Difference between revisions of "Team:KU Leuven/Protocols"

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                                             <li>If the cells in the 6-well had a density of 95-100%, typically seed 100-300 microliters of cells per 12-well (density depending on experimental needs)</li>
 
                                             <li>If the cells in the 6-well had a density of 95-100%, typically seed 100-300 microliters of cells per 12-well (density depending on experimental needs)</li>
 
                                             <li>Incubate at least 2 hours for cell attachment to the coverslip</li>
 
                                             <li>Incubate at least 2 hours for cell attachment to the coverslip</li>
                                        </ul>
 
                            <h2><b>Ca<sup>2+</sup> imaging</b></h2>
 
                                    <h5><b>Fura-2, AM</b> (MW: 1001,9)</h5>
 
                                        <ul>
 
                                            <li>Dilute 50 μg of Fura-2 in 50 μl DMSO (1 mM stock solution)</li>
 
                                            <li>Make aliquots of 2 μl in brown eppies and store at -20°C</li>
 
                                            <li>To load cells (1 well): add 2 μl of Fura-2 to 1 ml of medium (2μM work solution)</li>
 
                                            <li>Incubate cells for 30 minutes before measurement</li>
 
 
                                         </ul>
 
                                         </ul>
 
                             </p>
 
                             </p>
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                                 <h4>Patch clamp</h4>
 
                                 <h4>Patch clamp</h4>
 
                                     <ul>
 
                                     <ul>
                                         <li>We used whole-cell patch clamp to measure the membrane voltage and ion currents across a HEK cell membrane. To measure whole-cell, we pushed a glass pipette against the  membrane of a cell, creating a complete seal of the membrane against the pipette. Afterwards, we caused a sudden negative pressure in the glass pipette, which destroys the membrane in the opening of the glass pipette. The solution within the pipett will subsequentially mix with the intracellular compartment of the cell, allowing for measuring with a pre-defined intracellular buffer.</li>
+
                                         <li>We used whole-cell patch clamp to measure the membrane voltage and ion currents across a HEK cell membrane. To measure whole-cell, we pushed a glass pipette against the  membrane of a cell, to seal the membrane completely against the membrane. Afterwards, we caused a sudden negative pressure in the glass pipette, which destroys the membrane in the opening of the glass pipette. The solution within the pipette will subsequentially mix with the intracellular compartment of the cell, which allows us to measure with a pre-defined intracellular buffer.</li>
 
                                     </ul>
 
                                     </ul>
 
                             <h4>Voltage clamp</h4>
 
                             <h4>Voltage clamp</h4>
 
                                         <ul>
 
                                         <ul>
                                             <li>To study the currents through different ion channels with whole-cell patch clamp, we used a specific technique called "Voltage clamp". Here, we maintain a pre-defined membrane potential to study the activation of a1G, HCN2 and hERG. Each of these ion channels has a specific way to activate, which can be quantified using voltage clamp. When clamping the voltage at a certain value, a cell will adapt to the voltage by increasing or decreasing ion currents. These currents will be measured using this technique </li>  
+
                                             <li>To study the currents through different ion channels with whole-cell patch clamp, we used a specific technique called "Voltage clamp". Here, we maintain a pre-defined membrane potential to study the activation of α1G, HCN2 and hERG. Each of these ion channels has a specific way of activation, which can be quantified using voltage clamp. When clamping the voltage at a certain value, a cell will adapt to the voltage by increasing or decreasing ion currents. These currents will be measured using this technique </li>  
 
                                         </ul>
 
                                         </ul>
 
                             <h4>Current clamp</h4>
 
                             <h4>Current clamp</h4>
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                         <div class="content" style="display: none;">
 
                         <div class="content" style="display: none;">
 
                             <p style="text-align:justify">
 
                             <p style="text-align:justify">
                             <h2><b>Introduction</b></h2>
+
                             <h2><b>Ca<sup>2+</sup> imaging</b></h2>
                    </div>
+
                                    <h5><b>Fura-2, AM</b> (MW: 1001,9)</h5>
 +
                                        <ul>
 +
                                            <li>Dilute 50 μg of Fura-2 in 50 μl DMSO (1 mM stock solution)</li>
 +
                                            <li>Make aliquots of 2 μl in brown eppies and store at -20°C</li>
 +
                                            <li>To load cells (1 well): add 2 μl of Fura-2 to 1 ml of medium (2μM work solution)</li>
 +
                                            <li>Incubate cells for 30 minutes before measurement</li>
 +
                                        </ul>                    </div>
 
<br>
 
<br>
 
     <div class="experiment">
 
     <div class="experiment">

Revision as of 13:23, 4 September 2017

Protocols

In the lab, we used different experimental procedures. There are protocols for the wet and bacterial lab, for the cell culture lab and for the electrophysiology lab.

Cell Culture


Wet Lab


Electrophysiology


Calcium imaging


Intra- and extracellular buffers