Microfluidic devices are often highly specific, performing entire specialized experiments on a chip. This means that these chips are not useful or relevant to an average member of the synthetic biology community.
With this in mind, we set out to make the MARS repository. This repository would consist of generalized microfluidic chips that could be useful to any synthetic biologist.
To determine what protocols synbiologist would find useful on a microfluidic devices, we reached out the the Biological Design Center located at Boston University. This community of synthetic biologists gave us insight as to what what procedures are performed every day in the average synbio lab. We were able to identify eight protocols integral to synthetic biology: Cell Lysis, DNA Digestion, Ligation, Transformation, PCR, Fluorescence Testing, Antibiotic Resistance Testing, and Cell Culturing. These eight protocols, as well as Cell Sorting, make up the nine chips currently located in the MARS repository.
Each of the nine chips located in the MARS repository are located within one of three subcategories:
Line 67: | Line 67: | ||
<div class="main main-raised" id = "main_text"> | <div class="main main-raised" id = "main_text"> | ||
<div class="container"> | <div class="container"> | ||
− | <h1 class="text-center"> | + | <h1 class="text-center"> The MARS Repository</h1> |
<div class="text_section col-md-12"> | <div class="text_section col-md-12"> | ||
<div class="text"> | <div class="text"> | ||
− | + | ||
− | + | Microfluidic devices are often highly specific, performing entire specialized experiments on a chip. This means that these chips are not useful or relevant to an average member of the synthetic biology community. | |
− | + | <br> | |
− | + | <br> | |
− | < | + | With this in mind, we set out to make the MARS repository. This repository would consist of generalized microfluidic chips that could be useful to any synthetic biologist. |
− | + | <br> | |
− | + | <br> | |
− | + | To determine what protocols synbiologist would find useful on a microfluidic devices, we reached out the the Biological Design Center located at Boston University. This community of synthetic biologists gave us insight as to what what procedures are performed every day in the average synbio lab. We were able to identify eight protocols integral to synthetic biology: Cell Lysis, DNA Digestion, Ligation, Transformation, PCR, Fluorescence Testing, Antibiotic Resistance Testing, and Cell Culturing. These eight protocols, as well as Cell Sorting, make up the nine chips currently located in the MARS repository. | |
− | + | ||
− | + | ||
<br> | <br> | ||
+ | <br> | ||
+ | Each of the nine chips located in the MARS repository are located within one of three subcategories: | ||
+ | <br> | ||
+ | <br></div> | ||
+ | <div class = "row" style="text-align: center"> | ||
+ | <img src="https://static.igem.org/mediawiki/2017/4/41/Isomodqua.png" > | ||
+ | </div> | ||
<br> | <br> | ||
− | + | <br><div class ="text"> | |
+ | These nine chips, each performing a basic individual protocol, can be combined together to perform more complex synthetic biology experiments. | ||
+ | <br> | ||
+ | <br> | ||
+ | Each chip is fully documented, providing all the necessary files for replication and usage. These files include: | ||
+ | </div> | ||
<ol> | <ol> | ||
− | < | + | <b><li>Design Files</li></b> |
− | + | <b><li>Manufacturing Specifications and Instructions</li></b> | |
− | <li> | + | <b><li>Usage and Testing protocols</li></b> |
− | <li> | + | </ol><div class = "text" style="margin-bottom:3%;"> |
− | </ol> | + | As well as other useful tools and resources to make them as accessible as possible. |
− | + | ||
<br> | <br> | ||
<br> | <br> | ||
− | + | These chips are currently in the water testing phase, but they provide a framework that can utilized and built upon by future iGEM teams and the synbio community to allow for biological testing and optimization. | |
</div> | </div> | ||
− | + | </div></div> | |
− | + | </div> | |
− | + | <div class="main main-raised" style="margin-top:5%" id="chips" > | |
− | + | <div class="container"> | |
− | + | <h1 class="text-center"> Explore the MARS Repository</h1> | |
− | + | <div class = "text" style="text-align: center">Click on each chip's image to be directed to its specific page!</div> | |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
<div class="col-md-12"> | <div class="col-md-12"> | ||
− | <div class="row"> | + | <div class="row" style="text-align: center" > |
− | <h3>< | + | <h3><b>Isolation</b></h3> |
<div class="column col-md-4"> | <div class="column col-md-4"> | ||
<a href="https://2017.igem.org/Team:BostonU_HW/Lysis"><img src="https://static.igem.org/mediawiki/2017/0/09/MARS_Matrix_Lysis.png" alt="Picture"></a> | <a href="https://2017.igem.org/Team:BostonU_HW/Lysis"><img src="https://static.igem.org/mediawiki/2017/0/09/MARS_Matrix_Lysis.png" alt="Picture"></a> | ||
Line 137: | Line 125: | ||
</div> | </div> | ||
</div> | </div> | ||
− | <div class="row"> | + | <div class="row" style="text-align: center" > |
− | <h3>< | + | <h3><b><br>Modification</b></h3> |
<div class="column col-md-4"> | <div class="column col-md-4"> | ||
<a href="https://2017.igem.org/Team:BostonU_HW/Transformation"><img src="https://static.igem.org/mediawiki/2017/5/5b/MARS_Matrix_Trans.png" alt="Picture"></a> | <a href="https://2017.igem.org/Team:BostonU_HW/Transformation"><img src="https://static.igem.org/mediawiki/2017/5/5b/MARS_Matrix_Trans.png" alt="Picture"></a> | ||
Line 152: | Line 140: | ||
</div> | </div> | ||
</div> | </div> | ||
− | <div class="row"> | + | <div class="row" style="text-align: center" > |
− | <h3>< | + | <h3><b><br>Quantification</b></h3> |
<div class="column col-md-4" style="margin-bottom:3%;"> | <div class="column col-md-4" style="margin-bottom:3%;"> | ||
<a href="https://2017.igem.org/Team:BostonU_HW/Antibiotic"><img src="https://static.igem.org/mediawiki/2017/c/cc/MARS_Matrix_AR.png" alt="Picture"></a> | <a href="https://2017.igem.org/Team:BostonU_HW/Antibiotic"><img src="https://static.igem.org/mediawiki/2017/c/cc/MARS_Matrix_AR.png" alt="Picture"></a> | ||
Line 163: | Line 151: | ||
</div> | </div> | ||
<div class="column col-md-4"> | <div class="column col-md-4"> | ||
− | <a href="https://2017.igem.org/Team:BostonU_HW/Culturing"><img src="https://static.igem.org/mediawiki/2017/f/fb/MARS_Matrix_CC.png" alt="Picture"></a> | + | <a href="https://2017.igem.org/Team:BostonU_HW/Culturing "><img src="https://static.igem.org/mediawiki/2017/f/fb/MARS_Matrix_CC.png" alt="Picture"></a> |
<h4 class="text-center">Cell Culturing</h4> | <h4 class="text-center">Cell Culturing</h4> | ||
</div> | </div> | ||
Line 171: | Line 159: | ||
</div> | </div> | ||
</div> | </div> | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
</div> | </div> | ||
− | |||
− | |||
</div> | </div> | ||
</body> | </body> |
Revision as of 20:05, 30 October 2017
The MARS Repository
These nine chips, each performing a basic individual protocol, can be combined together to perform more complex synthetic biology experiments.
Each chip is fully documented, providing all the necessary files for replication and usage. These files include:
Each chip is fully documented, providing all the necessary files for replication and usage. These files include:
- Design Files
- Manufacturing Specifications and Instructions
- Usage and Testing protocols
As well as other useful tools and resources to make them as accessible as possible.
These chips are currently in the water testing phase, but they provide a framework that can utilized and built upon by future iGEM teams and the synbio community to allow for biological testing and optimization.
These chips are currently in the water testing phase, but they provide a framework that can utilized and built upon by future iGEM teams and the synbio community to allow for biological testing and optimization.