Difference between revisions of "Team:SUSTech Shenzhen/Description"

 
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<html><center><h1>Check List<h1></center></html>
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<html>
 
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<div class="row">
=For a Bronze Medal=
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<div class="col-md-8 col-md-offset-2">
 
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<img class="img-responsive" src="https://static.igem.org/mediawiki/2017/2/2d/T--SUSTech_Shenzhen--Comics.jpg" alt="Comics">
==√Register the team successfully==
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</div>
 
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</div>
==√Deliverables:==
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</html>
1.Document our project on wiki 链接wiki
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2.Attribution and acknowledgement page  <html><a href="https://2017.igem.org/Team:SUSTech_Shenzhen/Attributions">Attribution Page</a></html>
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3.Poster and presentation at iGEM jamboree
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4.Complete and submit iGEM 2017 Judging form and safety form <html><a href="https://igem.org/2017_Judging_Form?id=2492">Judging_Form</a></html>  <html><a href="https://2017.igem.org/Safety/Final_Safety_Form?team_id=2492">Safety_Form</a></html> 
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5.Document Part pages on the Registry
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6.Submit DNA samples of Biobricks to registry
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==√Characterization / Contribution:==
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1.Participate in the Interlab Measurement <html><a href="https://2017.igem.org/Team:SUSTech_Shenzhen/InterLab">InterLab</a></html> 
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2.Submitted five new standard BioBrick central to our project
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Part Number:
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<partinfo>BBa_K2492000</partinfo>
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<partinfo>BBa_K2492001</partinfo>
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<partinfo>BBa_K2492002</partinfo>
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<partinfo>BBa_K2492003</partinfo>
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<partinfo>BBa_K2492004</partinfo>
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3.Successfully entered information on the newly characterised part's Main Page in
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registry
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-------------------------
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=For a Silver Medal=
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==√Validated Part / Validated Contribution:==
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Documents more than one new standard BioBrick central to our project on main page Part Number: 写序号带超链接
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==√Collaboration:==
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Successfully aided the core plasmid construction of SIAT-SCIE 链接自己的wiki和深国交的wiki hp 注意让他们写鸣谢我们
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==√Human Practices:==
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=<i>“Having only 302 neurons, C. elegans is a good learner.”</i>=
Successfully deliver a neuroimaging lecture with professor Li of SZU
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Successfully spread theory of synthetic biology through lecture to junior high school <html><a href="https://2017.igem.org/Team:SUSTech_Shenzhen/HP/Silver">See details</a></html> 
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Learning is the act of acquiring new or modifying and reinforcing existing knowledge, behaviors, skills, values, or preferences which may lead to a potential change in synthesizing information, depth of the knowledge, attitude or behavior relative to the type and range of experience<ref>Richard Gross, Psychology: The Science of Mind and Behaviour 6E, Hachette UK, ISBN 9781444164367</ref>.
  
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The learning behavior of <i><B>C. elegans (Caenorhabditis elegans)</B></i> has been studied for a long time. Worms are demonstrated to possess both non-associative and associative learnings induced by intermittent stimulation of chemicals or heavy metals <ref>Rankin C H ,Beck C D O ,Chiba C M .Caenorhabditis elegans : A new model system for the study of learning and memory [J].BehavBrainRes,1990,37(1):89-92. </ref>.
=For a Gold Medal=
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==√Integrated Human Practices:==
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However, the main drawback of these studies is chemical stimuli cannot be withdrew cleanly. The the residual chemicals will make it impossible to avoid the stimuli cross-contamination. They will make the results difficult to interpret.  We use synthetic biology method to establish to overcome this obstacle.  The key components that help us solve this issue are <html><a href="https://2017.igem.org/Team:SUSTech_Shenzhen/Hardware">hardware</a> and <a href="https://2017.igem.org/Team:SUSTech_Shenzhen/Model">model:</a></html>
  
Successful communicate with a behavioral psychology professor Peng Li of SZU and revise designs
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<B>Optogenetics:</B>
  
Successful participate in Conference of China iGEMer Community and improve the designs
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Expression of two types of channelrhodopsins in two pairs of receptor neurons enable us to use blue and red lights to train worms, for example, to be addicted to alcohol.
hplink <html><a href="https://2017.igem.org/Team:SUSTech_Shenzhen/HP/Gold_Integrated">See details</a></html> 
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==√Improve a previous part or successfully improve the function and characterization of a existing BioBrick Part ==
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<B>Microfluidics:</B>
  
Improved and characterised part: 链接egf 被改动的别的队的链接 的part
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Two microfluidic chips are designed to study worms’ behavior change at the group level and measure the activation signal of individual neuron after stimulation.
  
Our new part:  <html><a href="http://parts.igem.org/Part:BBa_K2005050">BBa_K2005050</a></html>  
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So far, our project has been almost completed. With the expression of Chrimson and CoChR on AWA and AWB neurons <ref>BargmannCI,HartwiegE,HorvitzHR (1993) Odorant-selectivegenesand neurons mediate olfaction in <i>C. elegans</i>. Cell 74:515–527.</ref>, <i>C. elegans</i> shows preference to the blue light and repulsion to red light.  After induced by the blue light for 2 hours, the engineered worms are strongly attracted by alcohol, while the wild worms have no preference to it.
  
==√Model your project:Successfully document model’s contribution to our project on wiki==
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Thus, our project demonstrates the establishment of light-inducing learning process in <i>C. elegans</i>.<html><a href="https://2017.igem.org/Team:SUSTech_Shenzhen/Demonstrate">See details </a></html>
<html><a href="https://2017.igem.org/Team:SUSTech_Shenzhen/Model">Model Overview Page</a></html>
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==√Demonstrate your work: Successfully demonstrate functional role of our project and prove our project works ==
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Our further work is to decipher the change of neuron connectivity due to the newly learned behavior. Using the optofluidics platform above, we are able to analyze the activation of downstream neurons in the new-formed or modulated neural circuit. <html><a href="https://2017.igem.org/Team:SUSTech_Shenzhen/Neuron_Network_Model">See details </a></html>
<html><a href="https://2017.igem.org/Team:SUSTech_Shenzhen/Demonstrate">Demonstrate Page</a></html>
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=Special Prizes=
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== References ==
  
==√Modeling==
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<references />
==√Hardware==
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Latest revision as of 16:45, 14 December 2017

Team SUSTC-Shenzhen

Description

Overiew


Comics

“Having only 302 neurons, C. elegans is a good learner.”

Learning is the act of acquiring new or modifying and reinforcing existing knowledge, behaviors, skills, values, or preferences which may lead to a potential change in synthesizing information, depth of the knowledge, attitude or behavior relative to the type and range of experience[1].

The learning behavior of C. elegans (Caenorhabditis elegans) has been studied for a long time. Worms are demonstrated to possess both non-associative and associative learnings induced by intermittent stimulation of chemicals or heavy metals [2].

However, the main drawback of these studies is chemical stimuli cannot be withdrew cleanly. The the residual chemicals will make it impossible to avoid the stimuli cross-contamination. They will make the results difficult to interpret. We use synthetic biology method to establish to overcome this obstacle. The key components that help us solve this issue are hardware and model:

Optogenetics:

Expression of two types of channelrhodopsins in two pairs of receptor neurons enable us to use blue and red lights to train worms, for example, to be addicted to alcohol.

Microfluidics:

Two microfluidic chips are designed to study worms’ behavior change at the group level and measure the activation signal of individual neuron after stimulation.

So far, our project has been almost completed. With the expression of Chrimson and CoChR on AWA and AWB neurons [3], C. elegans shows preference to the blue light and repulsion to red light. After induced by the blue light for 2 hours, the engineered worms are strongly attracted by alcohol, while the wild worms have no preference to it.

Thus, our project demonstrates the establishment of light-inducing learning process in C. elegans.See details

Our further work is to decipher the change of neuron connectivity due to the newly learned behavior. Using the optofluidics platform above, we are able to analyze the activation of downstream neurons in the new-formed or modulated neural circuit. See details

References

  1. Richard Gross, Psychology: The Science of Mind and Behaviour 6E, Hachette UK, ISBN 9781444164367
  2. Rankin C H ,Beck C D O ,Chiba C M .Caenorhabditis elegans : A new model system for the study of learning and memory [J].BehavBrainRes,1990,37(1):89-92.
  3. BargmannCI,HartwiegE,HorvitzHR (1993) Odorant-selectivegenesand neurons mediate olfaction in C. elegans. Cell 74:515–527.

Made by from the elegans.Inc in SUSTech_Shenzhen.

Licensed under CC BY 4.0.