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<center><h1>How to read a Patent</hi></center> | <center><h1>How to read a Patent</hi></center> | ||
<h4><div align="justify"><br><br>In constructing the sequence of a single chain insulin we had to ensure that our sequence was not under any existing patents so that we could submit our design into the Open Source iGEM registry. With a bit of help from Maxwell Lawyers (link to our integrated human practices) we went through several single chain insulin patents and made sure our work didn’t come under any existing claims. </h4></div> | <h4><div align="justify"><br><br>In constructing the sequence of a single chain insulin we had to ensure that our sequence was not under any existing patents so that we could submit our design into the Open Source iGEM registry. With a bit of help from Maxwell Lawyers (link to our integrated human practices) we went through several single chain insulin patents and made sure our work didn’t come under any existing claims. </h4></div> |
Revision as of 14:59, 25 October 2017
How to read a Patent
In constructing the sequence of a single chain insulin we had to ensure that our sequence was not under any existing patents so that we could submit our design into the Open Source iGEM registry. With a bit of help from Maxwell Lawyers (link to our integrated human practices) we went through several single chain insulin patents and made sure our work didn’t come under any existing claims.
In constructing the sequence of a single chain insulin we had to ensure that our sequence was not under any existing patents so that we could submit our design into the Open Source iGEM registry. With a bit of help from Maxwell Lawyers (link to our integrated human practices) we went through several single chain insulin patents and made sure our work didn’t come under any existing claims.
Single Chain Insulin with high
bioactivity
Patent No: US 9458,220 B2
October 4th
2016
CLAIM |
COMPARISON WITH OUR SEQUENCE |
Y/N |
A single chain insulin agonist analogue with stricture of B-LM-A
wherein B represents an insulin B chain comprising
the sequence R22X25LCGX29… and A represents an insulin A chain
comprising the sequence GIVX4X5CCX8…-R13 |
Both insulin A and B chains involve R groups which stand for
modifications eg. carboxylation. As our insulin B chain does not contain any modifications (except
an additional glycine at the A chain), our construct is outside the patent |
N |
Furthermore the linking moiety linking the carboxy
terminus of the B chain to the amino terminus of the A chain; further wherein
the linking moiety is an 8 amino acid sequence comprising of the sequence X51X52GSSSX57X58
wherein X51 = group consisting of glycine, alanine, valine,
leucine, isoleucine, isoleucine and ornithine X52 = any amino acid other than tyrosine X57 and X58 are independently selected
form the ground consisting of arginine, lysine and ornithine |
Our amino acid sequence is squarely
outside the scope of 8 amino acids. Even if we did fall within the claim; we do not contain the 8 amino acid sequence using both potential orientations X51 is glutamine or arginine in our sequence B-chain – QR . . . RR – A-chain |
N |
The LM also requires the sequence of GAGSSSRR or a sequence that
differs from GAGSSRR by 1 or 2 amino acids |
Our sequence is 12 amino acids long and differs by more than 4
amino acids. |
N |
LM represents linking moiety linking the carboxyl terminus of
the B chain to the amino terminus of the a chain,
wherein said linking moiety is an 8
amino acid sequence consisting of X51X52X53X54...
wherein X51 is selected
from the group consisting of glycine, alanine, valine, leucine, isoleucine
and proline… |
Similarly, the patent claim is over an 8 amino
acid sequence. Applying the same principle our; X51 is glutamine or arginine (depending on
orientation) and outside the scope |
N |
LEE ET
AL.
Single Chain Insulin Analog and
a polynucleotide sequence encoding the analog
Patent No: US 6,630,348 B1
October 7th
2003
CLAIM |
COMPARISON WITH OUR SEQUENCE |
Y/N |
A single chain insulin analogue
compound of formula (I) having the properties of greater insulin receptor
binding activity than proinsulin and less insulin receptor binding activity
than insulin:
|
General B – X – A chain single chain formula |
Y |
B and A chain are human
insulin chains, respectively and, |
Our B and A chain are human
insulin chains although our A chain includes a modification (additional
glycine) |
N |
X is a joining peptide of
about 5 to 18 amino acids comprising the following sequence: Gly-Gly-Gly-Pro-Gly- Lys-Arg |
Where the term ‘comprising’ is included, the patent requires that the specific sequence named MUST be part
of the linker region. Although our sequence is 12
amino acids long, it does not contain the ‘GGGPGLR’ identified in the patent |
N |
LEE ET
AL.
Single Chain Insulin Analogs
Patent No: EP 1 193 272 B1
October 30th
2004
CLAIM |
COMPARISON WITH OUR SEQUENCE |
Y/N |
A single chain insulin
analogue compound of formula (I) having the properties of greater insulin
receptor binding activity than prosinsulin and less
insulin receptor binding activity than insulin: B Chain – UI – Zn – Y – ZI – Un – A chain |
|
|
B and A chain are human
insulin chains respectively and |
We have a modified A chain |
N |
U is an arginine or lysine
residue |
Our ‘U’
is glutamine |
N |
Z is a glycine |
Z Is Glycine |
Y |
I is
an integer of 2 –
n N is an integer of 0 or 2 and |
The maximum size of the linker
sequence when considering this is 9 amino acids. Since our sequence is 12
amino acids they are outside the scope |
N |
Y is glycine-proline-glycine, or alanine-proline-glycine-aspartic acid–valine, or tyrosine-proline-glycine-aspartic acid-valine, or histidine-proline-glycine-aspartic acid-valine. |
Our sequence has no proline |
N |
KJELDSEN
ET AL.
Single Chain insulin
Patent No: EP 1692168 B1
December 3rd, 2004
CLAIM |
COMPARISON WITH OUR SEQUENCE |
Y/N |
B(1-26)- X1
- X2 - X3- X4- A (1-21),
|
B - linker - A formula |
Y |
|
|
N |
|
In our sequence construct – the A chain is 22 amino acids
long. Just like in the B-chain (it only covers a TOTAL of 21 AA). Even though
our A chain contains the addition of an amino acid (glycine), the length is
too long for the patent to operate over. |
N |
|
We have 2 adjacent basic amino
acid residues and the affinity cannot be tested |
N |
|
|
N |
|
|
N |
|
X3 is glycine |
N |
X4 is a
peptide sequence with the following formula Xa-Xb-Xc-Xd-Xe-XfXg (SEQ
ID NO:129) wherein Xa is selected from the group
consisting of L, R, T, A, H, Q, G, S and V; Xb is selected from the group
consisting of W, G, S, A, H, R, and T; Xc is selected from the group
consisting of L, Y, M, H, R, T, Q, K, V, S, A, G and P; Xd is selected from the group
consisting of R, A, Y, M, S, N, H, and G; Xe is selected from the group
consisting of S, R, A, T, K, P, N, M, H, Q, V, and G; Xf is selected from the group
consisting of G and A; and Xg is selected from the group
consisting of K, R, P, H, F, T, I, Q, W, and A, |
The total linker length that
can be formulated from Xa – Xg is 7 amino acids with the three other
residues for X1 – X3. This totals to a maximum linker
length of 10 amino acids. Our linker is 12
amino acids long. |
N |
WEISS
ET AL.
Fibrillation-resistant insulin
and insulin analogues
Patent No:EP 2074140 B1
April 6th, 2009
CLAIM |
COMPARISON WITH OUR SEQUENCE |
Y/N |
|
Our linker is truncated from
the entire C-peptide to 12 amino acids and has the general formula of B-X-A
where our linker is QRGGGSGGGQRR |
Y |
wherein the truncated linker
is a polypeptide selected from the group consisting of: |
||
a polypeptide having the
sequence GGGPRR |
|
N |
a polypeptide having the
sequence GGPRR |
|
N |
a polypeptide having the
sequence GSEQRR |
|
N |
a polypeptide having the
sequence RREQR |
|
N |
a polypeptide having the
sequence RREALQKR |
|
N |
a polypeptide having the
sequence GAGPRR |
|
N |
a polypeptide having the
sequence GPRR |
|
N |
wherein the insulin B-chain
polypeptide optionally contains one or more of: an aspartate substitution at
the position corresponding to position B10 of insulin, a lysine or an aspartate
substitution at the position corresponding to position B28 of insulin, and a proline substitution at the
position corresponding to position B29 of insulin |
Our B-chain is native human
insulin |
N |
|
Our A-chain does not contain
the relevant substitution and only an additional glycine |
N |
STOWELL
ET AL.
Chemically and thermodynamically
stable insulin analogues and improved
methods for their production
Patent No: US 9006176 B2
October 16th
2012
CLAIM |
COMPARISON WITH OUR SEQUENCE |
Y/N |
A single chain insulin (SCI)
compound of formula a(I): B chain - C’ – A Chain (Formula (I)) having the properties of
higher affinity for the insulin receptor and lower affinity for the IGF-1
receptor as compared to those of native proinsulin with chemical and
thermodynamic degradation profiles such that the SCI can be formulated and
stored for extended periods of time without refrigeration; |
Correct linker formulation of
B-linker-A |
Y |
W herein B chain and A chain
are modified human insulin chains; and |
|
Y |
Wherein C’ covalently links the
C-terminus of the B chain to the N-terminus of the A chain, and is a peptide
of 5 amino acids comprising the following sequence: Y-P-G-D-X (SEQ ID NO: 1);
wherein X is any amino acid; |
No proline (P) and no aspartic
acid (D) |
N |
wherein the B chain is
modified from a native human insulin B chain (SEQ ID NO:11), and A chain is
modified from a native human insulin A chain (SEQ ID NO:10), wherein the
modifications comprise one or more mutations at (1) Gln5, Gln15, Asn18, or
Asn21 of SEQ ID NO:10, or (2) Asn3 or Gln5 of SEQ ID
NO:11; resulting in enhanced resistance to deamidation. |
B is not modified and A chain
does not have similar modifications, rather an addition at residue 1 without
the purpose of resisting deamination. |
N |