Difference between revisions of "Team:York"

 
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                <br style = “line-height:20px;”><br>
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                <h1 style="-webkit-text-stroke: 2px black; color:#fff;">iGEM York 2017</h1>
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                <h1 style="-webkit-text-stroke: 2px black; color:#fff;">DIHM Assisted Co-culture Optimisation</h1>
 
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                    <h1 class="section-heading" style="margin-bottom:-15px;">QWACC: a Quicker Way to Analyse Co-Cultures</h1>
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                    <h4 class="section-subheading">Contact us: <b><a class="text-muted" href="mailto:igemyork@gmail.com" style="color: #000;">igemyork@gmail.com</a></b></h4>
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                        <a href="//www.facebook.com/igemyork/"><img class="social-top social-top-facebook" src="//2017.igem.org/wiki/images/0/0c/Icon-facebook.png" width="32px" height="32px"></a>
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                        <a href="//twitter.com/igemyork?lang=en"><img class="social-top social-top-twitter" src="//2017.igem.org/wiki/images/6/6f/Icon-twitter.png" width="32px" height="32px"></a>
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                        <a href="//www.instagram.com/igemyork/"><img class="social-top social-top-instagram" src="//2017.igem.org/wiki/images/5/51/Icon-instagram.png" width="32px" height="32px"></a>
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                        <a href="//2017.igem.org/Team:York/Results#Modifying-Chlamydomonas">
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                        <img class="Iconlink" src="//2017.igem.org/wiki/images/1/1c/TeamYork-BiologyIcon.png" width="100px" height="100px">
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                    <h4 class="service-heading">Biology</h4>
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                    <p class="text-muted" style="font-size:0.8em; text-align: center; margin-right: 5px; margin-left: 5px;">Genetically engineering <em>C. reinhardtii</em> and <em>E. coli</em> in order to form a co-culture with industrial potentials. </p>
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                        <a href="//2017.igem.org/Team:York/Hardware">
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                     <h4 class="service-heading">Hardware</h4>
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                <a href="https://2017.igem.org/Team:York">Team</a>
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                     <p class="text-muted" style="font-size:0.8em; text-align: center; margin-right: 5px; margin-left: 5px;">Using optical diffraction to create and probe 3D images through holography in order to monitor co-cultures.</p>
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                    <li><a href="https://2017.igem.org/Team:York">Team Bio</a></li>
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                    <li><a href="https://2017.igem.org/Team:York">Collaborations</a></li>
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                        <a href="//2017.igem.org/Team:York/Software">
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                    <li><a href="https://2017.igem.org/Team:York">Attributions</a></li>
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                     <li><a href="https://2017.igem.org/Team:York">Acknowledgements</a></li>
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                     <li><a href="https://2017.igem.org/Team:York">Sponsors</a></li>
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                     <h4 class="service-heading">Software</h4>
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                     <p class="text-muted" style="font-size:0.8em; text-align: center; margin-right: 5px; margin-left: 5px;">Cell counting and analysis using holograms formed from images taken with our hardware.</p>
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                 <a href="https://2017.igem.org/Team:York/Project">Project</a>
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                    <li><a href="https://2017.igem.org/Team:York/Project/Project Description">Project Description</a></li>
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                    <li><a href="https://2017.igem.org/Team:York/Project/Modeling">Modeling</a></li>
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                    <li><a href="https://2017.igem.org/Team:York/Project/Software">Software</a></li>
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                     <li><a href="https://2017.igem.org/Team:York/Project/Hardware">Hardware</a></li>
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                     <li><a href="https://2017.igem.org/Team:York/Project/Interlab_Measurement_Study">Interlab Measurement Study</a></li>
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      <h1>The Project</h1>
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      <p style="text-align: center; font-size: 20px;">Upon being asked to find the number of microorganisms in a given sample, the response from members of our iGEM team has invariably been a long sigh and a plea to the realms of the supernatural. <br><br>That most human quality - laziness - alongside flaws in traditional techniques, which we will revisit below, has led to us designing a potential solution in the form of a Digital Inline Holographic Microscope (DIHM). <br><br>In particular, we discovered that, when studying co-cultures, there are precious few methods of counting cells that are accurate, fast, cheap and non-destructive. <br><br>We decided, therefore, to try to bring together two promising areas of science in this project: <br>Digital Holographic Microscopy and Co-Culturing.</p>
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                <a href="https://2017.igem.org/Team:York/Results">Results</a>
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                    <li><a href="https://2017.igem.org/Team:York/Results">Results</a></li>
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                    <li><a href="https://2017.igem.org/Team:York/Project/BioBrick">BioBrick</a></li>
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                    <li><a href="https://2017.igem.org/Team:York/Results/Judging">Judging</a></li>
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                <a href="https://2017.igem.org/Team:York/Notebook/Protocols">Notebook</a>
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                    <li><a href="https://2017.igem.org/Team:York/Notebook/Safety">Safety</a></li>
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                    <li><a href="https://2017.igem.org/Team:York/Notebook/Protocols">Protocols</a></li>
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                <a href="https://2017.igem.org/Team:York/Human_Practice">Human Practice</a>
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                    <li><a href="https://2017.igem.org/Team:York/Human_Practice/Meetups">Meet ups</a></li>
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                    <li><a href="https://2017.igem.org/Team:York/Human_Practice/iGEM_School">iGEM@Open Day</a></li>
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                    <li><a href="https://2017.igem.org/Team:York/Human_Practice/SynBio">Workshops</a></li>
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                    <li><a href="https://2017.igem.org/Team:York/Human_Practice/Gold_Integrated">Integrated Human Practices</a>
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<h1> Welcome to iGEM 2017! </h1>
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<p>Your team has been approved and you are ready to start the iGEM season! </p>
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<h5>Before you start: </h5>
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<p> Please read the following pages:</p>
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<li>  <a href="https://2017.igem.org/Competition">Competition Hub</a> </li>
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<li> <a href="https://2017.igem.org/Competition/Deliverables/Wiki">Wiki Requirements page</a></li>
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<li> <a href="https://2017.igem.org/Resources/Template_Documentation">Template documentation</a></li>
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<p>You may style this page as you like or you can simply leave the style as it is. You can easily keep the styling and edit the content of these default wiki pages with your project information and completely fulfill the requirement to document your project.</p>
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      <h1>Our Work</h1>
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<p>While you may not win Best Wiki with this styling, your team is still eligible for all other awards. This default wiki meets the requirements, it improves navigability and ease of use for visitors, and you should not feel it is necessary to style beyond what has been provided.</p>  
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      <p style="font-size: 18px; text-align: center;">To easily find our achievements with respect to the iGEM 2017 competition, please see our <a style="color: #0000ff;" href="//2017.igem.org/Team:York/Achievements">Achievements</a> page for a list of direct links.</p>
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<h5> Wiki template information </h5>
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<p>We have created these wiki template pages to help you get started and to help you think about how your team will be evaluated. You can find a list of all the pages tied to awards here at the <a href="https://2017.igem.org/Judging/Pages_for_Awards">Pages for awards</a> link. You must edit these pages to be evaluated for medals and awards, but ultimately the design, layout, style and all other elements of your team wiki is up to you!</p>
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<p>On this page you can document your project, introduce your team members, document your progress and share your iGEM experience with the rest of the world! </p>
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<p> <a href="https://2017.igem.org/wiki/index.php?title=Team:Example&action=edit"> </a>Use WikiTools - Edit in the black menu bar to edit this page</p>
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<h5>Tips</h5>
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<li>You have a global audience! Consider the different backgrounds that your users come from.</li>
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<li>Make sure information is easy to find; nothing should be more than 3 clicks away.  </li>
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<li>Start documenting your project as early as possible; don’t leave anything to the last minute before the Wiki Freeze. For a complete list of deadlines visit the <a href="https://2017.igem.org/Calendar">iGEM 2017 calendar</a> </li>
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<li>Have lots of fun! </li>
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<h5>Inspiration</h5>
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<li> <a href="https://2014.igem.org/Team:SDU-Denmark/"> 2014 SDU Denmark </a> </li>
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<li> <a href="https://2014.igem.org/Team:LMU-Munich">2014 LMU-Munich</a> </li>
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<li> <a href="https://2014.igem.org/Team:Michigan"> 2014 Michigan</a></li>
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{{:Team:York/Templates/Footer}}

Latest revision as of 01:49, 31 October 2017

YORK


iGEM York 2017

DIHM Assisted Co-culture Optimisation

QWACC: a Quicker Way to Analyse Co-Cultures

Contact us: igemyork@gmail.com

Biology

Genetically engineering C. reinhardtii and E. coli in order to form a co-culture with industrial potentials.

Hardware

Using optical diffraction to create and probe 3D images through holography in order to monitor co-cultures.

Software

Cell counting and analysis using holograms formed from images taken with our hardware.


The Project


Upon being asked to find the number of microorganisms in a given sample, the response from members of our iGEM team has invariably been a long sigh and a plea to the realms of the supernatural.

That most human quality - laziness - alongside flaws in traditional techniques, which we will revisit below, has led to us designing a potential solution in the form of a Digital Inline Holographic Microscope (DIHM).

In particular, we discovered that, when studying co-cultures, there are precious few methods of counting cells that are accurate, fast, cheap and non-destructive.

We decided, therefore, to try to bring together two promising areas of science in this project:
Digital Holographic Microscopy and Co-Culturing.


Our Work

To easily find our achievements with respect to the iGEM 2017 competition, please see our Achievements page for a list of direct links.


  • ABOUT US
  • We are an overgraduate team representing the University of York.
  • Our Quicker Way to Analyse Co-Cultures (QWACC) is our entry into the Hardware track for iGEM 2017.
    •