Ianliu1997 (Talk | contribs) |
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} | } | ||
− | |||
.model_wrapper { | .model_wrapper { | ||
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} | } | ||
− | + | function toggleHeight13(e, maxHeight) { | |
+ | e = document.getElementById("s13"); // e = the gray div | ||
+ | |||
+ | if(e.style.height != '30px') { | ||
+ | e.style.height = '30px'; // height of one line: 20px | ||
+ | } else { | ||
+ | e.style.height = maxHeight + 'px'; | ||
+ | } | ||
+ | } | ||
</script> | </script> | ||
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<th>Symbol</th> | <th>Symbol</th> | ||
<th scope="col">Definition</th> | <th scope="col">Definition</th> | ||
− | |||
− | |||
<th scope="col"&; style="border-left:3px solid;">Symbol</th> | <th scope="col"&; style="border-left:3px solid;">Symbol</th> | ||
<th scope="col"&>Definition</th> | <th scope="col"&>Definition</th> | ||
− | |||
− | |||
</tr> | </tr> | ||
<tr> | <tr> | ||
<th>N</th> | <th>N</th> | ||
<th width=200>nitrogen</th> | <th width=200>nitrogen</th> | ||
− | |||
− | |||
<th style="border-left:3px solid;">X</th> | <th style="border-left:3px solid;">X</th> | ||
<th width=200>biomass</th> | <th width=200>biomass</th> | ||
− | |||
− | |||
<tr> | <tr> | ||
<th>α</th> | <th>α</th> | ||
<th width=200>the instantaneous yield coefficient of product formation due to cell growth</th> | <th width=200>the instantaneous yield coefficient of product formation due to cell growth</th> | ||
− | |||
− | |||
<th style="border-left:3px solid;">β</th> | <th style="border-left:3px solid;">β</th> | ||
<th width=200>the specific formation rate of product</th> | <th width=200>the specific formation rate of product</th> | ||
− | |||
− | |||
</tr> | </tr> | ||
<tr> | <tr> | ||
<th>q</th> | <th>q</th> | ||
<th width=200>Minimum N quota</th> | <th width=200>Minimum N quota</th> | ||
− | |||
− | |||
<th style="border-left:3px solid;">q<sub>M</sub></th> | <th style="border-left:3px solid;">q<sub>M</sub></th> | ||
<th width=200>Maximum N quota</th> | <th width=200>Maximum N quota</th> | ||
− | |||
− | |||
</tr> | </tr> | ||
<tr> | <tr> | ||
<th>Q</th> | <th>Q</th> | ||
<th width=200> N quota</th> | <th width=200> N quota</th> | ||
− | |||
− | |||
<th style="border-left:3px solid;">P</th> | <th style="border-left:3px solid;">P</th> | ||
<th width=200>lipid</th> | <th width=200>lipid</th> | ||
− | |||
− | |||
</tr> | </tr> | ||
<tr> | <tr> | ||
<th>V<sub>h</sub></th> | <th>V<sub>h</sub></th> | ||
<th width=200>Half-saturation coefficient</th> | <th width=200>Half-saturation coefficient</th> | ||
− | |||
− | |||
<th style="border-left:3px solid;">V<sub>m</sub></th> | <th style="border-left:3px solid;">V<sub>m</sub></th> | ||
<th width=200>Maximum uptake rate of nitrogen</th> | <th width=200>Maximum uptake rate of nitrogen</th> | ||
− | |||
− | |||
</tr> | </tr> | ||
</table> | </table> | ||
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<th>Symbol</th> | <th>Symbol</th> | ||
<th scope="col">Definition</th> | <th scope="col">Definition</th> | ||
− | |||
<th scope="col"&; style="border-left:3px solid;">Symbol</th> | <th scope="col"&; style="border-left:3px solid;">Symbol</th> | ||
<th scope="col"&>Definition</th> | <th scope="col"&>Definition</th> | ||
− | |||
</tr> | </tr> | ||
<tr> | <tr> | ||
<th>n<sub>1</sub></th> | <th>n<sub>1</sub></th> | ||
<th width=200>biomass at frist state</th> | <th width=200>biomass at frist state</th> | ||
− | + | <th style="border-left:3px solid;">n<sub>2</sub>:</th> | |
− | <th style="border-left:3px solid;">n<sub>2</sub></th> | + | |
<th width=200>biomass at secind state</th> | <th width=200>biomass at secind state</th> | ||
− | |||
<tr> | <tr> | ||
<th>x</th> | <th>x</th> | ||
− | <th width=200>biomass concentration | + | <th width=200>biomass concentration(g/l)</th> |
− | + | ||
<th style="border-left:3px solid;">t</th> | <th style="border-left:3px solid;">t</th> | ||
− | <th width=200>time | + | <th width=200>time(hr)</th> |
− | + | ||
</tr> | </tr> | ||
</table> | </table> | ||
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<tr> | <tr> | ||
<th>n<sub>s</sub></th> | <th>n<sub>s</sub></th> | ||
− | <th>initial nitrogen concentration | + | <th>initial nitrogen concentration</th> |
<th>-</th> | <th>-</th> | ||
</tr> | </tr> | ||
Line 1,304: | Line 1,281: | ||
<center> | <center> | ||
<a href="#!" onclick="toggleHeight7(this, 1000);" style='font-size:20px;color:#2c498c'> | <a href="#!" onclick="toggleHeight7(this, 1000);" style='font-size:20px;color:#2c498c'> | ||
+ | click to close | ||
+ | </a> | ||
+ | </center> | ||
+ | |||
+ | <!-- Out --> | ||
+ | <div class='panel'> | ||
+ | <div id="s13" class="expandable" style='height: 30px;padding-top:15px;'> | ||
+ | |||
+ | <a href="#!" onclick="toggleHeight13(this, 1000); return false" | ||
+ | style="font-family:'Acme', sans-serif;font-size:34px;color:#393a1f;height: 30px;"> | ||
+ | NrtA exocrine secretion | ||
+ | </a> | ||
+ | |||
+ | |||
+ | <h6 style='color:#bc0101; font-family:"Roboto Mono", monospace;'> | ||
+ | dr<sub>1</sub>/dt=[1/(1+p<sub>1</sub>/a<sub>1</sub>)]c1p1-[1/(1+p<sub>2</sub>/b<sub>1</sub>)]v<sub>1</sub>r<sub>1</sub> | ||
+ | <br> | ||
+ | <br>dr<sub>2</sub>/dt=[1/(1+p<sub>2</sub>/a<sub>2</sub>)]c<sub>2</sub>p<sub>1</sub>-[1/(1+p<sub>2</sub>/b<sub>2</sub>)]v<sub>2</sub>r<sub>2</sub> | ||
+ | <br> | ||
+ | <br>dr<sub>3</sub>/dt=[1/(1+p<sub>3</sub>/a<sub>3</sub>)]c<sub>3</sub>p<sub>1</sub>-[1/(1+p<sub>2</sub>/b<sub>3</sub>)]v<sub>3</sub>r<sub>3</sub> | ||
+ | <br> | ||
+ | <br>dp<sub>1</sub>/dt=[1/(1+p<sub>1</sub>/d<sub>1</sub>)]l<sub>1</sub>r<sub>1</sub>-u<sub>1</sub>p<sub>1</sub> | ||
+ | <br> | ||
+ | <br>dp<sub>2</sub>/dt=[1/(1+p<sub>2</sub>/d<sub>2</sub>)]l<sub>2</sub>r<sub>2</sub>-u<sub>2</sub>p<sub>2</sub> | ||
+ | <br> | ||
+ | <br>dp<sub>3</sub>/dt=[1/(1+p<sub>3</sub>/d<sub>3</sub>)]l<sub>3</sub>r<sub>3</sub>-u<sub>3</sub>p<sub>3</sub> | ||
+ | </h6> | ||
+ | |||
+ | <table> | ||
+ | <tr> | ||
+ | <th>Symbol</th> | ||
+ | <th scope="col">Definition</th> | ||
+ | <th scope="col"&>Unit</th> | ||
+ | <th scope="col"&>Value</th> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <th></th> | ||
+ | <th></th> | ||
+ | <th>-</th> | ||
+ | <th>-</th> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <th></th> | ||
+ | <th></th> | ||
+ | <th></th> | ||
+ | <th></th> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <th></th> | ||
+ | <th></th> | ||
+ | <th>-</th> | ||
+ | <th></th> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <th></th> | ||
+ | <th></th> | ||
+ | <th>-</th> | ||
+ | <th>-</th> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <th></th> | ||
+ | <th></th> | ||
+ | <th>-</th> | ||
+ | <th></th> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <th></th> | ||
+ | <th></th> | ||
+ | <th>-</th> | ||
+ | <th></th> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <th></th> | ||
+ | <th></th> | ||
+ | <th></th> | ||
+ | <th></th> | ||
+ | </tr> | ||
+ | |||
+ | </table> | ||
+ | |||
+ | <p></p> | ||
+ | <center> | ||
+ | <img src='https://static.igem.org/mediawiki/2017/f/fe/T--NYMU-Taipei--model_out.gif' | ||
+ | alt='NrtA exocrine secretion' | ||
+ | style='width:65%'> | ||
+ | <p style='font-size:20px'>fig.13 NrtA exocrine secretion</p> | ||
+ | </center> | ||
+ | <p></p> | ||
+ | |||
+ | <center> | ||
+ | <a href="#!" onclick="toggleHeight13(this, 1000);" style='font-size:20px;color:#2c498c'> | ||
click to close | click to close | ||
</a> | </a> |
Revision as of 13:55, 25 October 2017
Modeling is an extremely important part to our project, because it helps us accurately check and predict the results of the experiments, which are worked in the wet lab. In our project, there are two essential types of microalgae that play very important roles, Synechococcus PCC7942 and Chlorella vulgaris. The following will show our success in modeling.
Synechococcus PCC7942
The modeling from figure 1 to figure 5 belongs to the experiments of Synechococcus PCC7942 pigments.
Chlorella vulgaris
The modeling from figure 6 to figure 12 belongs to the experiments of Chlorella vulgaris nitrogen starvation.