Difference between revisions of "Team:Manchester/Attributions"

 
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   <h3 style="text-align:center;">Acknowledgement</h3>
 
   <h3 style="text-align:center;">Acknowledgement</h3>
 
   <p>This project wouldn't be possible without commitment and dedication from many parties. It is our greatest pleasure to acknowledge the assistance and contribution of the individuals and groups who have helped us towards the successful completion of the project.</p>
 
   <p>This project wouldn't be possible without commitment and dedication from many parties. It is our greatest pleasure to acknowledge the assistance and contribution of the individuals and groups who have helped us towards the successful completion of the project.</p>
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    <span class="border linespacingbig" style="background-color: rgba(255, 255, 255, 0.6);font-size:25px;color: #111;">WORK DONE BY TEAM MEMBERS</span>
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  <div class="txtpadding" style="color:#ddd;background-color:#282E34;text-align:center;text-align: center;">
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  <h3 style="text-align:center;color:#ddd;">Adam Hannaford</h3>
 +
  <p>Lab work on tags and their characterisation. Design of Experiment for protein expression optimisation.</p>
 +
 +
  <h3 style="text-align:center;color:#ddd;">Alice Fraser</h3>
 +
  <p>Interlab study. Lab work on Eut proteins for their characterisation.</p>
 +
 +
  <h3 style="text-align:center;color:#ddd;">Amber Hall</h3>
 +
  <p>Graphic and video editing, slide making and microscopy. Lab work. Wiki illustrations.</p>
 +
 +
  <h3 style="text-align:center;color:#ddd;">James Engleback</h3>
 +
  <p>Lab work on characterisation of PPKs. Design of Experiment for protein expression optimisation.</p>
 +
 +
  <h3 style="text-align:center;color:#ddd;">Jessica Burns</h3>
 +
  <p>Cloning of PPK and Eut parts into submission and expression vectors. Lab work on Eut proteins for their characterisation.</p>
 +
 +
  <h3 style="text-align:center;color:#ddd;">Maciej Słowiński</h3>
 +
  <p>Seeking sponsors and looking for collaborations. Building business model.</p>
 +
 +
  <h3 style="text-align:center;color:#ddd;">Ong Jun Yang</h3>
 +
  <p>Wiki development and phosphate starvation operon modelling. Lab work. 3D animations.</p>
 +
 +
  <h3 style="text-align:center;color:#ddd;">Owen Julianto Jonathan</h3>
 +
  <p>Every bit of human practices and making cost estimation from continuous culture modelling. Lab work. Wiki illustrations.</p>
 +
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  <h3 style="text-align:center;color:#ddd;">Theodore Glenaldo</h3>
 +
  <p>Interlab study and lab work. Safety forms submission. Wiki illustrations.</p>
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   <h3 style="text-align:center;color:#ddd;">Project Advisors</h3>
 
   <h3 style="text-align:center;color:#ddd;">Project Advisors</h3>
 
   <p>Eriko Takano, Rainer Breitling</p>
 
   <p>Eriko Takano, Rainer Breitling</p>
 +
  <p>Advice on everything concerning the project.</p>
  
 
   <br/>
 
   <br/>
  
 
   <h3 style="text-align:center;color:#ddd;">Project Supervisors</h3>
 
   <h3 style="text-align:center;color:#ddd;">Project Supervisors</h3>
−
   <p>Will Finnigan, Marc Biarnes-Carrera, Ross Kent, Nick Weise, Jonathan Wilkes, Adam Amara</p>
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   <p>William Finnigan, Marc Biarnes-Carrera, Ross Kent, Nicholas Weise, Jonathan Wilkes, Adam Amara</p>
 +
  <p>Advice on experimental design, troubleshooting, part assembly and characterisation, orders and deliveries, Design of Experiment, opportunities for outreach and articles.</p>
  
 
   <br/>
 
   <br/>
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   <h3 style="text-align:center;color:#ddd;">Trainings</h3>
 
   <h3 style="text-align:center;color:#ddd;">Trainings</h3>
 
   <p>Tanya Aspinall - Health & Safety induction</p>
 
   <p>Tanya Aspinall - Health & Safety induction</p>
−
   <p>Sandra taylor - Microscopy training</p>
+
   <p>Sandra Taylor - Microscopy training</p>
 
   <p>John Hughes - Ultracentrifugation training</p>
 
   <p>John Hughes - Ultracentrifugation training</p>
  
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   <br/>
 
   <br/>
  
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   <h3 style="text-align:center;color:#ddd;">Human Practices </h3>
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   <h3 style="text-align:center;color:#ddd;">Human Practices</h3>
−
   <p>Andy Balmer, Robert Meckin, Duncan Thomas</p>  
+
   <p>Dr. Andrew Balmer, Dr. Robert Meckin - on social implications of synthetic biology</p>
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  <p>Dr. Duncan Thomas - Manchester Institute of Innovation</p>
  
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  <br/>
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  <h3 style="text-align:center;color:#ddd;">Computational Modelling</h3>
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  <p>Areti Tsigkinopoulou, Aliah Hawari</p>
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  <p>Advice on computational modelling of phosphate starvation operon, sources of scripts and papers on ensemble modelling.</p>
  
 
   </div>
 
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   <h3 style="text-align:center;color:#ddd;">Fundamentals</h3>
 
   <h3 style="text-align:center;color:#ddd;">Fundamentals</h3>
−
   <p>Martin Warren - Original paper on microcompartment</p>
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   <p>Martin Warren - <a href= "https://www.ncbi.nlm.nih.gov/pubmed/28105684" 
−
   <p>Ashley Chessher - Eut plasmids and microscopy images</p>
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target= "_blank" 
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   <p>Previous work of HKU iGEM 2013, Dundee iGEM 2011, York iGEM 2015</p>
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style= "color: #5cbeff">
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Original paper on microcompartment-directed polyphosphate accumulation</a></p>
 +
   <p>Ashley Chessher - Eut plasmids and microscopy image samples</p>
 +
   <p>Inspiring previous work by HKU iGEM 2013, Dundee iGEM 2011, York iGEM 2015</p>
 +
 
 +
  <br/>
 +
 
 +
  <h3 style="text-align:center;color:#ddd;">Human Practices</h3>
 +
  <p>Professor Issy Caffoor - Ex-Innovation Manager at Yorkshire Water</p>
 +
  <p>Jonathan Abra - Knowledge Transfer Network</p>
 +
  <p>Dr. Ben Reeve - CustoMem</p>
 +
  <p>Dr. Benjamin Tam - Isle Utilities</p>
 +
  <p>Dr. David Tompkins and PhD student Katie Ward - Aqua Enviro</p>
 +
  <p>Sarah Lyons - Davyhulme Treatment Works</p>
 +
  <p>Dr. Rick Watson - University of Manchester Intellectual Property (UMIP)</p>
 +
  <p>Dr. Linda Kahl - BioBricks Foundation</p>
 +
  <p>Department of Environment, Food and Rural Affairs (DEFRA)</p>
 +
 
 +
  <br/>
 +
 
 +
  <h3 style="text-align:center;color:#ddd;">Suppliers/ Sponsors</h3>
 +
  <p>New England Biolabs, Qiagen, Promega, IDT, BioCatNet, IBCarb, Snapgene, Mathworks, Agilent</p>
 +
  <p>The University of Manchester, Manchester Metropolitan University</p>
  
 
   <br/>
 
   <br/>
  
−
   <h3 style="text-align:center;color:#ddd;">Suppliers/Sponsors</h3>
+
   <h3 style="text-align:center;color:#ddd;">Design of Experiment (DoE)</h3>
−
   <p>New England Biolabs, Qiagen, Promega, IDT, Snapgene</p>
+
   <p>Dr Markus Gershater - Synthace Ltd</p>
 +
  <p> </p>
  
 
   <br/>
 
   <br/>
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   <h3 style="text-align:center;color:#ddd;">Software</h3>
 
   <h3 style="text-align:center;color:#ddd;">Software</h3>
 
   <p>CellProfiller: pipeline used in the paper "Evidence for Improved Encapsulated Pathway Behavior in a Bacterial Microcompartment through Shell Protein Engineering" published in ACS Synthetic Biology</p>
 
   <p>CellProfiller: pipeline used in the paper "Evidence for Improved Encapsulated Pathway Behavior in a Bacterial Microcompartment through Shell Protein Engineering" published in ACS Synthetic Biology</p>
−
   <p>by Chuchu Zhang, Christopher Jakobson, Marilyn Slininger Lee and Danielle Tullman-Ercek </p>
+
   <p>by Chuchu Zhang, Christopher Jakobson, Marilyn Slininger Lee and Danielle Tullman-Ercek</p>
 
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     <span class="border linespacingbig">THANKS A MILLION!</span>
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     <span class="border linespacingbig">THANKS FOR MAKING THIS PROJECT POSSIBLE!</span>
 
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{{:Team:Manchester/Templates/Footer}}

Latest revision as of 03:18, 2 November 2017

HOME
TEAM
PROJECT
Overview
Description
Results
Demonstration
Medal Criteria
Achievement
NOTEBOOK
Protocols
Diary
Lab Book
InterLab
Measurement
PARTS
Parts
Basic Parts
Composite Parts
Improved Parts
Part Collection
HUMAN PRACTICES
Silver HP
Water Industry
Integrated and Gold
Intellectual Property
Public Engagement
Entrepreneurship
MODELLING
Overview
D. O. Experiment
Continuous Culture
PHO Operon
JUDGING FORM
ATTRIBUTION

Acknowledgement

This project wouldn't be possible without commitment and dedication from many parties. It is our greatest pleasure to acknowledge the assistance and contribution of the individuals and groups who have helped us towards the successful completion of the project.

WORK DONE BY TEAM MEMBERS

Adam Hannaford

Lab work on tags and their characterisation. Design of Experiment for protein expression optimisation.

Alice Fraser

Interlab study. Lab work on Eut proteins for their characterisation.

Amber Hall

Graphic and video editing, slide making and microscopy. Lab work. Wiki illustrations.

James Engleback

Lab work on characterisation of PPKs. Design of Experiment for protein expression optimisation.

Jessica Burns

Cloning of PPK and Eut parts into submission and expression vectors. Lab work on Eut proteins for their characterisation.

Maciej Słowiński

Seeking sponsors and looking for collaborations. Building business model.

Ong Jun Yang

Wiki development and phosphate starvation operon modelling. Lab work. 3D animations.

Owen Julianto Jonathan

Every bit of human practices and making cost estimation from continuous culture modelling. Lab work. Wiki illustrations.

Theodore Glenaldo

Interlab study and lab work. Safety forms submission. Wiki illustrations.

INTERNAL RESOURCES

Research Institute

Manchester Institute of Biotechnology (MIB)


Project Advisors

Eriko Takano, Rainer Breitling

Advice on everything concerning the project.


Project Supervisors

William Finnigan, Marc Biarnes-Carrera, Ross Kent, Nicholas Weise, Jonathan Wilkes, Adam Amara

Advice on experimental design, troubleshooting, part assembly and characterisation, orders and deliveries, Design of Experiment, opportunities for outreach and articles.


Team Members

Adam Hannaford, Alice Fraser, Amber Hall, James Engleback, Jessica Burns, Maciej Słowiński, Ong Jun Yang, Owen Julianto Jonathan, Theodore Glenaldo


Trainings

Tanya Aspinall - Health & Safety induction

Sandra Taylor - Microscopy training

John Hughes - Ultracentrifugation training


Finance

Louise Barnes, Lisa Beattie


Human Practices

Dr. Andrew Balmer, Dr. Robert Meckin - on social implications of synthetic biology

Dr. Duncan Thomas - Manchester Institute of Innovation


Computational Modelling

Areti Tsigkinopoulou, Aliah Hawari

Advice on computational modelling of phosphate starvation operon, sources of scripts and papers on ensemble modelling.

EXTERNAL RESOURCES

Fundamentals

Martin Warren - Original paper on microcompartment-directed polyphosphate accumulation

Ashley Chessher - Eut plasmids and microscopy image samples

Inspiring previous work by HKU iGEM 2013, Dundee iGEM 2011, York iGEM 2015


Human Practices

Professor Issy Caffoor - Ex-Innovation Manager at Yorkshire Water

Jonathan Abra - Knowledge Transfer Network

Dr. Ben Reeve - CustoMem

Dr. Benjamin Tam - Isle Utilities

Dr. David Tompkins and PhD student Katie Ward - Aqua Enviro

Sarah Lyons - Davyhulme Treatment Works

Dr. Rick Watson - University of Manchester Intellectual Property (UMIP)

Dr. Linda Kahl - BioBricks Foundation

Department of Environment, Food and Rural Affairs (DEFRA)


Suppliers/ Sponsors

New England Biolabs, Qiagen, Promega, IDT, BioCatNet, IBCarb, Snapgene, Mathworks, Agilent

The University of Manchester, Manchester Metropolitan University


Design of Experiment (DoE)

Dr Markus Gershater - Synthace Ltd


Software

CellProfiller: pipeline used in the paper "Evidence for Improved Encapsulated Pathway Behavior in a Bacterial Microcompartment through Shell Protein Engineering" published in ACS Synthetic Biology

by Chuchu Zhang, Christopher Jakobson, Marilyn Slininger Lee and Danielle Tullman-Ercek

THANKS FOR MAKING THIS PROJECT POSSIBLE!