Difference between revisions of "Team:SJTU-Software/Improve"

(Prototype team page)
 
Line 1: Line 1:
 
{{SJTU-Software}}
 
{{SJTU-Software}}
−
<html>
+
<!DOCTYPE html>
 +
<html lang="en">
 +
<head>
 +
    <meta charset="utf-8" />
 +
    <meta http-equiv="X-UA-Compatible" content="IE=edge" />
 +
    <meta name="viewport" content="width=device-width, initial-scale=1" />
 +
    <meta name="description" content="Free Bootstrap Themes by Html5xCss3 dot com - Free Responsive Html5 Templates">
 +
    <meta name="author" content="#">
  
 +
    <title>SJTU-Software_Contribution</title>
  
−
<div class="column full_size judges-will-not-evaluate">
+
    <!-- Bootstrap Core CSS -->
−
<h3>★  ALERT! </h3>
+
    <link href="https://cdn.bootcss.com/bootstrap/3.3.5/css/bootstrap.min.css" rel="stylesheet">
−
<p>This page is used by the judges to evaluate your team for the <a href="https://2017.igem.org/Judging/Medals">medal criterion</a> or <a href="https://2017.igem.org/Judging/Awards"> award listed above</a>. </p>
+
<!-- Custom CSS -->
−
<p> Delete this box in order to be evaluated for this medal criterion and/or award. See more information at <a href="https://2017.igem.org/Judging/Pages_for_Awards"> Instructions for Pages for awards</a>.</p>
+
  <style type="text/css">
−
</div>
+
    /* ==== Google font ==== */
−
<div class="clear"></div>
+
    @charset "UTF-8";
 +
    @import url(http://fonts.googleapis.com/css?family=PT+Sans:700|Pacifico|Changa+One);
 +
    @import url('https://fonts.googleapis.com/css?family=Source+Sans+Pro:300,400,600,700,900');
 +
    @import url('https://fonts.googleapis.com/css?family=Playfair+Display:400,700,900');
 +
    @import url('https://fonts.googleapis.com/css?family=Montserrat:400,700,900');
 +
    /* ---------------------------------------------------------------------------- */
 +
    /* ------------------------------------Html-Body------------------------------- */
 +
    /* ---------------------------------------------------------------------------- */
 +
    body {font-family: 'Source Sans Pro', sans-serif;font-weight: 400;color: #666;background-color: #fff;font-size: 15px;line-height: 24px;hyphens: auto;overflow-wrap: break-word;}
 +
    html, body {width:100%; padding:0; margin:0;}
  
−
<div class="column full_size">
+
    /* ---------------------------------------------------------------------------- */
−
<h1>Improve</h1>
+
    /* ---------------------------------------------------------------------------- */
−
<p>For teams seeking to improve upon a previous part or project, you should document all of your work on this page. Please remember to include all part measurement and characterization data on the part page on the Regisrty. Please include a link to your improved part on this page.</p>
+
    /* ---------------------------------------------------------------------------- */
 +
    html { -webkit-text-size-adjust: none;}
 +
    .video embed,.video object,.video iframe { width: 100%;  height: auto;}
 +
    img{max-width:100%; height: auto;width: auto\9; /* ie8 */}
  
−
<h3>Gold Medal Criterion #2</h3>
+
    h1 {font-size: 38px;}
−
<p><b>Standard Tracks:</b> Improve the function of an existing BioBrick Part. The original part must NOT be from your 2017 part number range. If you change the original part sequence, you must submit a new part. In addition, both the new and original part pages must reference each other. This working part must be different from the part documented in bronze #4 and silver #1.
+
    h2 {font-size: 36px;}
 +
    h3 {font-size: 32px;}
 +
    h4 {font-size: 28px;}
 +
    h5 {font-size: 24px;}
 +
    h6 {font-size: 20px;}
  
−
<br><br>
+
    h1,h2,h3,h4,h5,h6 {font-weight: 700;color: #111;line-height: 1.1;font-family: 'Montserrat', sans-serif;}
−
<b>Special Tracks:</b> Improve the function of an existing iGEM project (that your current team did not originally create) and display your achievement on your wiki.</p>
+
  
 +
    p {margin: 0 0 20px;}
  
−
</div>
+
    a {color: #333;-webkit-transition: all .2s ease-in-out;-moz-transition: all .2s ease-in-out;transition: all .2s ease-in-out;}
 +
    a:hover,
 +
    a:focus {text-decoration: none;color:#EC495E;}
  
 +
    button {border: none;outline: 0;}
 +
    ul li{list-style: none;}
 +
    input:not([type]), input[type="color"], input[type="email"], input[type="number"], input[type="password"], input[type="tel"], input[type="url"], input[type="text"], input[type="search"], textarea, .form-control, select {
 +
        height: 40px;
 +
        padding-left: 20px;
 +
        border: 1px solid #ccc;
 +
        border-radius: 0;
 +
        box-shadow: none;
 +
        line-height: 22px;
 +
        letter-spacing: .5px;
 +
        -webkit-transition: border-color 0.5s;
 +
        transition: border-color 0.5s;
 +
    }
 +
    .form-control:focus, .form-control:hover {
 +
        outline: none;
 +
        box-shadow: none;
 +
        border-color: #666;
 +
    }
 +
    /* --Line-- */
 +
    hr.line { margin: 15px auto; padding: 0; max-width: 90px;border: 0; border-top: solid 5px #ddd;text-align: center;}
  
 +
    /* --Progress-- */
 +
    .progress{background-color: rgba(0, 0, 0, .3); height: 15px;box-shadow: none;}
 +
    .progress-bar{box-shadow: none;line-height: 15px;}
 +
    .progress-bar-light{background-color: #f2f2f2; color: #262626;}
 +
    .progress-bar-yellow {background-color: #333856;}
 +
    .progress-bar-dark {background-color: #262626;}
  
 +
    /* --no-gutter-- */
 +
    .no-gutter::after, .no-gutter::before {content: " ";display: table;}
 +
    .no-gutter::after {clear: both;}
 +
    .no-gutter{margin: 0 !important;}
 +
    .no-gutter > [class*=col-] {
 +
      padding-right: 0;
 +
      padding-left: 0;
 +
    }
 +
    .copyrights{
 +
      text-indent:-9999px;
 +
      height:0;
 +
      line-height:0;
 +
      font-size:0;
 +
      overflow:hidden;
 +
    }
 +
    /* --Socials-nav-- */
 +
    .social-link{text-align: center;}
 +
    .social-link li{}
 +
    .social-link li a{height: 37px; width: 37px;border-radius: 50%;display:block;color: #333;font-size: 19px;padding-top: 6px;border: 1px solid #333;background: #fff;}
 +
    .social-link li a:hover{background: transparent;color: #fff;border: 1px solid #fff;}
 +
 +
    /* --Page-- */
 +
    body.index-page {}
 +
    body.single-page {}
 +
    body.single-page .portfolio-box {max-width: 100%;margin: 20px 0;}
 +
 +
    body .wrap-body {
 +
      background-image: url(https://static.igem.org/mediawiki/2017/e/ea/SJTU-Software_background_darker.jpeg);
 +
      background-position: center center;
 +
      background-repeat: no-repeat;
 +
        background-attachment: fixed;
 +
        background-size: cover;
 +
      overflow: hidden;
 +
        position: relative;
 +
      height: 100%;
 +
    }
 +
 +
    /* ---------------------------------------------------------------------------- */
 +
    /* ------------------------------------Header---------------------------------- */
 +
    /* ---------------------------------------------------------------------------- */
 +
    #intro {font-family: "Changa One", cursive;font-weight: 400;position: relative;margin: 80px auto;width: 600px;font-size: 60px;text-align: center;color: rgba(255,255,255,0.7);}
 +
    #intro span {display: block;line-height: 1.3}
 +
 +
    .line-1 {position: relative;}
 +
    .line-1:before, .line-1:after {content: "";font-family: FontAwesome;position: relative;font-style: normal;font-weight: normal;text-decoration: inherit;font-size: 16px;margin: 0 30px;top: -5px;}
 +
    .line-2 {font-family: "Changa One", sans-serif;font-weight: 400;text-transform: uppercase;font-size: 90px;letter-spacing: 15px;margin: 0 0;}
 +
    .line-3 {font-family: "PT Sans", sans-serif;font-weight: 700;font-size: 16px;text-transform: uppercase;margin: 70px 0 0;position: relative;letter-spacing: 6px;}
 +
    .line-3:before, .line-3:after {content: " ";position: absolute;width: 50px;height: 5px;border-top: 1px solid #fff;border-bottom: 1px solid #fff;}
 +
    .line-3:before {margin: 7px 0 0 -60px;}
 +
    .line-3:after {margin: 7px 0 0 10px;}
 +
    .line-4 {position: relative;text-align: center;margin: 50px auto;display: block;font-size: 20px;}
 +
    .line-4 a {text-decoration: none;display: inline-block;text-align: left;color: #fff;}
 +
    .line-4 a:nth-child(1) {text-align: right;}
 +
    .line-4 a:nth-child(1):after {content: "";font-family: FontAwesome;font-style: normal;font-weight: normal;text-decoration: inherit;position: relative;font-size: 30px;text-align: center;width: 90%;top: 4px;margin: 0;padding: 0 20px;}
 +
 +
    @media(max-width:992px){
 +
      #intro{width: 500px;}
 +
      .line-1{font-size: 25px;}
 +
      .line-2{font-size: 80px;letter-spacing: 12px;}
 +
      .line-3{font-size: 14px;margin: 60px 0 0;letter-spacing: 4px;}
 +
      .line-3:before, .line-3:after {width: 40px;}
 +
      .line-3:before {margin: 5px 0 0 -50px;}
 +
      .line-3:after {margin: 5px 0 0 10px;}
 +
      .line-4{font-size: 18px;margin: 40px auto;}
 +
    }
 +
 +
    @media(max-width:767px){
 +
      #intro{width: 350px;}
 +
      .line-1{font-size: 20px;}
 +
      .line-2{font-size: 70px;letter-spacing: 10px;}
 +
      .line-3{font-size: 13px;margin: 50px 0 0;letter-spacing: 3px;}
 +
      .line-3:before, .line-3:after {width: 30px;}
 +
      .line-3:before {margin: 4px 0 0 -40px;}
 +
      .line-3:after {margin: 4px 0 0 10px;}
 +
      .line-4{font-size: 16px;margin: 30px auto;}
 +
    }
 +
 +
    @media(max-width:500px){
 +
      #intro{width: 250px;}
 +
      .line-1{font-size: 17px;}
 +
      .line-2{font-size: 50px;letter-spacing: 8px;}
 +
      .line-3{font-size: 12px;margin: 40px 0 0;letter-spacing: 3px;}
 +
      .line-3:before, .line-3:after {width: 20px;}
 +
      .line-3:before {margin: 4px 0 0 -30px;}
 +
      .line-3:after {margin: 4px 0 0 10px;}
 +
      .line-4{font-size: 15px;margin: 20px auto;}
 +
      .line-4 a:nth-child(1):after {font-size: 25px;}
 +
    }
 +
 +
    header.page-header{}
 +
 +
    /* ---------------------------------------------------------------------------- */
 +
    /* -------------------------------------Content-------------------------------- */
 +
    /* ---------------------------------------------------------------------------- */
 +
    #page-content{background: #fff;}
 +
 +
    /* ---HomePage--- */
 +
    .box-content {}
 +
 +
    .box-content.box-style-0{background-image: url(../images/patftern-white2.png); background-color: #fff;}
 +
    .box-content.box-style-1{background: url(../images/pattern-white.png) center center;background-size: cover; background-color: #fff;}
 +
    .box-content.box-style-2{background-image: url(../images/home-6.png);background-position: 80% top;background-repeat: no-repeat;background-color: #F8F9F1;}
 +
    .box-content.box-style-3{background: url(../images/ep_naturalblack.png) fixed center center;color:#fff;}
 +
 +
    /* ---Heading--- */
 +
    .heading{margin-bottom: 60px;position:relative;display:block; width: 100%;}
 +
    .heading h2{font-weight: 400;font-size: 55px;letter-spacing: 0px;line-height: 50px;text-transform: uppercase;}
 +
    .heading:after{position: absolute; content: "";width: 40px;height: 4px;background: #333856;left: 0;right: auto;bottom: -30px;}
 +
    .box-text.dark-style .heading:after{background: #fff;}
 +
    .box-text .t-right .heading:after{right: 0; left: auto;}
 +
    @media(max-width:767px){
 +
      .heading{margin-bottom: 40px;}
 +
      .heading h2{font-size: 48px;line-height: 45px;margin-top: 0;}
 +
      .heading:after{left: calc(50% - 20px);bottom: -20px;}
 +
      .box-text .t-right .heading:after{right: calc(50% - 20px); bottom: -20px;}
 +
    }
 +
 +
    @media(max-width:500px){
 +
      .heading h2{font-size: 43px;line-height: 40px;margin-top: 0;}
 +
    }
 +
 +
    /* ---------------------------------------------------------------------------- */
 +
    /* ------------------------------------Menu------------------------------------ */
 +
    /* ---------------------------------------------------------------------------- */
 +
    #menu {border-radius: 0;text-transform: uppercase;border: none;}
 +
 +
    #menu a.navbar-brand:hover{color: #fff;}
 +
    #menu .navbar-brand{margin: 0;height: auto;text-transform: uppercase;padding: 0px 18px;}
 +
    #menu .logo {}
 +
    #menu .dropdown-menu {background-color: #2B2D3F;border:none;border-radius: 0;}
 +
 +
    #menu .navbar-collapse{padding: 0;background: rgba(255, 255, 255, 0.2)}
 +
    #menu ul.nav .dropdown-menu li a{color: #fff;}
 +
    #menu ul.nav .dropdown-menu li a:hover{color: #ec495e;}
 +
    #menu .dropdown-inner {display: table;}
 +
    #menu .dropdown-inner ul {display: table-cell;}
 +
    #menu .dropdown-inner a {min-width: 160px;display: block;padding: 3px 20px;clear: both;line-height: 20px;color: #000;margin: 0 5px;}
 +
    #menu li.dropdown:hover>a, #menu li.dropdown:focus>a, #menu li.dropdown:active>a{color: #ec495e;background: none;}
 +
    .navbar{margin: 0;}
 +
    #menu ul.nav li{}
 +
    #menu ul.nav li a{padding: 18px 45px;color: #fff;letter-spacing: 2px;font-size: 14px;background-color: transparent;font-weight: 700;}
 +
    #menu ul.nav li.active a{background: #fff;color: #1e252d;}
 +
    #menu ul.nav li.dropdown a{}
 +
    #menu .nav > li > a:hover, #menu .nav > li > a:focus{color:#fff;background-color: rgba(255, 255, 255, 0.2);}
 +
 +
    #menu .btn-navbar {font-size: 20px;color: #FFF;padding: 4px 12px;float: right;border: 2px solid #fff;}
 +
 +
 +
    @media(max-width:767px) {
 +
      #menu{background: #1D2027;padding: 10px 0;}
 +
      #menu .navbar-brand {display: block;color: #fff;margin-top: 10px;}
 +
      #menu div.dropdown-inner > ul.list-unstyled {display: block;}
 +
      #menu .dropdown-inner a {width: 100%;color: #fff;}
 +
      #menu div.dropdown-menu {margin-left: 0 !important; padding-bottom: 10px;background-color: rgba(0, 0, 0, 0.1);}
 +
 +
      #heading{display: inline-block !important;color: #fff;font-weight: bold;font-size: 22px;margin: 10px 0 8px 15px;}
 +
    }
 +
 +
    /* ---------------------------------------------------------------------------- */
 +
    /* -------------------------------------Box 1---------------------------------- */
 +
    /* ---------------------------------------------------------------------------- */
 +
    .box-content.box-1 {}
 +
 +
    /* ---------------------------------------------------------------------------- */
 +
    /* -------------------------------------Box 2---------------------------------- */
 +
    /* ---------------------------------------------------------------------------- */
 +
    .box-content.box-2 {}
 +
 +
    /* ---------------------------------------------------------------------------- */
 +
    /* -------------------------------------Box 3---------------------------------- */
 +
    /* ---------------------------------------------------------------------------- */
 +
    .box-content.box-3 {}
 +
 +
 +
 +
 +
    /* ---Article--- */
 +
    article.single-post{padding-bottom: 0;}
 +
 +
    article{background: #ffffff; color: #3F3F3F; margin: 50px 0;border-bottom: 1px solid #e1e1e1;padding-bottom: 50px;}
 +
    article:last-child{border-bottom: none;}
 +
    article:after, article:before{clear: both; content: '\0020'; display: block; visibility: hidden; width: 0; height: 0;}
 +
    article .post-thumbnail-wrap {text-align: center;width: 100%;margin-bottom: 10px;}
 +
    article .post-thumbnail-wrap img {}
 +
    article h2.entry-title{font-size: 35px;margin: 20px 0 10px;font-weight: 300;}
 +
    article h2.entry-title a{color: #131313;}
 +
    article h2.entry-title a:hover{color: #555}
 +
 +
    article .entry-header{margin-bottom: 30px;}
 +
    article.single-post .entry-header{margin-bottom: 60px;}
 +
    article.single-post .entry-header h1.entry-title{font-size: 40px;line-height: 30px;letter-spacing: 2px;font-weight: 600;margin: 0;text-transform: uppercase;margin-bottom: 40px;line-height: 1.1}
 +
    article.single-post .entry-header h1.entry-title a {color: #575756;margin: 0;}
 +
    article .entry-title-blog a:hover {color: #628d7c;}
 +
 +
    article .entry-header .entry-meta{color: #777;font-size: 13px;}
 +
    article .entry-header .entry-meta a {color: #777;}
 +
    article .entry-header .entry-meta a:hover {color: #EC495E;}
 +
 +
    article .entry-content{margin-top: 30px;}
 +
    article.single-post .entry-content{ padding: 20px 100px;}
 +
 +
    article .entry-content p{color: #686868;}
 +
    article .entry-content blockquote {border-left: 3px solid #1c7791;margin: 0 50px;font-style: italic;color: #666;padding-left: 20px;}
 +
    article .entry-content ol {text-align: justify;margin: 10px 50px;list-style-type: circle;}
 +
 +
    .comments-are {padding:30px 20px; position: relative;}
 +
    .comments-are{border-top: 1px solid #e1e1e1;margin: 50px 0 ;}
 +
    .comments-are textarea {height:170px;}
 +
 +
    @media(max-width:767px){
 +
      article.single-post .entry-content{ padding: 20px 80px;}
 +
    }
 +
 +
    @media(max-width:500px){
 +
      article.single-post .entry-content{ padding: 10px 30px;font-size: 14px;}
 +
      article .entry-content p{}
 +
      article .entry-content blockquote {margin: 0;padding-left: 10px;}
 +
      article .entry-content ol {margin: 10px 0;}
 +
    }
 +
 +
    /* ---------------------------------------------------------------------------- */
 +
    /* ------------------------------------Footer---------------------------------- */
 +
    /* ---------------------------------------------------------------------------- */
 +
    footer{color: #fff;}
 +
    footer ul {padding: 0;margin-top: 10px;}
 +
    footer a {color: #fff;}
 +
    footer a:hover {color: #ddd;}
 +
 +
    footer .wrap-footer{background: #fff;}
 +
    footer .wrap-footer p{color: #fff !important; font-size: 16px !important;}
 +
 +
    footer .bottom-footer{padding: 40px 0 60px;font-weight: bold;}
 +
    footer .quicklinks{}
 +
    footer .quicklinks li{position: relative;padding-right: 20px;margin-right: 7px;}
 +
    footer .quicklinks li:last-child{padding-right: 0;margin-right: 0;}
 +
    footer .quicklinks li:last-child:after{display: none;}
 +
    footer .quicklinks li:after{position: absolute;bottom: 10px;right: 0;content: ""; height: 5px; width: 5px; background-color: #333856;}
 +
 +
    footer .contact-info{position:relative}
 +
 +
    footer .contact-info .show-info-link{display:inline-block;position:absolute;top:-50px;left:0;right:0;margin:0 auto;padding-left:25px;padding-right:25px;width:200px;height:50px;text-align:center;color:#111;background:#fff;opacity:0;visibility:hidden;-webkit-transition:opacity 0.5s, visibility 0.6s, top 0.5s;transition:opacity 0.5s, visibility 0.6s, top 0.5s;z-index:999}
 +
    footer .contact-info .show-info-link:hover{background:#ececec}
 +
    footer .contact-info .show-info-link:focus{text-decoration:none !important;border-bottom:none}
 +
 +
    footer .contact-info .show-info-link i{display:inline-block;padding-top:18px;padding-right:15px;}
 +
 +
    footer .contact-info .info-open{top:0;opacity:1;visibility:visible}
 +
    footer .contact-info .contact-info-wrapper{position:absolute;margin-bottom:0;padding:100px 60px 0 90px;top:0;left:0;width:100%;height:100%;background:rgba(15, 15, 15, 0.90);-webkit-transition:opacity 0.5s, visibility 0.6s;transition:opacity 0.5s, visibility 0.6s}
 +
    footer .contact-info .contact-info-wrapper ul{list-style:none;padding:0;margin:0;width:50%;float:left}
 +
    footer .contact-info .contact-info-wrapper ul li{display:block;margin-bottom:30px;padding:7px 0 7px 20px;border-left:1px solid #666}
 +
    footer .contact-info .contact-info-wrapper ul li .adr-heading{display:block;color:#ececec;font-size: 16px;}
 +
    footer .contact-info .contact-info-wrapper ul li .adr-info{font-size: 15px;letter-spacing:1.5px;text-transform:uppercase;color:#888}
 +
    footer .contact-info .contact-info-wrapper .show-map{display:block;position:absolute;bottom:100px;color:#ececec}
 +
    footer .contact-info .contact-info-wrapper .show-map i{display:inline-block;padding-top:18px;padding-right:15px; font-size: 22px;}
 +
    footer .contact-info .contact-info-wrapper .show-map:hover{color:#999}
 +
    footer .contact-info .contact-info-wrapper .show-map:focus{text-decoration:none}
 +
    footer .map-open{opacity:0;visibility:hidden}
 +
    /* .footer-contact .contact-form{padding:70px;} */
 +
    footer .contact-form .heading{}
 +
    footer .contact-form .form-group label {font-size: 13px;text-transform: uppercase;font-weight: 700;letter-spacing: 2px;color: #111;}
 +
 +
    @media(max-width:767px){
 +
      footer .contact-info .contact-info-wrapper ul {display: block;width: 100%;}
 +
    }
 +
 +
    @media(max-width:500px){
 +
      footer .contact-info .contact-info-wrapper {padding: 70px 30px 0 60px;}
 +
      footer .contact-info .contact-info-wrapper .show-map{bottom: 70px;}
 +
    }
 +
 +
    /* ---------------------------------------------------------------------------- */
 +
    /* ------------------------------Contact Form---------------------------------- */
 +
    /* ---------------------------------------------------------------------------- */
 +
    #contactForm{margin-top: 100px}
 +
    #contactForm textarea{height: 150px;}
 +
 +
    /* ---------------------------------------------------------------------------- */
 +
    /* ------------------------------Portfolio Box--------------------------------- */
 +
    /* ---------------------------------------------------------------------------- */
 +
    .portfolio-box {display: block;position: relative;margin: auto;overflow: hidden;max-width: 500px}
 +
 +
    /****** Zoom Effect ******/
 +
    .portfolio-box.zoom-effect .portfolio-box-caption{background: rgba(0, 0, 0,.45);}
 +
    .portfolio-box.zoom-effect img{-webkit-transition: 0.5s ease;transition: 0.5s ease;}
 +
    .portfolio-box:hover.zoom-effect img{-webkit-transform:scale(1.1); /* Safari and Chrome */-moz-transform:scale(1.1); /* Firefox */-ms-transform:scale(1.1); /* IE 9 */-o-transform:scale(1.1); /* Opera */transform:scale(1.1);}
 +
 +
    .portfolio-box .portfolio-box-caption {display: block;position: absolute;bottom: 0;width: 100%;height: 100%;text-align: center;color: #fff;-webkit-transition: all .35s;-moz-transition: all .35s;transition: all .35s;}
 +
    .portfolio-box .portfolio-box-caption .portfolio-box-caption-content {position: absolute;top: 50%;width: 100%;text-align: center;transform: translateY(-50%);}
 +
 +
    .portfolio-box .portfolio-box-caption .portfolio-box-caption-content .project-social,
 +
    .portfolio-box .portfolio-box-caption .portfolio-box-caption-content .project-category,
 +
    .portfolio-box .portfolio-box-caption .portfolio-box-caption-content .project-name {padding: 0 15px;text-transform: uppercase;font-weight: 600;letter-spacing: 2px;}
 +
    .portfolio-box .portfolio-box-caption .portfolio-box-caption-content .project-category {font-size: 13px;color: #333856;margin-bottom: 10px;}
 +
    .portfolio-box .portfolio-box-caption .portfolio-box-caption-content .project-name {font-size: 16px;margin-bottom: 3px;}
 +
    .portfolio-box .portfolio-box-caption .portfolio-box-caption-content .project-social{transition: all 1s ease;opacity: 0; height: 0;overflow: hidden;}
 +
    .portfolio-box .portfolio-box-caption .portfolio-box-caption-content .project-social i.fa{font-size: 25px;}
 +
    .portfolio-box .portfolio-box-caption .portfolio-box-caption-content .project-social ul li{margin: 20px 5px 0;}
 +
    .portfolio-box .portfolio-box-caption .portfolio-box-caption-content .project-social ul li a{display: block;width: 48px;height: 48px;color: #333856;background: #fff;transition-duration: 0.3s;padding-top: 12px;border-radius: 50%;text-shadow: none;}
 +
    .portfolio-box .portfolio-box-caption .portfolio-box-caption-content .project-social ul li a:hover{color: #fff;background-color: #333856;}
 +
 +
    .portfolio-box:hover .portfolio-box-caption {opacity: 1;background: none;}
 +
    .portfolio-box:hover .portfolio-box-caption .portfolio-box-caption-content .project-social{opacity: 1;height: auto;}
 +
    .portfolio-box:hover .portfolio-box-caption .portfolio-box-caption-content .project-category,
 +
    .portfolio-box:hover .portfolio-box-caption .portfolio-box-caption-content .project-name{display: none;}
 +
 +
    @media(min-width:768px) {
 +
        .portfolio-box .portfolio-box-caption .portfolio-box-caption-content .project-category {font-size: 15px;}
 +
        .portfolio-box .portfolio-box-caption .portfolio-box-caption-content .project-name {font-size: 19px;}
 +
    }
 +
 +
    /* ---------------------------------------------------------------------------- */
 +
    /* ------------------------------------Button---------------------------------- */
 +
    /* ---------------------------------------------------------------------------- */
 +
    .btn {border-radius: 0;outline: none;text-decoration: none;text-transform: uppercase;font-weight: bold;box-shadow: none;border: none;}
 +
    .btn:focus,
 +
    .btn.active,
 +
    .btn:active {background-image: none;box-shadow: none;outline: 0 none;}
 +
 +
    .btn-skin {padding: 11px 22px;color: #1a1c1e;border: 2px solid #1a1c1e;font-size: 15px; letter-spacing: 2.3px;font-weight: 700;background: #fff;margin: 10px 0;}
 +
    .btn-skin i.fa{padding-left: 5px;}
 +
    .btn-skin:hover, .btn-skin:focus {color: #fff;background-color: #1a1c1e;}
 +
 +
    @media (max-width: 500px){
 +
      .btn-skin {padding: 8px 20px;font-size: 14px; letter-spacing: 1.8px;font-weight: 600}
 +
    }
 +
 +
    /* ---------------------------------------------------------------------------- */
 +
    /* -----------------------------------Success---------------------------------- */
 +
    /* ---------------------------------------------------------------------------- */
 +
    .success{height: 500px;width: 100%;text-transform: uppercase;}
 +
    .success-insite {position: relative;top: 50%;left: 50%;transform: translate(-50%, -50%);}
 +
    .success span.fail{font-size: 50px; color: red;display: block;line-height: 55px;}
 +
    .success span.success{font-size: 50px; color: blue;display: block;line-height: 55px;}
 +
    .success .btn-skin{margin-top: 50px}
 +
 +
    /* ---------------------------------------------------------------------------- */
 +
    /* ----------------------------------Margin------------------------------------ */
 +
    /* ---------------------------------------------------------------------------- */
 +
    .m-top10 { margin-top: 10px;}
 +
    .m-top15 { margin-top: 15px;}
 +
    .m-top20 { margin-top: 20px;}
 +
    .m-top30 { margin-top: 30px;}
 +
    .m-top50 { margin-top: 50px;}
 +
    .m-top80 { margin-top: 100px;}
 +
    .m-top100 { margin-top: 80px;}
 +
    .m-top120 { margin-top: 120px;}
 +
 +
    .m-bot10 { margin-bottom: 10px;}
 +
    .m-bot15 { margin-bottom: 15px;}
 +
    .m-bot20 { margin-bottom: 20px;}
 +
    .m-bot30 { margin-bottom: 30px;}
 +
    .m-bot50 { margin-bottom: 50px;}
 +
    .m-bot80 { margin-bottom: 80px;}
 +
    .m-bot120 { margin-bottom: 120px;}
 +
 +
    .pd-exlarge-xs{padding: 100px 90px;}
 +
    .pd-large-xs{padding: 80px 70px;}
 +
    .pd-medium-xs{padding: 60px 50px;}
 +
    .pd-small-xs{padding: 40px 30px;}
 +
 +
    @media only screen and (min-width: 768px) {
 +
        .pd-exlarge-sm{padding: 100px 90px;}
 +
      .pd-large-sm{padding: 80px 70px;}
 +
      .pd-medium-sm{padding: 60px 50px;}
 +
      .pd-small-sm{padding: 40px 30px;}
 +
    }
 +
    @media only screen and (min-width: 992px) {
 +
        .pd-exlarge-md{padding: 100px 90px;}
 +
      .pd-large-md{padding: 80px 70px;}
 +
      .pd-medium-md{padding: 60px 50px;}
 +
      .pd-small-md{padding: 40px 30px;}
 +
    }
 +
    @media only screen and (min-width: 1200px) {
 +
        .pd-exlarge-lg{padding: 100px 90px;}
 +
      .pd-large-lg{padding: 80px 70px;}
 +
      .pd-medium-lg{padding: 60px 50px;}
 +
      .pd-small-lg{padding: 40px 30px;}
 +
    }
 +
 +
    /* ---------------------------------------------------------------------------- */
 +
    /* --------------------------------Triangle------------------------------------ */
 +
    /* ---------------------------------------------------------------------------- */
 +
    .triangle-left,
 +
    .triangle-right{position: relative;}
 +
 +
    .triangle-left::before {border-bottom: 30px solid transparent;border-right: 30px solid #fff;border-top: 30px solid transparent;content: " ";height: 0;width: 0;left: -30px;position: absolute;top: calc(50% - 30px);}
 +
    .triangle-right::before {border-bottom: 30px solid transparent;border-left: 30px solid #fff;border-top: 30px solid transparent;content: " ";height: 0;width: 0;position: absolute;right: -30px;top: calc(50% - 30px);}
 +
    @media (max-width: 767px){
 +
      .triangle-left::before {left: calc(50% - 30px);top: -45px;transform: rotate(90deg);}
 +
      .triangle-right::before {right: calc(50% - 30px);position: absolute;top: -45px;transform: rotate(-90deg);}
 +
    }
 +
 +
    /* ---------------------------------------------------------------------------- */
 +
    /* --------------------------------Flex-Box------------------------------------ */
 +
    /* ---------------------------------------------------------------------------- */
 +
    .flex-box .box-text,
 +
    .flex-box .box-image {background-repeat: no-repeat;background-position: center center;background-size: cover;display: block;width: 100%;height: 100%;}
 +
 +
    /* Box Text */
 +
    .flex-box .box-text {-moz-justify-content: center;-webkit-justify-content: center;-ms-justify-content: center;justify-content: center;-moz-align-items: center;-webkit-align-items: center;-ms-align-items: center;align-items: center;/* display: flex; */}
 +
    .flex-box .box-text .box-text-inner{margin: 0 auto;max-width: 100%;}
 +
    .flex-box .box-text .box-text-inner p{font-size: 18px;font-weight: 300;color: #000;}
 +
    .flex-box .box-text .title {}
 +
    .flex-box .box-text .title h3{font-weight: 700;color: #000;text-transform: uppercase;font-family: 'Playfair Display', serif;letter-spacing: 3px;}
 +
    .flex-box .box-text .title span{font-size: 24px; font-weight:800;color: #000;text-transform: uppercase;margin: 40px 0 20px;display: block;}
 +
 +
    .flex-box .box-text.light-style{background: #fff;}
 +
    .flex-box .box-text.light-style .title h3{}
 +
    .flex-box .box-text.dark-style{background: #262626; color: #bbb;}
 +
    .flex-box .box-text.dark-style p{color: #ddd;}
 +
    .flex-box .box-text.dark-style .title h3{color: #333856;}
 +
    .flex-box .box-text.dark-style .heading h2{color: #fff;}
 +
    .flex-box .box-text.dark-style .social-link li a{color: #f2f2f2;border: 1px solid #f2f2f2;}
 +
    .flex-box .box-text.dark-style .social-link li a:hover{color: #000;border: 1px solid #333856;}
 +
 +
    /* Box Image */
 +
    .flex-box .box-image {width: 100%;height: 100%;display: inline-block;position: relative;}
 +
    .flex-box .box-image img {position: absolute;display: block;border-radius: 0;}
 +
    /* For browsers that support 'object-fit' */
 +
    @supports ( object-fit: cover ) {
 +
      .flex-box .box-image img {
 +
        -moz-object-fit: cover;
 +
        -webkit-object-fit: cover;
 +
        -ms-object-fit: cover;
 +
        -o-object-fit: cover;
 +
        object-fit: cover;
 +
        -moz-object-position: center;
 +
        -webkit-object-position: center;
 +
        -ms-object-position: center;
 +
        object-position: center;
 +
        -ms-transform: none;
 +
        -moz-transform: none;
 +
        -webkit-transform: none;
 +
        transform: none;
 +
        top: 0;
 +
        left: 0;
 +
        width: 100%;
 +
        height: 100%;
 +
      }
 +
    }
 +
    @media(min-width:768px){
 +
      .flex-box {-moz-align-items: stretch;-webkit-align-items: stretch;-ms-align-items: stretch;align-items: stretch;display: -moz-flex;display: -webkit-flex;display: -ms-flex;display: flex;-moz-flex-direction: row;-webkit-flex-direction: row;-ms-flex-direction: row;flex-direction: row;position: relative;overflow: hidden;}
 +
      .flex-box .f-right{order: 2;}
 +
      .box-text .t-right{text-align: right;}
 +
    }
 +
    @media(max-width:767px){
 +
      .flex-box .box-text{text-align: center;}
 +
      .flex-box .box-image {height: 400px;width: 100%;}
 +
    }
 +
    @media(max-width:500px){
 +
      .flex-box .box-text .box-text-inner p{font-size: 15px;}
 +
    }
 +
  </style>
 +
 +
 +
  <style type="text/css">
 +
    /* Preload images */
 +
    body:after {
 +
      content: url(../images/close.png) url(../images/loading.gif) url(../images/prev.png) url(../images/next.png);
 +
      display: none;
 +
    }
 +
 +
    .lightboxOverlay {
 +
      position: absolute;
 +
      top: 0;
 +
      left: 0;
 +
      z-index: 9999;
 +
      background-color: black;
 +
      filter: progid:DXImageTransform.Microsoft.Alpha(Opacity=80);
 +
      opacity: 0.8;
 +
      display: none;
 +
    }
 +
 +
    .lightbox {
 +
      position: absolute;
 +
      left: 0;
 +
      width: 100%;
 +
      z-index: 10000;
 +
      text-align: center;
 +
      line-height: 0;
 +
      font-weight: normal;
 +
    }
 +
 +
    .lightbox .lb-image {
 +
      display: block;
 +
      height: auto;
 +
      max-width: inherit;
 +
      -webkit-border-radius: 3px;
 +
      -moz-border-radius: 3px;
 +
      -ms-border-radius: 3px;
 +
      -o-border-radius: 3px;
 +
      border-radius: 3px;
 +
    }
 +
 +
    .lightbox a img {
 +
      border: none;
 +
    }
 +
 +
    .lb-outerContainer {
 +
      position: relative;
 +
      background-color: white;
 +
      *zoom: 1;
 +
      width: 250px;
 +
      height: 250px;
 +
      margin: 0 auto;
 +
      -webkit-border-radius: 4px;
 +
      -moz-border-radius: 4px;
 +
      -ms-border-radius: 4px;
 +
      -o-border-radius: 4px;
 +
      border-radius: 4px;
 +
    }
 +
 +
    .lb-outerContainer:after {
 +
      content: "";
 +
      display: table;
 +
      clear: both;
 +
    }
 +
 +
    .lb-container {
 +
      padding: 4px;
 +
    }
 +
 +
    .lb-loader {
 +
      position: absolute;
 +
      top: 43%;
 +
      left: 0;
 +
      height: 25%;
 +
      width: 100%;
 +
      text-align: center;
 +
      line-height: 0;
 +
    }
 +
 +
    .lb-cancel {
 +
      display: block;
 +
      width: 32px;
 +
      height: 32px;
 +
      margin: 0 auto;
 +
      background: url(../images/loading.gif) no-repeat;
 +
    }
 +
 +
    .lb-nav {
 +
      position: absolute;
 +
      top: 0;
 +
      left: 0;
 +
      height: 100%;
 +
      width: 100%;
 +
      z-index: 10;
 +
    }
 +
 +
    .lb-container > .nav {
 +
      left: 0;
 +
    }
 +
 +
    .lb-nav a {
 +
      outline: none;
 +
      background-image: url('data:image/gif;base64,R0lGODlhAQABAPAAAP///wAAACH5BAEAAAAALAAAAAABAAEAAAICRAEAOw==');
 +
    }
 +
 +
    .lb-prev, .lb-next {
 +
      height: 100%;
 +
      cursor: pointer;
 +
      display: block;
 +
    }
 +
 +
    .lb-nav a.lb-prev {
 +
      width: 34%;
 +
      left: 0;
 +
      float: left;
 +
      background: url(../images/prev.png) left 48% no-repeat;
 +
      filter: progid:DXImageTransform.Microsoft.Alpha(Opacity=0);
 +
      opacity: 0;
 +
      -webkit-transition: opacity 0.6s;
 +
      -moz-transition: opacity 0.6s;
 +
      -o-transition: opacity 0.6s;
 +
      transition: opacity 0.6s;
 +
    }
 +
 +
    .lb-nav a.lb-prev:hover {
 +
      filter: progid:DXImageTransform.Microsoft.Alpha(Opacity=100);
 +
      opacity: 1;
 +
    }
 +
 +
    .lb-nav a.lb-next {
 +
      width: 64%;
 +
      right: 0;
 +
      float: right;
 +
      background: url(../images/next.png) right 48% no-repeat;
 +
      filter: progid:DXImageTransform.Microsoft.Alpha(Opacity=0);
 +
      opacity: 0;
 +
      -webkit-transition: opacity 0.6s;
 +
      -moz-transition: opacity 0.6s;
 +
      -o-transition: opacity 0.6s;
 +
      transition: opacity 0.6s;
 +
    }
 +
 +
    .lb-nav a.lb-next:hover {
 +
      filter: progid:DXImageTransform.Microsoft.Alpha(Opacity=100);
 +
      opacity: 1;
 +
    }
 +
 +
    .lb-dataContainer {
 +
      margin: 0 auto;
 +
      padding-top: 5px;
 +
      *zoom: 1;
 +
      width: 100%;
 +
      -moz-border-radius-bottomleft: 4px;
 +
      -webkit-border-bottom-left-radius: 4px;
 +
      border-bottom-left-radius: 4px;
 +
      -moz-border-radius-bottomright: 4px;
 +
      -webkit-border-bottom-right-radius: 4px;
 +
      border-bottom-right-radius: 4px;
 +
    }
 +
 +
    .lb-dataContainer:after {
 +
      content: "";
 +
      display: table;
 +
      clear: both;
 +
    }
 +
 +
    .lb-data {
 +
      padding: 0 4px;
 +
      color: #ccc;
 +
    }
 +
 +
    .lb-data .lb-details {
 +
      width: 85%;
 +
      float: left;
 +
      text-align: left;
 +
      line-height: 1.1em;
 +
    }
 +
 +
    .lb-data .lb-caption {
 +
      font-size: 13px;
 +
      font-weight: bold;
 +
      line-height: 1em;
 +
    }
 +
 +
    .lb-data .lb-number {
 +
      display: block;
 +
      clear: left;
 +
      padding-bottom: 1em;
 +
      font-size: 12px;
 +
      color: #999999;
 +
    }
 +
 +
    .lb-data .lb-close {
 +
      display: block;
 +
      float: right;
 +
      width: 30px;
 +
      height: 30px;
 +
      background: url(../images/close.png) top right no-repeat;
 +
      text-align: right;
 +
      outline: none;
 +
      filter: progid:DXImageTransform.Microsoft.Alpha(Opacity=70);
 +
      opacity: 0.7;
 +
      -webkit-transition: opacity 0.2s;
 +
      -moz-transition: opacity 0.2s;
 +
      -o-transition: opacity 0.2s;
 +
      transition: opacity 0.2s;
 +
    }
 +
 +
    .lb-data .lb-close:hover {
 +
      cursor: pointer;
 +
      filter: progid:DXImageTransform.Microsoft.Alpha(Opacity=100);
 +
      opacity: 1;
 +
    }
 +
  </style>
 +
 +
<!-- Custom Fonts -->
 +
  <link href="https://cdn.bootcss.com/font-awesome/4.6.3/css/font-awesome.min.css" rel="stylesheet">
 +
  <link href="font-awesome/css/font-awesome.min.css" rel="stylesheet" type="text/css">
 +
 +
 +
<!-- HTML5 Shim and Respond.js IE8 support of HTML5 elements and media queries -->
 +
    <!-- WARNING: Respond.js doesn't work if you view the page via file:// -->
 +
    <!--[if lt IE 9]>
 +
        <script src="js/html5shiv.js"></script>
 +
        <script src="js/respond.min.js"></script>
 +
    <![endif]-->
 +
</head>
 +
<body class="single-page">
 +
<div class="wrap-body">
 +
<!-- Intro -->
 +
<div id="intro">
 +
<span class="line-1">SJTU</span>
 +
<span class="line-2">Software</span>
 +
<span class="line-3">BiobrickAssist Technology</span>
 +
 +
</div>
 +
 +
<header id="page-header">
 +
<!--Navigation-->
 +
<nav id="menu" class="navbar">
 +
<div class="container">
 +
<div class="row">
 +
<div class="navbar-header"><span id="heading" class="visible-xs">Categories</span>
 +
  <button type="button" class="btn btn-navbar navbar-toggle" data-toggle="collapse" data-target=".navbar-ex1-collapse"><i class="fa fa-bars"></i></button>
 +
</div>
 +
<div class="collapse navbar-collapse navbar-ex1-collapse">
 +
<ul class="nav navbar-nav">
 +
<li><a href="https://2017.igem.org/Team:SJTU-Software">Home</a></li>
 +
 +
              <li class="dropdown">
 +
                <a href="#" class="dropdown-toggle" data-toggle="dropdown">
 +
                    Team <b class="caret"></b>
 +
                </a>
 +
                <ul class="dropdown-menu">
 +
                    <li><a href="https://2017.igem.org/Team:SJTU-Software/Team">Team</a></li>
 +
                    <li><a href="https://2017.igem.org/Team:SJTU-Software/Collaborations">Collaborations</a></li>
 +
                </ul>
 +
            </li>
 +
 +
            <li class="dropdown">
 +
                <a href="#" class="dropdown-toggle" data-toggle="dropdown">
 +
                    Project <b class="caret"></b>
 +
                </a>
 +
                <ul class="dropdown-menu">
 +
                    <li><a href="https://2017.igem.org/Team:SJTU-Software/Description">Description</a></li>
 +
                    <li><a href="https://2017.igem.org/Team:SJTU-Software/Design">Design</a></li>
 +
                    <li><a href="https://2017.igem.org/Team:SJTU-Software/Notebook">Notebook</a></li>
 +
                    <li><a href="https://2017.igem.org/Team:SJTU-Software/Contribution">Contribution</a></li>
 +
                    <li><a href="https://2017.igem.org/Team:SJTU-Software/Improve">Improve</a></li>
 +
                    <li><a href="https://2017.igem.org/Team:SJTU-Software/Attributions">Attributions</a></li>
 +
                </ul>
 +
            </li>
 +
 +
            <li class="dropdown">
 +
              <a href="#" class="dropdown-toggle" data-toggle="dropdown">
 +
                  Human Practice <b class="caret"></b>
 +
              </a>
 +
              <ul class="dropdown-menu">
 +
                  <li><a href="https://2017.igem.org/Team:SJTU-Software/HP/Silver">Silver HP</a></li>
 +
                  <li><a href="https://2017.igem.org/Team:SJTU-Software/HP/Gold_Integrated">Integrated and Gold</a></li>
 +
                  <li><a href="https://2017.igem.org/Team:SJTU-Software/Engagement">Public Engagement</a></li>
 +
              </ul>
 +
          </li>
 +
 +
<li><a href="single.html">Awards</a></li>
 +
 +
</ul>
 +
</div>
 +
</div>
 +
</div>
 +
</nav>
 +
</header>
 +
 +
<!-- /////////////////////////////////////////Content -->
 +
<div id="page-content" class="container">
 +
<div class="row">
 +
<!-----------------Content-------------------->
 +
<section class="box-content box-2 box-style-0">
 +
<div class="flex-box no-gutter">
 +
<div class="col-sm-12">
 +
<div class="box-text">
 +
<div class="box-text-inner pd-exlarge-lg pd-small-xs">
 +
<div class="heading">
 +
<h2>Improve</h2>
 +
</div>
 +
 +
                  <p>
 +
                    Since the idea of our project this year (BAT, BiobrickAssist Technology) mainly originated in BASE,
 +
                    a biobrick evaluation tool that SJTU-Software programmed in 2015, we have surveyed and tested it in detail and found several shortcomings of its design and performance.
 +
                    While with the main function of evaluation for biobricks working quite well, and we’d like to set up an evaluation system like BASE, we decided to improve BASE for our project.
 +
                    However, due to its poor scalability, we programmed our web-based application under a new framework with Node.js.
 +
                  </p>
 +
 +
                  <b>We improved BASE both on database and function.</b>
 +
 +
                  <p>
 +
                    First of all, we noticed the database we used in 2015 was out of date, and the data stored was not sufficient for our further improvement of evaluation function. Therefore it may contain wrong information for biobricks. Fortunately we had a chance to discuss with USTC-Software about how to filter bad or even wrong data from the very beginning, that is, we collected new data this year from the official site http://parts.igem.org/ and immediately cut off bad data roughly following the advice of our PI and USTC-Software. Besides, some columns in MySQL database may not be so frequently used and influence little on scoring process (with a less weight), so we deleted them and put more weight on other factors such as submission time. Driven by Node.js’s MySQL pool, the database was accessed more easily and quickly.
 +
                  </p>
 +
 +
                  <p>
 +
                    At least so far our algorithm running on machine is hard to defeat human’s insight and knowledge, therefore we developed BAT Q/A Community. It’s not only a scalable plugin tied to the main evaluation and search function, but also a indispensable part of BAT, in which users can put forward and answer questions about biobricks, synthetic biology and even the work in the lab. This idea came from our project iMAP in 2016. We have surveyed and noticed that the instant messaging function we developed in 2016 could hardly replace existing ones such as QQ/Wechat, LINE and WhatsApp, and additionally not everyone got used to sending instant messages for academic communication, so email, or a platform like Quora was more suitable for knowledge and information exchange. Users can also search questions by keyword or browse them by categories or tags. Maybe if the algorithm goes wrong, or performs weird compared to our knowledge on synthetic biology or even common sense, users can go to Q/A Community to seek detailed discussion about their interested biobricks and report bugs of our application. So Q/A Community can be the reinforcement of our evaluation system. We evaluate both automatically and manually.
 +
                  </p>
 +
 +
                  <p>
 +
                    BASE could evaluate a biobrick at part and device level. In ordered to evaluate at higher level, we also improved its core function. We collected more data about biobricks at system level, and merged them into our MySQL database. However, the warning is that the evaluating process may lack accuracy because the additional data about biobricks at system level is too little. The core scoring algorithm is similar but we re-coded it in JavaScript (Node.js) instead of Perl, which can work better if our site has larger visitor volume and combine better with the frontend code (using framework like React.js and Vue.js).
 +
                  </p>
 +
 +
 +
</div>
 +
</div>
 +
</div>
 +
</div>
 +
</section>
 +
</div>
 +
</div>
 +
<footer id="page-footer" class="footer-contact">
 +
<div class="wrap-footer container">
 +
<div class="row">
 +
<div class="flex-box no-gutter">
 +
<!-- Map and address -->
 +
<div class="col-lg-12">
 +
<div class="contact-info">
 +
<!-- Show Info Button -->
 +
<a href="#" class="show-info-link"><i class="fa fa-info"></i> Show info</a>
 +
<div id="map" style="height: 550px;"></div>
 +
<address class="contact-info-wrapper">
 +
<ul class="list-unstyled">
 +
<!-- Address -->
 +
<li class="contact-group">
 +
  <span class="adr-heading">Address</span>
 +
  <span class="adr-info">No. 800 Dongchuan Road, Minhang District, Shanghai, China</span>
 +
</li>
 +
<!-- Email -->
 +
<li class="contact-group">
 +
  <span class="adr-heading">Contact Us</span>
 +
  <span class="adr-info">dcclogin@126.com</span>
 +
</li>
 +
</ul>
 +
</address>
 +
</div>
 +
</div>
 +
</div>
 +
</div>
 +
</div>
 +
<div class="bottom-footer">
 +
<div class="container">
 +
<div class="row">
 +
 +
</div>
 +
</div>
 +
</div>
 +
</footer><!-- Footer -->
 +
 +
 +
</div><!-- .wrap-body -->
 +
 +
 +
<!-- jQuery and Plugin-->
 +
<script src="js/lightbox-plus-jquery.min.js"></script>
 +
  <script src="https://cdn.bootcss.com/jquery/3.2.1/jquery.min.js"></script>
 +
<!--<script src="js/jquery-3.2.1.min.js"></script>-->
 +
<script src="js/main.js"></script>
 +
<!-- Bootstrap JS -->
 +
  <script src="https://cdn.bootcss.com/bootstrap/3.3.5/js/bootstrap.min.js"></script>
 +
<!--<script src="js/bootstrap.min.js"></script>-->
 +
<!-- Google Map -->
 +
  <script src="https://maps.googleapis.com/maps/api/js?key=AIzaSyB7V-mAjEzzmP6PCQda8To0ZW_o3UOCVCE&callback=initMap" async defer></script>
 +
<!-- Logo -->
 +
<!--<script src="js/arctext.min.js"></script>-->
 +
<script>
 +
$(document).ready(function() {
 +
  $(".line-2").arctext({radius: 400});
 +
});
 +
</script>
 +
 +
</body>
 
</html>
 
</html>

Revision as of 20:57, 27 October 2017

<!DOCTYPE html> SJTU-Software_Contribution
SJTU Software BiobrickAssist Technology

Improve

Since the idea of our project this year (BAT, BiobrickAssist Technology) mainly originated in BASE, a biobrick evaluation tool that SJTU-Software programmed in 2015, we have surveyed and tested it in detail and found several shortcomings of its design and performance. While with the main function of evaluation for biobricks working quite well, and we’d like to set up an evaluation system like BASE, we decided to improve BASE for our project. However, due to its poor scalability, we programmed our web-based application under a new framework with Node.js.

We improved BASE both on database and function.

First of all, we noticed the database we used in 2015 was out of date, and the data stored was not sufficient for our further improvement of evaluation function. Therefore it may contain wrong information for biobricks. Fortunately we had a chance to discuss with USTC-Software about how to filter bad or even wrong data from the very beginning, that is, we collected new data this year from the official site http://parts.igem.org/ and immediately cut off bad data roughly following the advice of our PI and USTC-Software. Besides, some columns in MySQL database may not be so frequently used and influence little on scoring process (with a less weight), so we deleted them and put more weight on other factors such as submission time. Driven by Node.js’s MySQL pool, the database was accessed more easily and quickly.

At least so far our algorithm running on machine is hard to defeat human’s insight and knowledge, therefore we developed BAT Q/A Community. It’s not only a scalable plugin tied to the main evaluation and search function, but also a indispensable part of BAT, in which users can put forward and answer questions about biobricks, synthetic biology and even the work in the lab. This idea came from our project iMAP in 2016. We have surveyed and noticed that the instant messaging function we developed in 2016 could hardly replace existing ones such as QQ/Wechat, LINE and WhatsApp, and additionally not everyone got used to sending instant messages for academic communication, so email, or a platform like Quora was more suitable for knowledge and information exchange. Users can also search questions by keyword or browse them by categories or tags. Maybe if the algorithm goes wrong, or performs weird compared to our knowledge on synthetic biology or even common sense, users can go to Q/A Community to seek detailed discussion about their interested biobricks and report bugs of our application. So Q/A Community can be the reinforcement of our evaluation system. We evaluate both automatically and manually.

BASE could evaluate a biobrick at part and device level. In ordered to evaluate at higher level, we also improved its core function. We collected more data about biobricks at system level, and merged them into our MySQL database. However, the warning is that the evaluating process may lack accuracy because the additional data about biobricks at system level is too little. The core scoring algorithm is similar but we re-coded it in JavaScript (Node.js) instead of Perl, which can work better if our site has larger visitor volume and combine better with the frontend code (using framework like React.js and Vue.js).

Show info
  • Address No. 800 Dongchuan Road, Minhang District, Shanghai, China
  • Contact Us dcclogin@126.com