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+ | <div class="column full_size" > | ||
+ | <h1> Project Description </h1> | ||
+ | <div class="myWords"> | ||
+ | <p> | ||
+ | Bear bile, one of the most famous animal drugs in Traditional Chinese Medicine (TCM), has been recorded in ancient Chinese medicine book as a significant method to treat hepatic and biliary disorders. UDCA, the effective ingredient of bear bile.Aside from the traditional use of bear bile in Chinese medicine, UDCA(ursodeoxycholic acid), the effective ingredient of bear bile acid, has a much larger pharmaceutical application. As well as the usage of UDCA in dissolving gallstone, its efficacy in primary biliary cirrhosis and primary sclerosing cholangitis (PSC) as an adjunct to medical therapy has been well established. Newer indications include its use in the management of chronic hepatitis, cirrhosis, post liver transplant rejection, graft-versus-host disease and acute viral hepatitis, where it not only relieves symptoms of cholestasis but also arrests ongoing hepatocyte necrosis. However, the increasing demand for bear bile has caused bears to be in an endangered state: bear poaching and illegal animal trade have greatly dwindled the number of the wild Asiatic black bear. Apart from that, bear bile farming industry in Asia extracts bile through “milking” from the bears, which is operated through surgically implanting a permanent catheter in the animal's gallbladder to obtain the drips. It is unquestionable that the bear bile farming process will lead to both physical and psychological damage in bears. | ||
+ | </p> | ||
+ | <p> | ||
+ | To find substitute or alternative for bear bile farming, our team will be working on the biological synthesis of the main effective component of this important medicine, UDCA(Ursodeoxycholic Acid). This biological approach will not only be more efficient but also be cheaper than the original chemical approach, which is widely used in the current UDCA synthesis industry. | ||
+ | </p> | ||
+ | <p> | ||
+ | We found that it is possible to convert the main component of poultry bile, CDCA(Chenodeoxycholic Acid), into UDCA, by employing two enzyme-catalyzed the reactions. First, two enzymes was employed to manage the transformation of CDCA to 7oxo-LCA. In the present of 7a-HSD(7alpha-hydroxysteroid dehydrogenase), CDCA is transformed in to 7oxo-LCA by loosing a pair of hydrogen(2H+ and 2e-), the pair of hydrogen is added to NAD+, the cofactor and the acceptor. The NAD+ is transformed into NADH during the reaction. To regenerate the NAD+ and recycle the reaction, to , the LDH(Lactate dehydrogenase) works on pyruvate and take the pair of hydrogen from NADH and transform the pyruvate to lactate and NADH to NAD+. | ||
+ | In the second step, the 7oxo-LCA is transformed to UDCA by 7β-HSDH(7beta-hydroxysteroid dehydrogenase)and GDH(glutamate dehydrogenase).The 7β-HSDH works on 7oxo-LCA and take a pair of hydrogen from NADPH(the cofactor for the second step)and add it to 7oxo-LCA and form a beta position 7-hydroxyl group, which is our target product UDCA. The GDH works on glucose and take a pair of hydrogen from it and add it to the NADP+, to form NADPH to manage the regeneration of cofactor NADPH for the second step. | ||
+ | </p> | ||
+ | <p> | ||
+ | Our mission is to express the four enzymes 7α-HSDH (from ecoli DH5a), 7β-HSDH (from Ruminococcus Torques), GDH (from Bacillus subtilis), and LDH from (Lactobacillus delbruechii subsp. Bulgaricus)and test their activities. By adding the CBD( cellulose binding domain)sequnence to the plasmid we construct, we manage to bind our enzyme on gauze. This specific design excels in 3 specific ways: first, by controlling the presence of the gauze in the solution, we can control the process of the reaction. Second, when the target enzyme is bound to cellulose we manage to purify the protein we express. Third, the enzyme binding gauze is employed to a machine including the reaction efficiency measuring system and the enzyme addition controlling system will be made. | ||
+ | </p> | ||
+ | </div> | ||
+ | </div> | ||
+ | <!-- | ||
+ | <div class="clear"></div> | ||
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− | <div class="column | + | <h5>Before you start: </h5> |
− | < | + | <p> Please read the following pages:</p> |
− | + | ||
− | <p> | + | |
− | + | ||
− | + | ||
− | + | ||
<ul> | <ul> | ||
− | <li> | + | <li> <a href="https://2017.igem.org/Competition">Competition Hub</a> </li> |
− | < | + | <li> <a href="https://2017.igem.org/Competition/Deliverables/Wiki">Wiki Requirements page</a></li> |
− | <li> | + | <li> <a href="https://2017.igem.org/Resources/Template_Documentation">Template documentation</a></li> |
− | <li> | + | |
</ul> | </ul> | ||
+ | </div> | ||
− | + | <div class="column half_size" > | |
+ | <div class="highlight"> | ||
+ | <h5> Styling your wiki </h5> | ||
+ | <p>You may style this page as you like or you can simply leave the style as it is. You can easily keep the styling and edit the content of these default wiki pages with your project information and completely fulfill the requirement to document your project.</p> | ||
+ | <p>While you may not win Best Wiki with this styling, your team is still eligible for all other awards. This default wiki meets the requirements, it improves navigability and ease of use for visitors, and you should not feel it is necessary to style beyond what has been provided.</p> | ||
+ | </div> | ||
</div> | </div> | ||
− | <div class="column full_size" > | + | <div class="column full_size" > |
+ | <h5> Wiki template information </h5> | ||
+ | <p>We have created these wiki template pages to help you get started and to help you think about how your team will be evaluated. You can find a list of all the pages tied to awards here at the <a href="https://2017.igem.org/Judging/Pages_for_Awards">Pages for awards</a> link. You must edit these pages to be evaluated for medals and awards, but ultimately the design, layout, style and all other elements of your team wiki is up to you!</p> | ||
− | + | </div> | |
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− | |||
− | |||
− | |||
− | |||
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− | |||
+ | <div class="column half_size" > | ||
+ | <h5> Editing your wiki </h5> | ||
+ | <p>On this page you can document your project, introduce your team members, document your progress and share your iGEM experience with the rest of the world! </p> | ||
+ | <p> <a href="https://2017.igem.org/wiki/index.php?title=Team:Example&action=edit"> </a>Use WikiTools - Edit in the black menu bar to edit this page</p> | ||
− | <div | + | </div> |
− | |||
− | |||
+ | <div class="column half_size" > | ||
+ | <h5>Tips</h5> | ||
+ | <p>This wiki will be your team’s first interaction with the rest of the world, so here are a few tips to help you get started: </p> | ||
+ | <ul> | ||
+ | <li>State your accomplishments! Tell people what you have achieved from the start. </li> | ||
+ | <li>Be clear about what you are doing and how you plan to do this.</li> | ||
+ | <li>You have a global audience! Consider the different backgrounds that your users come from.</li> | ||
+ | <li>Make sure information is easy to find; nothing should be more than 3 clicks away. </li> | ||
+ | <li>Avoid using very small fonts and low contrast colors; information should be easy to read. </li> | ||
+ | <li>Start documenting your project as early as possible; don’t leave anything to the last minute before the Wiki Freeze. For a complete list of deadlines visit the <a href="https://2017.igem.org/Calendar">iGEM 2017 calendar</a> </li> | ||
+ | <li>Have lots of fun! </li> | ||
+ | </ul> | ||
</div> | </div> | ||
− | <div class="column half_size" > | + | <div class="column half_size" > |
<h5>Inspiration</h5> | <h5>Inspiration</h5> | ||
− | <p> | + | <p> You can also view other team wikis for inspiration! Here are some examples:</p> |
− | + | ||
<ul> | <ul> | ||
− | <li><a href="https:// | + | <li> <a href="https://2014.igem.org/Team:SDU-Denmark/"> 2014 SDU Denmark </a> </li> |
− | <li><a href="https:// | + | <li> <a href="https://2014.igem.org/Team:Aalto-Helsinki">2014 Aalto-Helsinki</a> </li> |
− | <li><a href="https://2014.igem.org/Team: | + | <li> <a href="https://2014.igem.org/Team:LMU-Munich">2014 LMU-Munich</a> </li> |
− | <li><a href="https://2014.igem.org/Team: | + | <li> <a href="https://2014.igem.org/Team:Michigan"> 2014 Michigan</a></li> |
+ | <li> <a href="https://2014.igem.org/Team:ITESM-Guadalajara">2014 ITESM-Guadalajara </a></li> | ||
+ | <li> <a href="https://2014.igem.org/Team:SCU-China"> 2014 SCU-China </a></li> | ||
</ul> | </ul> | ||
</div> | </div> | ||
+ | |||
+ | <div class="column half_size" > | ||
+ | <h5> Uploading pictures and files </h5> | ||
+ | <p> You can upload your pictures and files to the iGEM 2017 server. Remember to keep all your pictures and files within your team's namespace or at least include your team's name in the file name. <br /> | ||
+ | When you upload, set the "Destination Filename" to <br><code>T--YourOfficialTeamName--NameOfFile.jpg</code>. (If you don't do this, someone else might upload a different file with the same "Destination Filename", and your file would be erased!)<br><br> | ||
+ | |||
+ | <a href="https://2017.igem.org/Special:Upload"> | ||
+ | UPLOAD FILES | ||
+ | </a> | ||
+ | </p> | ||
+ | </div> | ||
+ | |||
+ | |||
+ | |||
+ | --> | ||
</html> | </html> |
Latest revision as of 09:07, 1 November 2017
Project Description
Bear bile, one of the most famous animal drugs in Traditional Chinese Medicine (TCM), has been recorded in ancient Chinese medicine book as a significant method to treat hepatic and biliary disorders. UDCA, the effective ingredient of bear bile.Aside from the traditional use of bear bile in Chinese medicine, UDCA(ursodeoxycholic acid), the effective ingredient of bear bile acid, has a much larger pharmaceutical application. As well as the usage of UDCA in dissolving gallstone, its efficacy in primary biliary cirrhosis and primary sclerosing cholangitis (PSC) as an adjunct to medical therapy has been well established. Newer indications include its use in the management of chronic hepatitis, cirrhosis, post liver transplant rejection, graft-versus-host disease and acute viral hepatitis, where it not only relieves symptoms of cholestasis but also arrests ongoing hepatocyte necrosis. However, the increasing demand for bear bile has caused bears to be in an endangered state: bear poaching and illegal animal trade have greatly dwindled the number of the wild Asiatic black bear. Apart from that, bear bile farming industry in Asia extracts bile through “milking” from the bears, which is operated through surgically implanting a permanent catheter in the animal's gallbladder to obtain the drips. It is unquestionable that the bear bile farming process will lead to both physical and psychological damage in bears.
To find substitute or alternative for bear bile farming, our team will be working on the biological synthesis of the main effective component of this important medicine, UDCA(Ursodeoxycholic Acid). This biological approach will not only be more efficient but also be cheaper than the original chemical approach, which is widely used in the current UDCA synthesis industry.
We found that it is possible to convert the main component of poultry bile, CDCA(Chenodeoxycholic Acid), into UDCA, by employing two enzyme-catalyzed the reactions. First, two enzymes was employed to manage the transformation of CDCA to 7oxo-LCA. In the present of 7a-HSD(7alpha-hydroxysteroid dehydrogenase), CDCA is transformed in to 7oxo-LCA by loosing a pair of hydrogen(2H+ and 2e-), the pair of hydrogen is added to NAD+, the cofactor and the acceptor. The NAD+ is transformed into NADH during the reaction. To regenerate the NAD+ and recycle the reaction, to , the LDH(Lactate dehydrogenase) works on pyruvate and take the pair of hydrogen from NADH and transform the pyruvate to lactate and NADH to NAD+. In the second step, the 7oxo-LCA is transformed to UDCA by 7β-HSDH(7beta-hydroxysteroid dehydrogenase)and GDH(glutamate dehydrogenase).The 7β-HSDH works on 7oxo-LCA and take a pair of hydrogen from NADPH(the cofactor for the second step)and add it to 7oxo-LCA and form a beta position 7-hydroxyl group, which is our target product UDCA. The GDH works on glucose and take a pair of hydrogen from it and add it to the NADP+, to form NADPH to manage the regeneration of cofactor NADPH for the second step.
Our mission is to express the four enzymes 7α-HSDH (from ecoli DH5a), 7β-HSDH (from Ruminococcus Torques), GDH (from Bacillus subtilis), and LDH from (Lactobacillus delbruechii subsp. Bulgaricus)and test their activities. By adding the CBD( cellulose binding domain)sequnence to the plasmid we construct, we manage to bind our enzyme on gauze. This specific design excels in 3 specific ways: first, by controlling the presence of the gauze in the solution, we can control the process of the reaction. Second, when the target enzyme is bound to cellulose we manage to purify the protein we express. Third, the enzyme binding gauze is employed to a machine including the reaction efficiency measuring system and the enzyme addition controlling system will be made.