Line 716: | Line 716: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt"> | mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt"> | ||
− | <p class="MsoListParagraphCxSpFirst" style="text-indent:- | + | <p class="MsoListParagraphCxSpFirst" style="text-indent:-00.0pt;mso-list:l8 level1 lfo3"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Linker motif used | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Linker motif used | ||
to provide spacer region<o:p></o:p></span></p> | to provide spacer region<o:p></o:p></span></p> | ||
− | <p class="MsoListParagraphCxSpMiddle" style="text-indent:- | + | <p class="MsoListParagraphCxSpMiddle" style="text-indent:-00.0pt;mso-list:l8 level1 lfo3"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Used to expose | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Used to expose | ||
affinity purification tags such as 6x His tag<o:p></o:p></span></p> | affinity purification tags such as 6x His tag<o:p></o:p></span></p> | ||
− | <p class="MsoListParagraphCxSpLast" style="text-indent:- | + | <p class="MsoListParagraphCxSpLast" style="text-indent:-00.0pt;mso-list:l8 level1 lfo3"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Serine and glycine | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Serine and glycine | ||
used as they are small and flexible<o:p></o:p></span></p> | used as they are small and flexible<o:p></o:p></span></p> | ||
Line 758: | Line 758: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt"> | mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt"> | ||
− | <p class="MsoListParagraphCxSpFirst" style="text-indent:- | + | <p class="MsoListParagraphCxSpFirst" style="text-indent:-00.0pt;mso-list:l1 level1 lfo4"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Coding sequence for | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Coding sequence for | ||
human proinsulin, sourced from NCIB<o:p></o:p></span></p> | human proinsulin, sourced from NCIB<o:p></o:p></span></p> | ||
− | <p class="MsoListParagraphCxSpMiddle" style="text-indent:- | + | <p class="MsoListParagraphCxSpMiddle" style="text-indent:-00.0pt;mso-list:l1 level1 lfo4"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Consists of A, B | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Consists of A, B | ||
and C chains, but C-peptide is cleaved out<o:p></o:p></span></p> | and C chains, but C-peptide is cleaved out<o:p></o:p></span></p> | ||
− | <p class="MsoListParagraphCxSpMiddle" style="text-indent:- | + | <p class="MsoListParagraphCxSpMiddle" style="text-indent:-00.0pt;mso-list:l1 level1 lfo4"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Contains 3 <span class="SpellE">disulphide</span> bonds<o:p></o:p></span></p> | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Contains 3 <span class="SpellE">disulphide</span> bonds<o:p></o:p></span></p> | ||
− | <p class="MsoListParagraphCxSpLast" style="text-indent:- | + | <p class="MsoListParagraphCxSpLast" style="text-indent:-00.0pt;mso-list:l1 level1 lfo4"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Contains arginine | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Contains arginine | ||
residues adjacent to C-peptide to allow cleavage<o:p></o:p></span></p> | residues adjacent to C-peptide to allow cleavage<o:p></o:p></span></p> | ||
Line 775: | Line 775: | ||
border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
padding:0cm 5.4pt 0cm 5.4pt"> | padding:0cm 5.4pt 0cm 5.4pt"> | ||
− | |||
− | |||
<p class="MsoNormal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></p> | <p class="MsoNormal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></p> | ||
<p class="MsoNormal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></p> | <p class="MsoNormal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></p> | ||
Line 807: | Line 805: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt"> | mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt"> | ||
− | <p class="MsoListParagraphCxSpFirst" style="text-indent:- | + | <p class="MsoListParagraphCxSpFirst" style="text-indent:-00.0pt;mso-list:l5 level1 lfo5"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Consists of short | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Consists of short | ||
linker peptide instead of C-peptide<o:p></o:p></span></p> | linker peptide instead of C-peptide<o:p></o:p></span></p> | ||
− | <p class="MsoListParagraphCxSpMiddle" style="text-indent:- | + | <p class="MsoListParagraphCxSpMiddle" style="text-indent:-00.0pt;mso-list:l5 level1 lfo5"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Does not require | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Does not require | ||
cleavage therefore simplifies production procedures<o:p></o:p></span></p> | cleavage therefore simplifies production procedures<o:p></o:p></span></p> | ||
− | <p class="MsoListParagraphCxSpMiddle" style="text-indent:- | + | <p class="MsoListParagraphCxSpMiddle" style="text-indent:-00.0pt;mso-list:l5 level1 lfo5"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Linker peptide | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Linker peptide | ||
raises <span class="SpellE">pI</span> of insulin analogue (long lasting after | raises <span class="SpellE">pI</span> of insulin analogue (long lasting after | ||
administration)<o:p></o:p></span></p> | administration)<o:p></o:p></span></p> | ||
− | <p class="MsoListParagraphCxSpLast" style="text-indent:- | + | <p class="MsoListParagraphCxSpLast" style="text-indent:-00.0pt;mso-list:l5 level1 lfo5"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Increased <span class="SpellE">thermostability</span> (based on other single chain insulin | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Increased <span class="SpellE">thermostability</span> (based on other single chain insulin | ||
analogues tested)<o:p></o:p></span></p> | analogues tested)<o:p></o:p></span></p> | ||
Line 826: | Line 824: | ||
border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | border-top:none;mso-border-top-alt:solid windowtext .5pt;mso-border-alt:solid windowtext .5pt; | ||
padding:0cm 5.4pt 0cm 5.4pt"> | padding:0cm 5.4pt 0cm 5.4pt"> | ||
− | |||
<p class="MsoNormal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></p> | <p class="MsoNormal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></p> | ||
<p class="MsoNormal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></p> | <p class="MsoNormal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></p> | ||
Line 854: | Line 851: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt"> | mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt"> | ||
− | <p class="MsoListParagraphCxSpFirst" style="text-indent:- | + | <p class="MsoListParagraphCxSpFirst" style="text-indent:-00.0pt;mso-list:l6 level1 lfo6"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Codon optimized for | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Codon optimized for | ||
use in <i style="mso-bidi-font-style:normal">E. coli</i><o:p></o:p></span></p> | use in <i style="mso-bidi-font-style:normal">E. coli</i><o:p></o:p></span></p> | ||
− | <p class="MsoListParagraphCxSpMiddle" style="text-indent:- | + | <p class="MsoListParagraphCxSpMiddle" style="text-indent:-00.0pt;mso-list:l6 level1 lfo6"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Used to immobilize | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Used to immobilize | ||
ions on a chromatography affinity column (nickel, cobalt or copper)<o:p></o:p></span></p> | ions on a chromatography affinity column (nickel, cobalt or copper)<o:p></o:p></span></p> | ||
− | <p class="MsoListParagraphCxSpLast" style="text-indent:- | + | <p class="MsoListParagraphCxSpLast" style="text-indent:-00.0pt;mso-list:l6 level1 lfo6"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Small, and easy to | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Small, and easy to | ||
add to the ends of proteins of interest<o:p></o:p></span></p> | add to the ends of proteins of interest<o:p></o:p></span></p> | ||
Line 894: | Line 891: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt;height:27.45pt"> | mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt;height:27.45pt"> | ||
− | <p class="MsoListParagraphCxSpFirst" style="text-indent:- | + | <p class="MsoListParagraphCxSpFirst" style="text-indent:-00.0pt;mso-list:l3 level1 lfo7"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">High ribosomal | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">High ribosomal | ||
recruitment efficiency<o:p></o:p></span></p> | recruitment efficiency<o:p></o:p></span></p> | ||
− | <p class="MsoListParagraphCxSpLast" style="text-indent:- | + | <p class="MsoListParagraphCxSpLast" style="text-indent:-00.0pt;mso-list:l3 level1 lfo7"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Sourced from the | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Sourced from the | ||
pET15b vectors<o:p></o:p></span></p> | pET15b vectors<o:p></o:p></span></p> | ||
Line 908: | Line 905: | ||
<p class="MsoNormal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></p> | <p class="MsoNormal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></p> | ||
<p class="MsoNormal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></p> | <p class="MsoNormal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></p> | ||
− | + | ||
− | + | ||
− | + | ||
<p class="MsoNormal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><a href="http://parts.igem.org/Part:BBa_K2417010">BBa_K2417010</a><o:p></o:p></span></p> | <p class="MsoNormal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><a href="http://parts.igem.org/Part:BBa_K2417010">BBa_K2417010</a><o:p></o:p></span></p> | ||
</td> | </td> | ||
Line 917: | Line 912: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt"> | mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt"> | ||
− | |||
− | |||
<p class="MsoNormal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></p> | <p class="MsoNormal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></p> | ||
<p class="MsoNormal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></p> | <p class="MsoNormal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></p> | ||
Line 929: | Line 922: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt"> | mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt"> | ||
− | + | <p class="MsoNormal"><i style="mso-bidi-font-style:normal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></i></p> | |
− | + | ||
− | + | ||
<p class="MsoNormal"><i style="mso-bidi-font-style:normal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></i></p> | <p class="MsoNormal"><i style="mso-bidi-font-style:normal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand"><o:p> </o:p></span></i></p> | ||
<p class="MsoNormal"><i style="mso-bidi-font-style:normal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Escherichia coli<o:p></o:p></span></i></p> | <p class="MsoNormal"><i style="mso-bidi-font-style:normal"><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Escherichia coli<o:p></o:p></span></i></p> | ||
Line 939: | Line 930: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt"> | mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt"> | ||
− | <p class="MsoListParagraphCxSpFirst" style="text-indent:- | + | <p class="MsoListParagraphCxSpFirst" style="text-indent:-00.0pt;mso-list:l2 level1 lfo8"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Small periplasmic, <span class="SpellE">homodimeric</span> protein<o:p></o:p></span></p> | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Small periplasmic, <span class="SpellE">homodimeric</span> protein<o:p></o:p></span></p> | ||
− | <p class="MsoListParagraphCxSpMiddle" style="text-indent:- | + | <p class="MsoListParagraphCxSpMiddle" style="text-indent:-00.0pt;mso-list:l2 level1 lfo8"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Upon fusion to | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Upon fusion to | ||
N-terminus of protein will translocate protein to periplasm of <i style="mso-bidi-font-style:normal">E. coli</i><o:p></o:p></span></p> | N-terminus of protein will translocate protein to periplasm of <i style="mso-bidi-font-style:normal">E. coli</i><o:p></o:p></span></p> | ||
− | <p class="MsoListParagraphCxSpMiddle" style="text-indent:- | + | <p class="MsoListParagraphCxSpMiddle" style="text-indent:-00.0pt;mso-list:l2 level1 lfo8"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Periplasm is an | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Periplasm is an | ||
oxidative environment ideal for protein folding, and simplifies extraction | oxidative environment ideal for protein folding, and simplifies extraction | ||
due to eliminating the need for purifying inclusion bodies from the cytoplasm<o:p></o:p></span></p> | due to eliminating the need for purifying inclusion bodies from the cytoplasm<o:p></o:p></span></p> | ||
− | <p class="MsoListParagraphCxSpLast" style="text-indent:- | + | <p class="MsoListParagraphCxSpLast" style="text-indent:-00.0pt;mso-list:l2 level1 lfo8"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Periplasm has | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Periplasm has | ||
reduced proteases<o:p></o:p></span></p> | reduced proteases<o:p></o:p></span></p> | ||
Line 985: | Line 976: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt"> | mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt"> | ||
− | <p class="MsoListParagraphCxSpFirst" style="text-indent:- | + | <p class="MsoListParagraphCxSpFirst" style="text-indent:-00.0pt;mso-list:l0 level1 lfo9"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Can be fused to the | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Can be fused to the | ||
N-terminus of proteins to induce secretion to the surrounding media when | N-terminus of proteins to induce secretion to the surrounding media when | ||
proteins are expressed in <i style="mso-bidi-font-style:normal">Bacillus | proteins are expressed in <i style="mso-bidi-font-style:normal">Bacillus | ||
subtilis</i><o:p></o:p></span></p> | subtilis</i><o:p></o:p></span></p> | ||
− | <p class="MsoListParagraphCxSpLast" style="text-indent:- | + | <p class="MsoListParagraphCxSpLast" style="text-indent:-00.0pt;mso-list:l0 level1 lfo9"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Eliminates many | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Eliminates many | ||
steps in the purification process<o:p></o:p></span></p> | steps in the purification process<o:p></o:p></span></p> | ||
Line 1,027: | Line 1,018: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt;height:85.45pt"> | mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt;height:85.45pt"> | ||
− | <p class="MsoListParagraphCxSpFirst" style="text-indent:- | + | <p class="MsoListParagraphCxSpFirst" style="text-indent:-00.0pt;mso-list:l4 level1 lfo10"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Sequence for which | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Sequence for which | ||
TEV protease is specific to<o:p></o:p></span></p> | TEV protease is specific to<o:p></o:p></span></p> | ||
− | <p class="MsoListParagraphCxSpLast" style="text-indent:- | + | <p class="MsoListParagraphCxSpLast" style="text-indent:-00.0pt;mso-list:l4 level1 lfo10"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Can be added | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Can be added | ||
between protein of interest and peptides that require removal, such as | between protein of interest and peptides that require removal, such as | ||
Line 1,066: | Line 1,057: | ||
mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | mso-border-top-alt:solid windowtext .5pt;mso-border-left-alt:solid windowtext .5pt; | ||
mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt"> | mso-border-alt:solid windowtext .5pt;padding:0cm 5.4pt 0cm 5.4pt"> | ||
− | <p class="MsoListParagraphCxSpFirst" style="text-indent:- | + | <p class="MsoListParagraphCxSpFirst" style="text-indent:-00.0pt;mso-list:l8 level1 lfo3"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Linker motif used | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Linker motif used | ||
to provide spacer region<o:p></o:p></span></p> | to provide spacer region<o:p></o:p></span></p> | ||
− | <p class="MsoListParagraphCxSpMiddle" style="text-indent:- | + | <p class="MsoListParagraphCxSpMiddle" style="text-indent:-00.0pt;mso-list:l8 level1 lfo3"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Used to expose | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Used to expose | ||
affinity purification tags such as 6x His tag<o:p></o:p></span></p> | affinity purification tags such as 6x His tag<o:p></o:p></span></p> | ||
− | <p class="MsoListParagraphCxSpLast" style="text-indent:- | + | <p class="MsoListParagraphCxSpLast" style="text-indent:-00.0pt;mso-list:l8 level1 lfo3"><!--[if !supportLists]--><span lang="EN-US" style="font-size:14.0pt;font-family:Symbol;mso-fareast-font-family: |
Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Serine and glycine | Symbol;mso-bidi-font-family:Symbol"><span style="mso-list:Ignore">·<span style="font:7.0pt "Times New Roman""> </span></span></span><!--[endif]--><span lang="EN-US" style="font-size:14.0pt;font-family:Quicksand">Serine and glycine | ||
used as they are small and flexible<o:p></o:p></span></p> | used as they are small and flexible<o:p></o:p></span></p> |
Revision as of 11:22, 30 October 2017
GOLD
PART NAME / |
|
|
|
|
|
Novel short chain insulin
analogue (Winsulin) with a 12AA linker YncM secretion tag to
translocate protein into media N-terminal 6x His Tag
purification 4x GSS flexible linker TEV protease cleavage site Extended ribosome binding site |
We
demonstrated that it works: · We tested it in
insulin-sensitive cell lines and saw an increase in glycogen synthesis and
glucose oxidation above basal levels, proving its bioactivity · We showed via an
ELISA assay that whilst the cell lysate did not contain Winsulin,
the media in which the cells were growing did. Therefore
the YncM secretion tag worked as expected The
results for these assays can be found here |
|
|
Human proinsulin N-terminal Ecotin
tag for targeting proteins to the periplasm N-terminal 6x His tag 4x GGS flexible linker trypsin protease cleavage site
for His-tag and C-peptide cleavage Extended ribosomal binding
site |
We
improved previous parts: BBa_M39904 and BBa_M1877 by: completing their sequence Adding a periplasmic
transporter tag (for more efficient folding in an oxidative environment) Adding an efficient ribosomal binding
site Adding an N-terminal His tag
for purification We
demonstrated that it works: · By testing it
insulin-sensitive cell lines and saw an increase in glycogen synthesis and
glucose oxidation above basal levels, therefore proving its bioactivity The
results for these assays can be found here |
|
|||
|
|
Human proinsulin N-terminal 6x His tag 4x GGS flexible linker Trypsin protease cleavage site
for His-tag and C-peptide cleavage Extended ribosomal binding
site |
We
improved previous parts: BBa_M39904 and BBa_M1877 by: · completing their
sequence · Adding an efficient
ribosomal binding site · Adding an
N-terminal His tag for purification We demonstrated that it works: · By testing it insulin-sensitive
cell lines and saw an increase in glycogen synthesis and glucose oxidation
above basal levels, therefore proving its bioactivity The
results for these assays can be found here |
SILVER
PART NAME / |
|
|
|
Cytoplasmic-Winsulin |
|
Novel single chain insulin
analogue (Winsulin) with a 12AA linker (QRGGGSGGGQRR) N-terminal 6x His Tag 4x GSS flexible linker TEV protease cleavage site Extended ribosome binding site |
· We validated our
parts by showing that they work in producing insulin. We performed an ELISA
assay testing for properly folded insulin, and detected the presence of
Cytoplasmic Winsulin. The
results for the assay can be found here |
BRONZE
PART NAME / |
|
|
|
Ecotin-Winsulin |
|
Novel single chain insulin
analogue (Winsulin) with a 12AA linker (QRGGGSGGGQRR) N-terminal Ecotin
tag for targeting proteins to the periplasm N-terminal 6x His Tag 4x GSS flexible linker TEV protease cleavage site Extended ribosome binding site |
We submitted this DNA part to
the registry, for other teams to use in the future |
N/A – Winsulin is self designed from literature and mammalian insulins |
BASIC PARTS
|
|
|
|
|
Glycine
Glycine Serine (x4) Linker Motif A |
Designed |
· Linker motif used
to provide spacer region · Used to expose
affinity purification tags such as 6x His tag · Serine and glycine
used as they are small and flexible |
|
Human
Proinsulin Coding Sequence |
Humans |
· Coding sequence for
human proinsulin, sourced from NCIB · Consists of A, B
and C chains, but C-peptide is cleaved out · Contains 3 disulphide bonds · Contains arginine
residues adjacent to C-peptide to allow cleavage |
|
Winsulin – Single Chain Insulin Analogue |
Designed |
· Consists of short
linker peptide instead of C-peptide · Does not require
cleavage therefore simplifies production procedures · Linker peptide
raises pI of insulin analogue (long lasting after
administration) · Increased thermostability (based on other single chain insulin
analogues tested) |
|
6x
Poly-Histidine Tag codon optimized for use in E. coli |
|
· Codon optimized for
use in E. coli · Used to immobilize
ions on a chromatography affinity column (nickel, cobalt or copper) · Small, and easy to
add to the ends of proteins of interest |
|
|
T7
major capsid protein |
· High ribosomal
recruitment efficiency · Sourced from the
pET15b vectors |
|
Ecotin Periplasmic Signal Peptide |
Escherichia coli |
· Small periplasmic, homodimeric protein · Upon fusion to
N-terminus of protein will translocate protein to periplasm of E. coli · Periplasm is an
oxidative environment ideal for protein folding, and simplifies extraction
due to eliminating the need for purifying inclusion bodies from the cytoplasm · Periplasm has
reduced proteases |
|
YncM Bacillus Secretion Peptide |
Bacillus subtilis |
· Can be fused to the
N-terminus of proteins to induce secretion to the surrounding media when
proteins are expressed in Bacillus
subtilis · Eliminates many
steps in the purification process |
|
TEV
Protease Cleavage Sequence |
N/A |
· Sequence for which
TEV protease is specific to · Can be added
between protein of interest and peptides that require removal, such as
purification tags |
|
Glycine
Glycine Serine (x4) Linker Motif
B |
Designed |
· Linker motif used
to provide spacer region · Used to expose
affinity purification tags such as 6x His tag · Serine and glycine
used as they are small and flexible |