Difference between revisions of "Team:IIT Delhi/collaborations"

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<h2 id="pfont1"><span class="image left"><img src="https://static.igem.org/mediawiki/2017/b/b4/T--IIT_Delhi--Dr.Zia_Shaikh.jpg" alt="" /></span><br> The IIT Delhi iGEM team whole-heartedly collaborated with Berlin team. Berlin team was working on the affordable, practical and effective diagnostic of the widespread third world parasitic disease -Tapeworm Infection. Since India is one of the countries where millions of people are infected by this parasite, IIT Delhi directed Berlin team to a suitable site. It was a hospital in Varanasi, Uttar Pradesh where many cases of tapeworm were reported. After the successful extraction and lysis of the Tapeworm eggs, Berlin team obtained RNA molecules of the T. Solium species of the Tapeworm. IIT Delhi further assisted them by providing our own lab as -20 and -80 degrees centigrade refrigerators and other required lab apparatus were not available in the above-mentioned hospital. Sequencing of the RNA was also done and all the samples were shipped to them.
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<h2 id="pfont1"><span class="image left"><img src="https://static.igem.org/mediawiki/2017/b/b4/T--IIT_Delhi--Dr.Zia_Shaikh.jpg" alt="" /></span><br> The IIT Delhi iGEM team whole-heartedly collaborated with Berlin team. Berlin team was working on the affordable, practical and effective diagnostic of the widespread third world parasitic disease -Tapeworm Infection. Since India is one of the countries where millions of people are infected by this parasite, IIT Delhi directed Berlin team to a suitable site. It was a hospital in Varanasi, Uttar Pradesh where many cases of tapeworm were reported. After the successful extraction and lysis of the Tapeworm eggs, Berlin team obtained RNA molecules of the T. Solium species of the Tapeworm. IIT Delhi further assisted them by providing our own lab as -20 and -80 degrees centigrade refrigerators and other required lab apparatus were not available in the above-mentioned hospital. Sequencing of the RNA was also done and all the samples were shipped to them.<br>
  
This was not only constricted to iGEM collaboration as we further plan to adopt this technology for affordable diagnostic of tapeworm infection which is otherwise done using fecal inspection using a microscope. This would help in timely detection of infection and thus would save lives of many people. Following this, Berlin team provided us the protease stains without Degradation Tags required by us to generate oscillations in the form of a square. Here is the link to the iGEM Berlin Team.
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This was not only constricted to iGEM collaboration as we further plan to adopt this technology for affordable diagnostic of tapeworm infection which is otherwise done using fecal inspection using a microscope. This would help in timely detection of infection and thus would save lives of many people. Following this, Berlin team provided us the protease stains without Degradation Tags required by us to generate oscillations in the form of a square. Here is the link to the iGEM Berlin Team.
https://2017.igem.org/Team:Berlin_diagnostX/Collaborations
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<a> https://2017.igem.org/Team:Berlin_diagnostX/Collaborations </a>
 
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<h2 id="pfont1"><span class="image left"><img src="https://static.igem.org/mediawiki/2017/b/b7/T--IIT_Delhi--Prof.Atul_Narang.jpg" alt="" /></span><b id="pfont2">Prof. Atul Narang (DBEB)</b><br> Dr. Atul Narang is the Head of Department of Department of Biochemical Engineering and Biotechnology (DBEB), IIT Delhi. He has supported us remarkably in terms of the lab space, resources and facilities.
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<h2 id="pfont1"><span class="image left"><img src="https://static.igem.org/mediawiki/2017/b/b7/T--IIT_Delhi--Prof.Atul_Narang.jpg" alt="" /></span><br> iGEM IIT Delhi assisted team Glasgow in 2016 for filling up survey forms designed for the people of India. This year iGEM Glasgow helped us by providing the biological parts ( pPhlF, RBS+PhlF + T, pSrpR, RBS + SrpR + T) which turned to be of immense use in forming the Oscillator.
 
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<h2 id="pfont1"><span class="image right"><img src="https://static.igem.org/mediawiki/2017/b/ba/T--IIT_Delhi--Prof.Shaunak_Sen.jpg" alt="" /></span><b id="pfont2">Prof.Shaunak Sen (Department of Electrical Engineering)</b><br> Prof. Shaunak Sen has assisted us profoundly with Microscopes, Plate-readers, and protocols. We would also like to thank him for his valuable advices on the idea Square Wave Generator, especially during the brainstorming sessions at the beginning.
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                                                        <h2 id="pfont1"><span class="image left"><img src="https://static.igem.org/mediawiki/2017/4/40/T--IIT_Delhi--Dr.Prof.James_Gomes.jpg" alt="" /></span><b id="pfont2">Prof. James Gomes (Kusuma School of Biological Sciences)</b><br> We would like to greatly acknowledge Prof. James Gomes for his invaluable guidance towards the idea of the project. He has also assisted us with mathematical analysis, design and construction and possible topologies of the project.
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                                                        <h2 id="pfont1"><span class="image right"><img src="https://static.igem.org/mediawiki/2017/c/c6/T--IIT_Delhi--Prof.Ravi_Elangovan.jpg" alt="" /></span><b id="pfont2">Prof. Ravi Elangovan (DBEB)</b><br> Prof. Ravi Elangovan gave us insight to High resolution Methods in Biotech, he was always available after classes to discuss and help us out with the doubts and difficulties.
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He also helped us understand the basics of fluorescence microscopy  which turned out to be useful for the project.
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                                                        <h2 id="pfont1"><span class="image left"><img src="https://static.igem.org/mediawiki/2017/d/d8/T--IIT_Delhi--Dr.Vivekanandan_Perumal.jpg" alt="" /></span><b id="pfont2">Dr.Vivekanandan Perumal ( Kusuma School of Biological Sciences)</b><br> Dr. Vivekanandan is an assistant professor at KSBS, IIT Delhi. He helped us in developing our cloning strategy and provided us with various lab equipments at crucial times.
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                                                        <h2 id="pfont1"><span class="image right"><img src="https://static.igem.org/mediawiki/2017/e/e6/T--IIT_Delhi--Dr.Ashish_Misra.jpg" alt="" /></span><b id="pfont2">Dr.Ashish Misra (DBEB)</b><br> Dr. Ashish Misra is an assistant professor at DBEB, IIT Delhi and is a Professor mentor at iGEM IIT Delhi. He joined the team in 2016 and has helped us in troubleshooting our project and gaining more insight into it. He has also been pivotal in team administration and provision of facilities.
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                                                        <h2 id="pfont1"><span class="image left"><img src="https://static.igem.org/mediawiki/2017/0/0f/T--IIT_Delhi--Prof.Sumeet_Agrawal.jpg" alt="" /></span><b id="pfont2">Sumeet Agarwal (Department of Electrical Engineering)</b><br>
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<button class="accordion back3" style="font-weight: bold;">Mentoring IISER Mohali iGEM team (2016-2017)</button>
 
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<h2 id="pfont1"><span class="image left"><img src="https://static.igem.org/mediawiki/2017/7/71/T--IIT_Delhi--Anamika_Chauhan.jpg" alt="" /></span><b id="pfont2">Ms.Anamika Chauhan</b><br> Ms. Anamika is a PhD student at DBEB, IIT Delhi and has been a part of team iGEM IIT Delhi since 2015. She was crucial to our Wet Lab experiments and troubleshooting and helped us improve our lab procedures. Moreover, she has been very supportive at crucial moments faced during the project.
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<h2 id="pfont1"><span class="image left"><img src="https://static.igem.org/mediawiki/2017/7/71/T--IIT_Delhi--Anamika_Chauhan.jpg" alt="" /></span>A PhD student, Mr. Mahendra Sahare, doing a humanities project under a Supreme Court lawyer, Dr. Naveen Thayyil, has been in collaboration with iGEM IIT Delhi for the past two years. Together, we have worked on the aspect of ‘Ethical Scientific Practices’. Also, on his recent visit to IISER Mohali, he came back with a collaborative offer for iGEM IIT Delhi to mentor IISER Mohali and help in the establishment of iGEM club there. On our return from the Giant Jamboree 2016, our team members gave a presentation scheduled there, and thereafter our  
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team mentored the iGEM Mohali team.
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Here is the link for Mohali iGEM Team: <a> https://2017.igem.org/Team:Berlin_diagnostX/Collaborations </a>
 
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<h2 id="pfont1"><span class="image right"><img src="https://static.igem.org/mediawiki/2017/f/f8/T--IIT_Delhi--Saurabh_Parikh.jpg" alt="" /></span><b id="pfont2">Mr. Saurabh Parikh</b><br> Saurabh Parikh is a fourth year B-tech student from DBEB. He helped us right from introducing to the field of Microfluidics to designing, constructing, using microfluidic chambers. We really appreciate his remarkable support for the project.
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                                                        <h2 id="pfont1"><span class="image left"><img src="https://static.igem.org/mediawiki/2017/9/95/T--IIT_Delhi--Omkar_Vinchure.jpg" alt="" /></span><b id="pfont2">Mr.Omkar Vinchure</b><br> Mr. Omkar is a PhD student at DBEB, IIT Delhi and has been a mentor for iGEM IIT Delhi since 2015. He assisted us in performing advanced lab procedures and guided us throughout the whole project. He also played a crucial role in the team selection. Moreover, he allowed us access to his lab facilities, especially, the Nikon Eclipse Ti-S Fluorescence Microscope.
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                                                        <h2 id="pfont1"><span class="image right"><img src="https://static.igem.org/mediawiki/2017/f/fd/T--IIT_Delhi--Arun_Thappa.jpg" alt="" /></span><b id="pfont2">Mr. Arun Thapa</b><br> Mr. Arun is a Phd student at DBEB, IIT Delhi and has been a mentor for iGEM IIT Delhi since 2016. He played a significant role in Wet lab experiments and troubleshooting and gave us crucial advices at critical times.
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<button class="accordion back4" style="font-weight: bold;">Assistance from various Labs:</button>
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<button class="accordion back4" style="font-weight: bold;">Team: MANCHESTER </button>
 
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<h2 id="pfont1"><span class="image left"><img src="https://static.igem.org/mediawiki/2017/c/c9/T--IIT_Delhi--background.png" alt="" /></span><b id="pfont2">UG Lab</b><br> Mr.Gulshan is the Lab Assistant of the Undergrad Lab, he has played a crucial role in terms of providing lab facilities and access throughout the entire tenure of the project.
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<h2 id="pfont1"><span class="image left"><img src="https://static.igem.org/mediawiki/2017/c/c9/T--IIT_Delhi--background.png" alt="" /></span>As participants in the iGEM Competition, we have come to accept the ability to modify genes as an obvious fact, one that does not require much reflection on our end. At the same time, whilst we understand such possibility is granted to us by law, not many realise the extent to which law may incentivise, guide, shape and, at times, limit our efforts. It originates from politics, creates institutional procedures, gives life to new businesses, dictates the pace of scientific progress, and affects consumer choices. In this, law reflects the perceptions of its creators while its creators reflect diversity of the country’s citizens. In this, law is diverse.
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<h2 id="pfont1"><span class="image right"><img src="https://static.igem.org/mediawiki/2017/c/c9/T--IIT_Delhi--background.png" alt="" /></span><b id="pfont2">Mr. K Vinay (RNA-2 lab)</b><br> Being a former iGEM member of 2015 and 2016 iGEM IIT Delhi team, he was exploring Pastures anew, despite nearing the end of his academic tenure at the institute, he was always available for brainstorming and troubleshooting sessions. We would like to thank him for his valuable advice and support.
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                                                        <h2 id="pfont1"><span class="image left"><img src="https://static.igem.org/mediawiki/2017/c/c9/T--IIT_Delhi--background.png" alt="" /></span><b id="pfont2">DyCoBS</b><br> Mr. Venkat and Mr. Abhishek have assisted us in this lab.
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In this collaboration, we aimed at creating a document that would illustrate that very depth and diversity of law. For this reason, the first issue we discussed is law-related politics, the second its bureaucracy, third law’s impact on business, fourth on science and finally on consumer behaviour. Willing to gain an even deeper understanding of GMM legislations, we have invited teams 15 from different countries to participate in these collaborative efforts. In the end, the final document has been created by 137 iGEMers from 10 teams, 10 countries, 7 different iGEM tracks and 5 continents. Have a look at the fruits of the 3 months-long interactions, discussions and meet-ups.
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We thank iGEM Manchester team to initiate this collaboration and are pleased to participate.
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Visit wiki ( <a> https://2017.igem.org/Team:Manchester </a>)
  
                                                        <h2 id="pfont1"><span class="image right"><img src="https://static.igem.org/mediawiki/2017/c/c9/T--IIT_Delhi--background.png" alt="" /></span><b id="pfont2">Molecular Motors Lab</b><br> Mr. Sourabh Parikh helped us when we needed access to molecular motors lab.
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For summary and further details
 
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Revision as of 17:39, 30 October 2017

iGEM IIT Delhi

COLLABORATIONS

                                                                                                                                                                                                                 

The credits for accomplishment of this project goes to the dedication, commitment and enthusiasm shown by a large number of people and parties from multiple disciplines. It gives us immense pleasure and gratification to acknowledge their support and assistance towards the execution of the project.


The IIT Delhi iGEM team whole-heartedly collaborated with Berlin team. Berlin team was working on the affordable, practical and effective diagnostic of the widespread third world parasitic disease -Tapeworm Infection. Since India is one of the countries where millions of people are infected by this parasite, IIT Delhi directed Berlin team to a suitable site. It was a hospital in Varanasi, Uttar Pradesh where many cases of tapeworm were reported. After the successful extraction and lysis of the Tapeworm eggs, Berlin team obtained RNA molecules of the T. Solium species of the Tapeworm. IIT Delhi further assisted them by providing our own lab as -20 and -80 degrees centigrade refrigerators and other required lab apparatus were not available in the above-mentioned hospital. Sequencing of the RNA was also done and all the samples were shipped to them.
This was not only constricted to iGEM collaboration as we further plan to adopt this technology for affordable diagnostic of tapeworm infection which is otherwise done using fecal inspection using a microscope. This would help in timely detection of infection and thus would save lives of many people. Following this, Berlin team provided us the protease stains without Degradation Tags required by us to generate oscillations in the form of a square. Here is the link to the iGEM Berlin Team. https://2017.igem.org/Team:Berlin_diagnostX/Collaborations



iGEM IIT Delhi assisted team Glasgow in 2016 for filling up survey forms designed for the people of India. This year iGEM Glasgow helped us by providing the biological parts ( pPhlF, RBS+PhlF + T, pSrpR, RBS + SrpR + T) which turned to be of immense use in forming the Oscillator.


A PhD student, Mr. Mahendra Sahare, doing a humanities project under a Supreme Court lawyer, Dr. Naveen Thayyil, has been in collaboration with iGEM IIT Delhi for the past two years. Together, we have worked on the aspect of ‘Ethical Scientific Practices’. Also, on his recent visit to IISER Mohali, he came back with a collaborative offer for iGEM IIT Delhi to mentor IISER Mohali and help in the establishment of iGEM club there. On our return from the Giant Jamboree 2016, our team members gave a presentation scheduled there, and thereafter our team mentored the iGEM Mohali team. Here is the link for Mohali iGEM Team: https://2017.igem.org/Team:Berlin_diagnostX/Collaborations


As participants in the iGEM Competition, we have come to accept the ability to modify genes as an obvious fact, one that does not require much reflection on our end. At the same time, whilst we understand such possibility is granted to us by law, not many realise the extent to which law may incentivise, guide, shape and, at times, limit our efforts. It originates from politics, creates institutional procedures, gives life to new businesses, dictates the pace of scientific progress, and affects consumer choices. In this, law reflects the perceptions of its creators while its creators reflect diversity of the country’s citizens. In this, law is diverse. In this collaboration, we aimed at creating a document that would illustrate that very depth and diversity of law. For this reason, the first issue we discussed is law-related politics, the second its bureaucracy, third law’s impact on business, fourth on science and finally on consumer behaviour. Willing to gain an even deeper understanding of GMM legislations, we have invited teams 15 from different countries to participate in these collaborative efforts. In the end, the final document has been created by 137 iGEMers from 10 teams, 10 countries, 7 different iGEM tracks and 5 continents. Have a look at the fruits of the 3 months-long interactions, discussions and meet-ups. We thank iGEM Manchester team to initiate this collaboration and are pleased to participate. Visit wiki ( https://2017.igem.org/Team:Manchester ) For summary and further details


Mr.Balbir Singh
Mr. Balbir is the lab-in-charge at Laser and 3-D Printing Lab at IIT Delhi. He provided us with access to his lab and was pivotal to the laser-etching which was used in the Microfluidic Chamber. Epilog LASER FUSION M2™, used for laser etching, was managed by him as well.



We would like to express our special gratitude towards iGEM Glasgow team for providing the biological parts ( pPhlF, RBS+PhlF + T, pSrpR, RBS + SrpR + T).


Mr. Lavlesh Bhanot
Mr. Lavlesh Bhanot is the Course Manager of Professional Ethics and Social Responsibility (PESR) committee IIT Delhi. He helped us in conducting the workshop under the course of Ethics and Social Responsibility. We thank him for his interest and assistance.

Mrs. Charu Maini
Mrs. Charu Maini is the Principal of DAV Public School, Sector 48,49, she played a significant role in spreading our message to other schools in Delhi. We thank her for the assistance.

Mr. Tarun Gulyami
Mr. Tarun Gulyami is the Head of Biology Department, DAV Public School, Sector 14, he showed his keen interest towards the workshop conducted and was interested to send India’s first High School team at iGEM. We appreciate his support and enthusiasm.


We would also like to thank Prof. Sangeeta Kohli (Department of Mechanical Engineering) And Prof. P. V. Madhusudhan Rao (Mechanical Engineering Department) for their support to conduct human practices at Institute level.



Mr. Sunil, General Accountant, Prompt Enterprises has given tremendous amount of his time towards the formalities and documentation of the funding from Prompt Enterprises.


Prompt enterprises Pvt Ltd.
Without the support of our title sponsor ‘Prompt enterprises pvt ltd’ it wouldn’t have been possible to carry out our financial requirement whether it is for the lab resources or fees or travelling expenses.

Snapgene
We would also like to express our gratitude towards Snapgene for providing us access to the software. It turned out to be of immense use for designing the biological parts.


We thank our previous sponsors for their valuable support: Mahindra, Coding Blocks, DHL, Medanta, Woodland, Department of Biotechnology (DBT), Govt. of India.


Wetlab
Kshitij Rai, Saksham Sharma, Abhilash Patel, Pulkit Srivastava, Sashi Kalan, Pratyush Maini, Divya Choudhary, Siddhesh Gandhi.

Computational Modelling
Abhilash Patel, Tarun Mahajan, Kshitij Rai, Pulkit Srivastava, Shreya Johri.

Human Practices
Milind Zode, Tanuj Garg, Kshitij Rai, Pulkit Srivastava, Ishank Pahwa, Nipun Gupta.

Wiki Development
Pratyush Maini, Divya Choudhary.

Creative, Design and Content Development
Divya Choudhary, Pratyush Maini, Kshitij Rai, Varuni Sarwal, Preeti Raj, Abhishek Kumar, Shreya Johri, Tanuj Garg, Milind Zode.

Marketing
Tanuj Garg, Nipun Gupta, Ishank Pahwa, Pratyush Maini, Divya Choudhary, Pulkit Srivastava, Sashi Kalan, Milind Zode.


We would like to thank our institute


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Sponsored By
Contact Us Address

E-mail: iitd.igem@gmail.com
Undergraduate Laboratory
Department of Biotechnology and Biochemical Engineering, IIT Delhi