Difference between revisions of "Team:ITB Indonesia/Part Collection"

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{{ITB_Indonesia}}
 
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<h3>★  ALERT! </h3>
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<p>This page is used by the judges to evaluate your team for the <a href="https://2017.igem.org/Judging/Medals">medal criterion</a> or <a href="https://2017.igem.org/Judging/Awards"> award listed above</a>. </p>
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<p> Delete this box in order to be evaluated for this medal criterion and/or award. See more information at <a href="https://2017.igem.org/Judging/Pages_for_Awards"> Instructions for Pages for awards</a>.</p>
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<div class="column full_size" style="background: #1c2922; margin-top: -40px; padding: 30px; color: #e8e6d1">
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<h1 class="ITB_h1">Parts</h1>
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<p style="font-style: italic;"><strong>Parts Collection</strong></p>
  
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<h1> Part Collection </h1>
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<p>Did your team make a lot of great parts? Is there a theme that ties all your parts together? Do you have more than 10 parts in this collection? Did you make a CRISPR collection, a MoClo collection, or a collection of awesome pigment parts? Describe your parts collection on this page, so the judges can evaluate you for the Best Part Collection award.</p>
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While you should put all the characterization information for your parts on the Registry, you are encouraged to explain how all your parts form a collection on this page.
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<h3>Best Part Collection Special Prize</h3>
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<p>Did your team make a lot of great parts? Is there a team that ties all your parts together? Do you have more than 10 parts in this collection? Did you make a CRISPR collection, a MoClo collection or a collection of awesome pigment parts? Tell the judges you should be evaluated for the Best Parts Collection award! To be eligible for this award, these parts must adhere to <a href="http://parts.igem.org/DNA_Submission">Registry sample submission guidelines</a> and have been sent to the Registry of Standard Biological Parts.
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<br><br>
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If you have a collection of parts you wish to nominate your team for this <a href="https://2017.igem.org/Judging/Awards">special prize</a>, make sure you add your part numbers to your <a href="https://2017.igem.org/Judging/Judging_Form">judging form</a> and delete the box at the top of this page.</p>
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<h1 class="ITB_h1" style="padding-bottom: 30px; margin-bottom: 50px; border-bottom: 2px solid #1c2922 !important; padding-left: 30px; text-align: center; color: #1c2922">Parts Collection</h1>
  
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<h4>Note</h4>
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<p>This page should list all the parts in the collection your team made during your project. You must add all characterization information for your parts on the Registry. You should not put characterization information on this page.</p>
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<h2>This is the parts collection designed by ITB Indonesia iGEM Team 2017.</h2>
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<p>:</p>
  
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<table>
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  <tr>
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    <th>Part Name</th>
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    <th>BioBrick</th>
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    <th>Description</th>
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    <th>Part Type</th>
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  </tr>
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  <tr>
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    <td>PETase</td>
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    <td><a href="http://parts.igem.org/Part:BBa_K2378001">BBa_K2378001</a></td>
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    <td>This is optimized coding sequence of PETase enzyme for <i>E. coli</i> BL21.
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</td>
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<td>Coding</td
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  </tr>
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  <tr>
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    <td>
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IrrE Coding Sequence
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</td>
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    <td><a href="http://parts.igem.org/Part:BBa_K2378007">BBa_K2378007</a></td>
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    <td>This is improved coding sequence of IrrE from BBa_K729001 (http://parts.igem.org/Part:BBa_K729001). When transformed to E. coli, this protein protected from salt, oxidative, and thermal shock.
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</td>
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<td>Coding</td
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  </tr>
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  <tr>
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    <td>EndA Endonuclease Coding Sequence from Vibrio cholera
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</td>
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    <td><a href="http://parts.igem.org/Part:BBa_K2378008">BBa_K2378008</a></td>
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    <td>This endonuclease degrades free extracellular DNA. The gene is isolated from Vibrio cholera.
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</td>
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<td>Coding</td
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  </tr>
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<tr>
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    <td>pSal + PETase Coding Device
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</td>
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    <td><a href="http://parts.igem.org/Part:BBa_K2378004">BBa_K2378004</a></td>
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    <td>ITB_Indonesia iGEM team 2017 designed a PETase enzyme coding device consisting of NahR-pSal regulatory part (BBa_J61051, http://parts.igem.org/Part:BBa_J61051) which is activated by salicylate inducer. In effect, PETase is only expressed when this device detect the presence of salicylate, which binds to NahR.
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</td>
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<td>Composite</td
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  </tr>
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  <tr>
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    <td>
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Constitutive PETase Coding Device
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</td>
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    <td><a href="http://parts.igem.org/Part:BBa_K2378005">BBa_K2378005</a></td>
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    <td>This is optimized coding sequence of PETase enzyme for E. coli BL21 with the addition of constitutive promoter BBa_J23106.
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</td>
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<td>Composite</td
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  </tr>
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  <tr>
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    <td>NhaR-PETase Constitutive Coding Device
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</td>
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    <td><a href="http://parts.igem.org/Part:BBa_K2378006">BBa_K2378006</a></td>
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    <td>This is an optimized coding sequence of PETase enzyme for E. coli BL21 with the addition of NhaR BBa_K1357002 (http://parts.igem.org/wiki/index.php?title=Part:BBa_K1357002) coding sequence. NhaR enhances the transcription of pgaABCD operon which in turn induces the production of biofilm. This part also uses constitutive promoters BBa_J23106.
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</td>
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<td>Composite</td
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  </tr>
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    <tr>
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    <td>EndA Endonuclease Coding Device from Vibrio cholera
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</td>
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    <td><a href="http://parts.igem.org/Part:BBa_K2378009">BBa_K2378009</a></td>
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    <td>This is coding device of endonuclease degrades free extracellular DNA, with constitutive promoter BBa_J61051. The gene is isolated from Vibrio cholera.
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</td>
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<td>Composite</td
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  </tr>
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</table>
  
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</body>
 
</html>
 
</html>

Latest revision as of 19:42, 1 November 2017

Team Attributions
Collaborations Overview Design Notebook Contribution Results Improve
Basic Parts Composite Part Part Collection
Silver HP Integrated and Gold Public Engagement


Parts

Parts Collection


Parts Collection

This is the parts collection designed by ITB Indonesia iGEM Team 2017.

:

Part Name BioBrick Description Part Type
PETase BBa_K2378001 This is optimized coding sequence of PETase enzyme for E. coli BL21. Coding
IrrE Coding Sequence BBa_K2378007 This is improved coding sequence of IrrE from BBa_K729001 (http://parts.igem.org/Part:BBa_K729001). When transformed to E. coli, this protein protected from salt, oxidative, and thermal shock. Coding
EndA Endonuclease Coding Sequence from Vibrio cholera BBa_K2378008 This endonuclease degrades free extracellular DNA. The gene is isolated from Vibrio cholera. Coding
pSal + PETase Coding Device BBa_K2378004 ITB_Indonesia iGEM team 2017 designed a PETase enzyme coding device consisting of NahR-pSal regulatory part (BBa_J61051, http://parts.igem.org/Part:BBa_J61051) which is activated by salicylate inducer. In effect, PETase is only expressed when this device detect the presence of salicylate, which binds to NahR. Composite
Constitutive PETase Coding Device BBa_K2378005 This is optimized coding sequence of PETase enzyme for E. coli BL21 with the addition of constitutive promoter BBa_J23106. Composite
NhaR-PETase Constitutive Coding Device BBa_K2378006 This is an optimized coding sequence of PETase enzyme for E. coli BL21 with the addition of NhaR BBa_K1357002 (http://parts.igem.org/wiki/index.php?title=Part:BBa_K1357002) coding sequence. NhaR enhances the transcription of pgaABCD operon which in turn induces the production of biofilm. This part also uses constitutive promoters BBa_J23106. Composite
EndA Endonuclease Coding Device from Vibrio cholera BBa_K2378009 This is coding device of endonuclease degrades free extracellular DNA, with constitutive promoter BBa_J61051. The gene is isolated from Vibrio cholera. Composite