Difference between revisions of "Team:TU Darmstadt/Demonstrate"

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We manufactured a <b>protease-sensing</b> chitosan derivative. For the verifaction of its functionality it has been measured via flourometer. It showed a peak at 390 nm before the protease was added. After the cleavage with the protease a shift of this peak to the wavelength of 450 nm was observed.<br>
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We manufactured a <b>protease-sensing</b> chitosan derivative. For the verifaction of its functionality it was measured via a fluorometer. It showed a peak at 390 nm before the protease was added. After cleavage with proteases, a shift of this peak to the wavelength of 450 nm was observed.<br>
 
<a href="https://2017.igem.org/Team:TU_Darmstadt/project/chemistry#results">See more Details</a>
 
<a href="https://2017.igem.org/Team:TU_Darmstadt/project/chemistry#results">See more Details</a>
 
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     <figcaption><b>Figure 5. We engineered a protease detecting chitosan derivative.</b> Left: Fluorometric measurement of the peptide cleavage via proteases. Right: Cuvette filled this the product under UV-light.</figcaption>
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     <figcaption><b>Figure 5. We engineered a protease detecting chitosan derivative.</b> Left: Fluorometric measurement of the peptide cleavage via proteases. Right: Cuvette filled with the product under UV-light.</figcaption>
 
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Revision as of 10:25, 31 October 2017

MainPage

Proof of Concept

Here we want to give you a short tour about what we achieved in the project. We show our results and give a view on the resulting product, an protease-sensing hydrogel.

Chitin Synthase NodC

We expressed the chitin synthase NodC in E. coli Top10 successfully. The protein was tagged with a His-tag and purified via an ÄKTA system. To verify the expression and purification a SDS-PAGE was done.
The functionality of the NodC enzyme was verified by performing the UDP-Glo™ Glycosyltransferase Assay. The evaluation of the assay shows that the NodC enzyme converts the UDP-GlcNAc to free UPD and a growing oligo-GlcNAc-chain. The free UDP is converted to ATP, which acts as a substrate for a luciferase reaction and creates luminescence. So the assay and the increasing luminescence depending on increasing enzyme concentrations shows that the NodC enzyme can create chitin oligomers.
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Figure 1. Activity assay of NodC. The NodC (40 ng) was titrated in 1X glycosyltransferase reaction buffer in the presence of 100 μM of UDP-N-acetylglcosamine and 10 mM N-acetylglucosamine (GlcNAc) as an acceptor substrate. The reaction was performed as described before and the luminescence was measured after 1 hour of incubation with a Tecan200 Infinite Pro plate reader. Each point is an average of two experiments, and the error bars represent the standard deviations. RLU = relative light units.

Chitin Deacetylase NodB

Under Construction
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Figure 2.

Hydrogel

We manufactured several hydrogels containing non-toxic and cost-effective gelling agents to form optimal wound dressings. Our hydrogels could be formed with basic laboratory equipment at any shape and could easily be adjusted to the affected tissues for optimal wound healing.
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Figure 3. We manufactured an agar-chitosan hydrogel. Using basic laboratory equipment and cheap and non-toxic reagents we produced a row of different chitosan containing hydrogels. They could be used as a basis for a medically applicable wound cover.

Chemistry

We manufactured a protease-sensing chitosan derivative. For the verifaction of its functionality it was measured via a fluorometer. It showed a peak at 390 nm before the protease was added. After cleavage with proteases, a shift of this peak to the wavelength of 450 nm was observed.
See more Details

Figure 5. We engineered a protease detecting chitosan derivative. Left: Fluorometric measurement of the peptide cleavage via proteases. Right: Cuvette filled with the product under UV-light.

ChiTUcare

To show that our project works, we manufactured a chitosan hydrogel with a fluorophore coupled to it. Upon addition of a protease solution to our ChiTUcare prototype, the hydrogel starts to glow under UV light within 7 minutes (the video speed was increased).
This proves our concept of a protease sensing hydrogel on the basis of chitosan.
As an easy and cheap to manufacture prototype, we provide an eco-friendly and adjustable system to nurture wound-healing with an antibacterial, anti-viral wound dressing, that works as a sensor for bacterial infection by emitting a blue light within minutes upon irradiation of non-hazardous UV light.

Figure 6. ChiTUcare in unactivated state.
Figure 7. ChiTUcare activated by protease.