regulation pathway as well as predicting the behavior of our Hydrogen biosensor under its designed conditions, through which we can learn more details about the procession of hoxBC-hoxJ and hoxA regulation pathway[1].
The main modelling environment utilized in this project is the MATLAB SimBiology toolbox, a plugin designed specifically for computational systems biology. SimBiology will be utilized with a deterministic differential equation solver method. However in real life, there is some degree of random variation in the quantities - this is where a stochastic model would be useful. However, over a cell population these random variations average out to give deterministic results.

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Address

Life Science Department
#163 Xianlin Blvd, Qixia District
Nanjing University
Nanjing, Jiangsu Province
P.R. of China
Zip: 210046

Email

nanjing_china@163.com

Social media

Twitter button:
iGEM Nanjing-China@nanjing_china