Difference between revisions of "Team:Austin UTexas/Model"

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<h1 style="font-family:verdana"> Why Model? </h1>
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<h2 style="font-family:verdana; font-size: 25px"> Why Model? </h2>
  
 
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Scientific models are mathematical renditions of real-world systems. In synthetic biology, models are often used to define the kinetics of biochemical systems to aid in the visualization of information, and can be used to predict the behavior or outcome of biological systems. </p>
 
Scientific models are mathematical renditions of real-world systems. In synthetic biology, models are often used to define the kinetics of biochemical systems to aid in the visualization of information, and can be used to predict the behavior or outcome of biological systems. </p>
  
<h1 style="font-family:verdana">Our Model</h1>
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<h2 style="font-family:verdana; font-size: 25px">Our Model</h2>
  
 
<p style="font-family:verdana">The goal of our model is to simulate the expected behavior of our transformed <i>Lactobacillus plantarum</i> after consumption.
 
<p style="font-family:verdana">The goal of our model is to simulate the expected behavior of our transformed <i>Lactobacillus plantarum</i> after consumption.

Revision as of 15:45, 30 October 2017

Why Model?

Scientific models are mathematical renditions of real-world systems. In synthetic biology, models are often used to define the kinetics of biochemical systems to aid in the visualization of information, and can be used to predict the behavior or outcome of biological systems.

Our Model

The goal of our model is to simulate the expected behavior of our transformed Lactobacillus plantarum after consumption. We focused on modeling the binding reaction of glutamate decarboxylate and L-glutamate, dependent on the cofactor pyridoxal- 5"phosphate (PLP). Plp binds to the C-terminal domain of the gadB. We looked specifically at how our Lactobacillus plantarum would encode the gadB gene and encode glutamate decarboxylate.