Difference between revisions of "Team:William and Mary/Attributions"

 
(84 intermediate revisions by 4 users not shown)
Line 4: Line 4:
 
{{Team:William_and_Mary/HEADER2}}
 
{{Team:William_and_Mary/HEADER2}}
  
−
<!--website by John Mitchell, iGEM 2016
 
−
Bootstrap template by creative-tim-->
 
  
 
<html lang="en">
 
<html lang="en">
 
<cfheader name="X-XSS-Protection" value="1">
 
<cfheader name="X-XSS-Protection" value="1">
 +
 +
<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/4.7.0/css/font-awesome.min.css">
 +
<link href="https://fonts.googleapis.com/css?family=PT+Sans" rel="stylesheet">
 
          
 
          
−
         <div class="wrapper">
+
          
−
+
 
−
<div class="section section-numbers-2" id="numbers2" style="padding-top: 0px !important; border-top: 0px !important; margin-top: 0px !important;">
+
<style>
−
  <div class="parallaxWM pattern-image">
+
      body {
−
  <img alt="..." src="https://static.igem.org/mediawiki/2016/c/ce/T--William_and_Mary--rubik-background.jpg"/>
+
        font-family: 'PT Sans', sans-serif;
−
  </div>
+
        font-size: 13px;
−
  <div class="container">
+
      }
−
<div class="col-md-8 col-md-offset-2 text-center">
+
 
−
<div class="description">
+
</style>
−
<div class="title">
+
 
−
<h2 style='padding-top: 40px; font-family: "Verlag-Book"; font-size: 50px;'>
+
</head>
−
Attributions
+
 
−
</h2>
+
 
−
</div>
+
<body>
−
</div>
+
 
−
</div>
+
<div style='padding-top: 50px;'></div>
−
  <div class="clearfix"></div>
+
<center>
−
  </div>
+
<img src="https://static.igem.org/mediawiki/2017/0/0c/T--William_and_Mary--attributions39.jpeg" width=300px;/></center>
−
</div>
+
 
−
<div class="section section-we-are-2">
+
 
−
<div class="text-area">
+
 
−
<div class="container">
+
 
−
<div class="row">
+
 
−
<div class="description">
+
 
−
<p class='large'>
+
<div style='padding-top: 40px;'></div>
−
We've made it a long way since the summer began, and we could not have done it without
+
 
−
the numerous people and organizations that supported us.
+
<center>
−
</p>
+
<div style = 'padding-right: 200px; padding-left: 200px; font-size: 20px' >We would like to thank all of those who have supported and assisted us since the inception of our project. Without their help, this project wouldn't have been possible.</div> </center>
−
<p class='large'>
+
 
−
First and foremost, we would like to thank our two team advisors, Dr. Margaret Saha, PI, and Dr. Gregory Smith,
+
<div style='padding-top: 70px;'></div>
−
Co-PI. For her countless hours of time and unbounded dedication to our cause, we extend our sincerest thanks to
+
 
−
Dr. Saha. We would also like to extend a special thanks to Dr. Smith for his expertise in mathematical modeling  
+
<div style = 'padding-left: 190px; padding-bottom: 10px;font-size: 25px' ><b>General Support</b></div>
−
and his willingness to advise our math team. In addition, we offer our thanks to the Vice Provost for Research,
+
 
−
Dr. Dennis Manos, who has provided strong support, financial and intellectual, for iGEM and the BioEngineering
+
<div style='background: #808080; margin: 0px 190px 20px 190px; height:1px;></div>
−
Initiative at William and Mary. We also thank Dr. Eric Bradley for his endless assistance with facilities and  
+
 
−
equipment. Finally, we thank Dr. Mark Forsyth, Dr. Helen Murphy, Dr. Bev Sher, and Dr. Doug Young for their
+
<div style = 'padding-right: 190px; padding-left: 190px; text-indent: 50px;line-height: 30px;' >We would like to extend our sincerest thanks to our team advisor and PI, Dr. Margaret Saha. Her endless dedication and enthusiasm towards our research and well-being could not be more greatly appreciated.
−
advice on the project.
+
We would like to thank Dr. Gregory Smith, Co-PI, for his mathematical modeling expertise and his general advisement of our math team. We also want to thank Dr. Eric Bradley for his tireless assistance with lab facilities and management. </div>
−
</p>
+
 
−
+
 
−
<div align="center">
+
<div style='padding-top: 140px;'></div>
−
<h3 style='padding-top: 50px; padding-bottom: 50px;'>Funding Support</h3>
+
 
−
</div>
+
 
−
+
<div style = 'padding-left: 190px; padding-bottom: 10px;font-size: 25px' ><b>Modeling Support</b></div>
−
<p class='large' style='padding-bottom: 50px;'>
+
 
−
We would also like to thank the following organizations and offices which have generously provided us with the
+
<div style='background: #808080; margin: 0px 190px 20px 190px; height:1px;></div>
−
financial support necessary to carry out our project, in terms of either supplies or summer stipends.
+
 
−
</p>
+
<div style = 'padding-right: 190px; padding-left: 190px;line-height: 30px; text-indent: 50px;' >We'd like to extend our thanks to our student advisor John Marken, PhD student, for finding time in his busy schedule to provide us with assistance in our mathematical modeling and data analysis. His guidance during brainstorming was also pivotal in determining our project idea.
−
<p class='large' style='text-align: center !important;'>
+
We would also like to sincerely thank Andy Halleran, PhD student, for his invaluable advice throughout the summer. </div> </div>
−
Office of the Vice Provost for Research and Graduate Studies
+
 
−
</p>
+
<div style='padding-top: 140px;'></div>
−
<p class='large' style='text-align: center !important;'>
+
 
−
William & Mary Dean of Arts & Sciences
+
 
−
</p>
+
<div style = 'padding-left: 190px; padding-bottom: 10px;font-size: 25px' ><b>Microscopy Support</b></div>
−
<p class='large' style='text-align: center !important;'>
+
 
−
William & Mary Roy R. Charles Center
+
<div style='background: #808080; margin: 0px 190px 20px 190px; height:1px;></div>
−
</p>
+
 
−
<p class='large' style='text-align: center !important;'>
+
<div style = 'padding-right: 190px; padding-left: 190px;line-height: 30px; text-indent: 50px;' >We would like to thank Dr. Dennis Manos, Vice Provost of Research, for making our scope experiments possible. We also want to thank Dr. Abigail Reft, Dr. Matthew Wawersik, Dr. Jennifer Rahn, Mark Pownall, and Sudip Paudel for their generous suggestions and help with microscopy troubleshooting. </div> </div>
−
William and Mary Office of Student Leadership Development
+
 
−
</p>
+
 
−
<p class='large' style='text-align: center !important;'>
+
<div style='padding-top: 140px;'></div>
−
EXTREEMS-QED(NSF)
+
 
−
</p>
+
<div style = 'padding-left: 190px; padding-bottom: 10px;font-size: 25px' ><b>Human Practices Support</b></div>
−
<p class='large' style='text-align: center !important;'>
+
 
−
HHMI Undergraduate Science Education Grant
+
<div style='background: #808080; margin: 0px 190px 20px 190px; height:1px;></div>
−
</p>
+
 
−
<p class='large' style='text-align: center !important;'>
+
 
−
Arnold and Mabel Beckman Foundation
+
<div style = 'padding-right: 190px; padding-left: 190px;line-height: 30px;' >We would like to thank the following people for their extensive support in our human practices efforts:</div>
−
</p>
+
 
−
<p class='large' style='text-align: center !important;'>
+
<div style='padding-top: 20px;padding-left: 190px;></div>
−
1693 Scholar Program
+
 
−
</p>
+
<div style = 'padding-right: 190px; padding-left: 190px;line-height: 30px; '>Virginia Senator Monty Mason, for expressing interest in our project and human practices, and providing vital connections to local school systems.</div>
−
<p class='large' style='text-align: center !important;'>
+
<div style = 'padding-right: 190px; padding-left: 190px;line-height: 30px; '>Dr. Hannes Schniepp, Dr. Oliver Kerscher, and Dr. Joshua Puzey for participating in our Bioengineering Speaker Series.</div>  
−
James Monroe Scholar Program
+
<div style = 'padding-right: 190px; padding-left: 190px;line-height: 30px; '>Greg Marsh, Mihyeon Kim, and Kelley Clark from the William & Mary School of Education, for providing advice and feedback to guide our outreach efforts for the summer.</div>
−
</p>
+
<div style = 'padding-right: 190px; padding-left: 190px;line-height: 30px; '>Kristin Cosby and Tami Byron for connecting us with local school systems and providing consultation regarding teacher resources. </div>
−
<p class='large' style='text-align: center !important;'>
+
<div style = 'padding-right: 190px; padding-left: 190px;line-height: 30px; '>Jacqueline Brooks, for assisting in organization of our Synthetic Engineering Girl Scout event.</div>
−
Donors to our Experiment Page
+
<div style = 'padding-right: 190px; padding-left: 190px;line-height: 30px; '>Deanna Marroletti, for assisting in organization of our Camp Launch event and providing critical feedback after the event.</div>
−
</p>
+
<div style = 'padding-right: 190px; padding-left: 190px;line-height: 30px; '>Monica Griffin, for her valuable advice regarding Outreach Database organization and implementation.</div>
−
+
<div style = 'padding-right: 190px; padding-left: 190px;line-height: 30px; '>And our PI, Dr. Margaret Saha, for her unwavering support and endless enthusiasm for our Human Practices projects.</div>
−
<!--SPONSOR LINKS HERE-->
+
 
−
<p style="text-align: center; padding-top: 30px; padding-bottom: 30px;">
+
<div style='padding-top: 140px;'></div>
−
<img src="https://static.igem.org/mediawiki/2016/c/cd/T--William_and_Mary--wm_logo.png" width=300">
+
 
−
<img src="https://static.igem.org/mediawiki/2016/9/94/T--William_and_Mary--HHMI.jpg" width="300">
+
<div style = 'padding-left: 190px; padding-bottom: 10px;font-size: 25px' ><b>Funding</b></div>
−
<img src="https://static.igem.org/mediawiki/2016/1/14/T--William_and_Mary--Beckman.jpg" width="300">
+
 
−
</p>
+
<div style='background: #808080; margin: 0px 190px 20px 190px; height:1px;></div>
−
<div align="center">
+
 
−
<h3 style='padding-top: 50px; padding-bottom: 50px;'>Corporate Sponsors:</h3></div>
+
<div style = 'padding-right: 190px; padding-left: 190px;line-height: 30px; text-indent: 50px;'>First and foremost, we would like to thank Dr. Dennis Manos again for providing us with vital financial and intellectual support. We would also like to thank the following organizations and offices for generously providing us with the financial support necessary for realizing our project: </div>
−
<p style="text-align: center; padding-top: 30px; padding-bottom: 30px;">
+
 
−
<img src="https://static.igem.org/mediawiki/2016/5/5e/T--William_and_Mary--Macrogen.png" width="250">
+
 
−
<img src="https://static.igem.org/mediawiki/2016/4/4c/T--William_and_Mary--IDT_logo.jpg" width="250">
+
<div style='padding-top: 90px;padding-left: 30%'></div>
−
<img src="https://static.igem.org/mediawiki/2016/e/ed/T--William_and_Mary--BWB_logo.png" width="250">
+
 
−
<img src="https://static.igem.org/mediawiki/2016/b/b9/T--William_and_Mary--Experiment_logo.png" width="250">
+
<div style = 'padding-right: 190px; padding-left: 190px;line-height: 30px;'>Dean Kate Conley, Dean of the Faculty, Arts and Sciences</div>
−
</p>
+
<div style = 'padding-right: 190px; padding-left: 190px;line-height: 30px;'>Howard Hughes Medical Institute Science Education Grant to the College of William and Mary</div>
−
+
<div style = 'padding-right: 190px; padding-left: 190px;line-height: 30px;'>GenScript  </div>
−
</div>
+
<div style = 'padding-right: 190px; padding-left: 190px;line-height: 30px;'>Epoch Life Science Inc.</div>
−
</div>
+
<div style = 'padding-right: 190px; padding-left: 190px;line-height: 30px;'>Integrated DNA Technologies</div>
−
</div>
+
 
−
</div>
+
<div style='padding-top: 60px;'></div>
−
</div>
+
 
−
<div align="center">
+
<center>
−
<h3 style='padding-top: 50px; padding-bottom: 50px;'>References</h3>
+
<figure style='padding-left: px;'>
−
</div>
+
<img src='https://static.igem.org/mediawiki/2017/3/37/T--William_and_Mary--Sponsors.png' width = "60%"/>
−
<p class='large' style="padding-left:70px; padding-bottom: 30px;">
+
</figure>
−
<b>1.</b> Nielsen, A. A., Segall-Shapiro, T. H., & Voigt, C. A. (2013). Advances in genetic circuit design:
+
</center>
−
Novel biochemistries, deep part mining, and precision gene expression. Current Opinion in Chemical Biology,
+
<div style='padding-top: 40px;'></div>
−
17(6), 878-892. doi:<a>http://dx.doi.org/10.1016/j.cbpa.2013.10.003</a>
+
<center>
−
</p>
+
<div style = 'padding-bottom: 10px;font-size: 17px' >Corporate Sponsors:</></div></center>
−
<p class='large' style="padding-left:70px; padding-bottom: 30px;">
+
 
−
<b>2.</b> Sun, Z. Z., Yeung, E., Hayes, C. A., Noireaux, V., & Murray, R. M.Linear DNA for rapid prototyping of
+
<div style='padding-top: 5px;'></div>
−
synthetic biological circuits in an escherichia coli based TX-TL cell-free system. ACS Synthetic Biology, (6), 387.
+
<center>
−
doi:10.1021/sb400131a
+
<figure style='padding-left: px;'>
−
</p>
+
<img src='https://static.igem.org/mediawiki/2017/6/6b/T--William_and_Mary--CorporateSponsors.png' width = "60%"/>
−
<p class='large' style="padding-left:70px; padding-bottom: 30px;">
+
</figure></center>
−
<b>3.</b> Lucks, J. B., Qi, L., Whitaker, W. R., & Arkin, A. P. (2008). Toward scalable parts families for predictable
+
 
−
design of biological circuits. Current Opinion in Microbiology, 11(6), 567-573. doi:<a>http://dx.doi.org/10.1016/j.mib.2008.10.002</a>
+
<br>
−
</p>
+
</br>
−
<p class='large' style="padding-left:70px; padding-bottom: 30px;">
+
 
−
<b>4.</b> Lou, C., Stanton, B., Chen, Y., Munsky, B., & Voigt, C. A. (2012). Ribozyme-based insulator parts buffer
+
 
−
synthetic circuits from genetic context. Nature Biotechnology, (30), 1137-1142.
+
 
−
</p>
+
</body>
−
<p class='large' style="padding-left:70px; padding-bottom: 30px;">
+
 
−
<b>5.</b> Amit, R., Garcia, H. G., Phillips, R. & Fraser, S. E. Building enhancers from the ground up: a synthetic biology approach. Cell 146, 105–118 (2011).
+
 
−
</p>
+
 
−
<p class='large' style="padding-left:70px; padding-bottom: 30px;">
+
−
<b>6.</b> Brewster, R. C., Weinert, F. M., Garcia, H. G., Song, D., Rydenfelt, M., & Phillips, R. (2014). The transcription factor titration effect dictates level of gene expression. Cell, 156(6), 1312. doi:10.1016/j.cell.2014.02.022
+
−
</p>
+
−
<p class='large' style="padding-left:70px; padding-bottom: 30px;">
+
−
<b>7.</b> Castillo-Hair, S. M., Sexton, J. T., Landry, B. P., Olson, E. J., Igoshin, O. A., & Tabor, J. J. (2016). FlowCal: A user-friendly, open source software tool for automatically converting flow cytometry data from arbitrary to calibrated units. ACS synthetic biology.
+
−
</p>
+
−
<p class='large' style="padding-left:70px; padding-bottom: 30px;">
+
−
<b>8.</b> Daniel, R., Rubens, J. R., Sarpeshkar, R., & Lu, T. K. (2013). Synthetic analog computation in living cells.Nature, 497, 619-623. doi:doi:10.1038/nature12148
+
−
</p>
+
−
<p class = 'large' style="padding-left:70px; padding-bottom: 30px;"> <b>9.</b> Milo, R., Phillips, R., & Orme, N. (2015). Cell biology by the numbers. Garland Science
+
−
</p>
+
−
<p class='large' style="padding-left:70px; padding-bottom: 30px;">
+
−
<b>10.</b> Nielsen, A. A., Segall-Shapiro, T. H., & Voigt, C. A. (2013). Advances in genetic circuit design: Novel biochemistries, deep part mining, and precision gene expression. Current Opinion in Chemical Biology, 17(6), 878-892. doi:http://dx.doi.org/10.1016/j.cbpa.2013.10.003
+
−
</p>
+
−
<p class='large' style="padding-left:70px; padding-bottom: 30px;">
+
−
<b>11.</b> Pothoulakis, G., Ceroni, F., Reeve, B., & Ellis, T. (2014). The spinach RNA aptamer as a characterization tool for synthetic biology. ACS Synthetic Biology, 3(3), 182-187. doi:10.1021/sb400089c
+
−
</p>
+
−
<p class='large' style="padding-left:70px; padding-bottom: 30px;">
+
−
<b>12.</b> So LH, Ghosh A, Zong C, Sepu´lveda LA, Segev R, Golding I. General properties of transcriptional time series in Escherichia coli. Nat Genet. 2011 Jun43(6):554-60
+
−
</p>
+
−
<p class='large' style="padding-left:70px; padding-bottom: 30px;">
+
−
<b>13.</b> Torella, J. P., Boehm, C. R., Lienert, F., Chen, J., Way, J. C., & Silver, P. A. (2014). Rapid construction of insulated genetic circuits via synthetic sequence-guided isothermal assembly. Nucleic Acids Research,42(1), 681-689. doi:doi:10.1093/nar/gkt860
+
−
</p>
+
−
<p class='large' style="padding-left:70px; padding-bottom: 30px;">
+
−
<b>14.</b> Briggs, A. W., Rios, X., Chari, R., Yang, L., Zhang, F., Mali, P., & Church, G. M. (2012). Iterative capped assembly: rapid and scalable synthesis of repeat-module DNA such as TAL effectors from individual monomers. Nucleic Acids Research, 40(15), e117. http://doi.org/10.1093/nar/gks624
+
−
</p>
+
−
</div>
+
  
  
 
</html>
 
</html>
 +
  
 
{{Team:William_and_Mary/JS_SOURCE2}}
 
{{Team:William_and_Mary/JS_SOURCE2}}
 
{{Team:William_and_Mary/FOOTER_SMALL}}
 
{{Team:William_and_Mary/FOOTER_SMALL}}

Latest revision as of 03:47, 2 November 2017


We would like to thank all of those who have supported and assisted us since the inception of our project. Without their help, this project wouldn't have been possible.
General Support
We would like to extend our sincerest thanks to our team advisor and PI, Dr. Margaret Saha. Her endless dedication and enthusiasm towards our research and well-being could not be more greatly appreciated. We would like to thank Dr. Gregory Smith, Co-PI, for his mathematical modeling expertise and his general advisement of our math team. We also want to thank Dr. Eric Bradley for his tireless assistance with lab facilities and management.
Modeling Support
We'd like to extend our thanks to our student advisor John Marken, PhD student, for finding time in his busy schedule to provide us with assistance in our mathematical modeling and data analysis. His guidance during brainstorming was also pivotal in determining our project idea. We would also like to sincerely thank Andy Halleran, PhD student, for his invaluable advice throughout the summer.
Microscopy Support
We would like to thank Dr. Dennis Manos, Vice Provost of Research, for making our scope experiments possible. We also want to thank Dr. Abigail Reft, Dr. Matthew Wawersik, Dr. Jennifer Rahn, Mark Pownall, and Sudip Paudel for their generous suggestions and help with microscopy troubleshooting.
Human Practices Support
We would like to thank the following people for their extensive support in our human practices efforts:
Virginia Senator Monty Mason, for expressing interest in our project and human practices, and providing vital connections to local school systems.
Dr. Hannes Schniepp, Dr. Oliver Kerscher, and Dr. Joshua Puzey for participating in our Bioengineering Speaker Series.
Greg Marsh, Mihyeon Kim, and Kelley Clark from the William & Mary School of Education, for providing advice and feedback to guide our outreach efforts for the summer.
Kristin Cosby and Tami Byron for connecting us with local school systems and providing consultation regarding teacher resources.
Jacqueline Brooks, for assisting in organization of our Synthetic Engineering Girl Scout event.
Deanna Marroletti, for assisting in organization of our Camp Launch event and providing critical feedback after the event.
Monica Griffin, for her valuable advice regarding Outreach Database organization and implementation.
And our PI, Dr. Margaret Saha, for her unwavering support and endless enthusiasm for our Human Practices projects.
Funding
First and foremost, we would like to thank Dr. Dennis Manos again for providing us with vital financial and intellectual support. We would also like to thank the following organizations and offices for generously providing us with the financial support necessary for realizing our project:
Dean Kate Conley, Dean of the Faculty, Arts and Sciences
Howard Hughes Medical Institute Science Education Grant to the College of William and Mary
GenScript
Epoch Life Science Inc.
Integrated DNA Technologies
Corporate Sponsors: