Difference between revisions of "Team:Paris Bettencourt/Improve"

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<h1> Part improved part:BBa_K1680006 </h1>
 
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Dronpa is a  reversible photoswitchable fluorescent protein that is switched on by default “fluorescent” and is switched off when illuminated by cyan light (~500nm). Dronpa Fluorescence is recovered by shining violet light (~400nm). And has been used in a design that facilitates the optical control of protein activities
 
Dronpa is a  reversible photoswitchable fluorescent protein that is switched on by default “fluorescent” and is switched off when illuminated by cyan light (~500nm). Dronpa Fluorescence is recovered by shining violet light (~400nm). And has been used in a design that facilitates the optical control of protein activities
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This mutant version of Dronpa has showed a better performance than the wild type in controling the activity of both TetR [fig1] and β-galactosidase[fig 3], the work flow of the  β-galactosidase activity experiment is indicated in figure 2  </p>
 
This mutant version of Dronpa has showed a better performance than the wild type in controling the activity of both TetR [fig1] and β-galactosidase[fig 3], the work flow of the  β-galactosidase activity experiment is indicated in figure 2  </p>
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<img src="https://static.igem.org/mediawiki/2017/e/e2/Logic_tetR_PB.png">
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<img src="https://static.igem.org/mediawiki/2017/8/8e/Logic_P22c2_PB.png">
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<img src="https://static.igem.org/mediawiki/2017/1/19/Logic_HKcIfigure_PB.png">
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                                            <b>Figure 1:Results of the cell-free experiment. Each promoter was tested with its cognate repressors. Top: Testing with TetR caged with either wt-Dronpa (BBa_K2510108) or a mutated version(BBa_K2510109)Middle: Testing with P22c2 caged with either wt-Dronpa (BBa_K2510112) or a mutated version(BBa_K2510113).Bottom: Testing with HKcI caged with either wt-Dronpa (BBa_K2510110) or a mutated version(BBa_K2510111)
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Revision as of 03:13, 2 November 2017

IMPROVED PARTS

Part improved part:BBa_K1680006

Dronpa is a reversible photoswitchable fluorescent protein that is switched on by default “fluorescent” and is switched off when illuminated by cyan light (~500nm). Dronpa Fluorescence is recovered by shining violet light (~400nm). And has been used in a design that facilitates the optical control of protein activities This part contains a device of two copies of Dronpa Fluorescent Protein that are codon optimized for E Coli with two BsaI cutting site in between to allow the insertion of various proteins to be tested . This coding sequence of the 2 dronpa domains has 2 mutations I4V and R149H in the first dronpa domain and an F78S mutation in the second domain that were obtained by error prone PCR. This mutant version of Dronpa has showed a better performance than the wild type in controling the activity of both TetR [fig1] and β-galactosidase[fig 3], the work flow of the β-galactosidase activity experiment is indicated in figure 2

Figure 1:Results of the cell-free experiment. Each promoter was tested with its cognate repressors. Top: Testing with TetR caged with either wt-Dronpa (BBa_K2510108) or a mutated version(BBa_K2510109)Middle: Testing with P22c2 caged with either wt-Dronpa (BBa_K2510112) or a mutated version(BBa_K2510113).Bottom: Testing with HKcI caged with either wt-Dronpa (BBa_K2510110) or a mutated version(BBa_K2510111) Figure 2: An overview of the experiment done to evaluate the activity of β-galactosidase-Dronpa fusion. Figure 3: X-Gal grayscale picture, testing the activity of β-galactosidase fusion with both wtDronpa and mutDronpa, indicating that β-galactosidase-mutDronpa fusion is more responsive to cyan light than the β-galactosidase-wtDronp.

Centre for Research and Interdisciplinarity (CRI)
Faculty of Medicine Cochin Port-Royal, South wing, 2nd floor
Paris Descartes University
24, rue du Faubourg Saint Jacques
75014 Paris, France
bettencourt.igem2017@gmail.com